RNA–Protein interactions for RNA: ENST00000438034.5

APOL1-210, Transcript of apolipoprotein L1, humanhuman

TSL 4

Gene APOL1, Length 566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOL1-210ENST00000438034 NISCHQ9Y2I1 1504 aa27.51■■□□□ 1.99
APOL1-210ENST00000438034 CCDC180Q9P1Z9 1646 aa24.49■■□□□ 1.51
APOL1-210ENST00000438034 ABCC9O60706 1549 aa23.99■■□□□ 1.43
APOL1-210ENST00000438034 RB1CC1Q8TDY2 1594 aa23.11■■□□□ 1.29
APOL1-210ENST00000438034 DCAF8L2P0C7V8 631 aa23.08■■□□□ 1.29
APOL1-210ENST00000438034 NACADO15069 1562 aa23.07■■□□□ 1.28
APOL1-210ENST00000438034 MYO15BQ96JP2 1530 aa22.93■■□□□ 1.26
APOL1-210ENST00000438034 ZCCHC6Q5VYS8 1495 aaKnown RBP22.9■■□□□ 1.26
APOL1-210ENST00000438034 DCAF1Q9Y4B6 1507 aa22.8■■□□□ 1.24
APOL1-210ENST00000438034 UNC13AQ9UPW8 1703 aa22.41■■□□□ 1.18
APOL1-210ENST00000438034 PABPN1Q86U42 306 aaKnown RBP eCLIP22.4■■□□□ 1.18
APOL1-210ENST00000438034 SCRIBQ14160 1630 aa22.3■■□□□ 1.16
APOL1-210ENST00000438034 BICRAQ9NZM4 1560 aa22.29■■□□□ 1.16
APOL1-210ENST00000438034 SHROOM4Q9ULL8 1493 aa22.22■■□□□ 1.15
APOL1-210ENST00000438034 DNAJC5BQ9UF47 199 aa21.98■■□□□ 1.11
APOL1-210ENST00000438034 EIF4G1Q04637 1599 aaKnown RBP21.78■■□□□ 1.08
APOL1-210ENST00000438034 CC2D2AQ9P2K1 1620 aa21.68■■□□□ 1.06
APOL1-210ENST00000438034 CECR2Q9BXF3 1484 aa21.59■■□□□ 1.05
APOL1-210ENST00000438034 BAZ1AQ9NRL2 1556 aaPredicted RBP21.37■■□□□ 1.01
APOL1-210ENST00000438034 SMARCA4P51532 1647 aa21.33■■□□□ 1.01
APOL1-210ENST00000438034 SMARCA2P51531 1590 aa21.28■■□□□ 1
APOL1-210ENST00000438034 NCAPD3P42695 1498 aa21.27■■□□□ 1
APOL1-210ENST00000438034 ATAD2BQ9ULI0 1458 aa21.26■□□□□ 0.99
APOL1-210ENST00000438034 HMGXB3Q12766 1538 aa21.16■□□□□ 0.98
APOL1-210ENST00000438034 MROH2BQ7Z745 1585 aa21.15■□□□□ 0.98
APOL1-210ENST00000438034 PEG3Q9GZU2 1588 aa21.14■□□□□ 0.98
APOL1-210ENST00000438034 BAZ1BQ9UIG0 1483 aaKnown RBP21.12■□□□□ 0.97
APOL1-210ENST00000438034 RSF1Q96T23 1441 aaPredicted RBP20.94■□□□□ 0.94
APOL1-210ENST00000438034 WIZO95785 1651 aa20.9■□□□□ 0.94
APOL1-210ENST00000438034 ERCC6Q03468 1493 aa20.76■□□□□ 0.91
APOL1-210ENST00000438034 TOP2AP11388 1531 aaKnown RBP20.75■□□□□ 0.91
APOL1-210ENST00000438034 LAMC3Q9Y6N6 1575 aa20.73■□□□□ 0.91
APOL1-210ENST00000438034 NESP48681 1621 aa20.69■□□□□ 0.9
APOL1-210ENST00000438034 CADPSQ9ULU8 1353 aa20.67■□□□□ 0.9
APOL1-210ENST00000438034 PDS5BQ9NTI5 1447 aa20.65■□□□□ 0.9
APOL1-210ENST00000438034 CUX2O14529 1486 aa20.54■□□□□ 0.88
APOL1-210ENST00000438034 CFTRP13569 1480 aa20.51■□□□□ 0.87
APOL1-210ENST00000438034 CCDC88BA6NC98 1476 aa20.49■□□□□ 0.87
APOL1-210ENST00000438034 KIF21AQ7Z4S6 1674 aa20.43■□□□□ 0.86
APOL1-210ENST00000438034 SUPT5HO00267 1087 aaKnown RBP20.42■□□□□ 0.86
APOL1-210ENST00000438034 CEP164Q9UPV0 1460 aa20.42■□□□□ 0.86
APOL1-210ENST00000438034 FANCD2Q9BXW9 1451 aa20.41■□□□□ 0.86
APOL1-210ENST00000438034 THOC2Q8NI27 1593 aaKnown RBP20.4■□□□□ 0.86
APOL1-210ENST00000438034 MRC2Q9UBG0 1479 aa20.38■□□□□ 0.85
APOL1-210ENST00000438034 PRDM2Q13029 1718 aa20.29■□□□□ 0.84
APOL1-210ENST00000438034 WDR62O43379 1518 aa20.28■□□□□ 0.84
APOL1-210ENST00000438034 ABCC8Q09428 1581 aa20.17■□□□□ 0.82
APOL1-210ENST00000438034 URB2Q14146 1524 aaKnown RBP20.16■□□□□ 0.82
APOL1-210ENST00000438034 TOPBP1Q92547 1522 aa20.06■□□□□ 0.8
APOL1-210ENST00000438034 DNMBPQ6XZF7 1577 aa20.05■□□□□ 0.8
APOL1-210ENST00000438034 IFT140Q96RY7 1462 aa20■□□□□ 0.79
APOL1-210ENST00000438034 DNAJC5Q9H3Z4 198 aa19.95■□□□□ 0.78
APOL1-210ENST00000438034 POLA1P09884 1462 aaPredicted RBP19.88■□□□□ 0.77
APOL1-210ENST00000438034 CUX1P39880 1505 aa19.86■□□□□ 0.77
APOL1-210ENST00000438034 SOGA1O94964 1423 aa19.85■□□□□ 0.77
APOL1-210ENST00000438034 FGD5Q6ZNL6 1462 aa19.84■□□□□ 0.77
APOL1-210ENST00000438034 ZNF608Q9ULD9 1512 aaPredicted RBP19.82■□□□□ 0.76
APOL1-210ENST00000438034 TARBP1Q13395 1621 aaKnown RBP19.8■□□□□ 0.76
APOL1-210ENST00000438034 WRNQ14191 1432 aaPredicted RBP eCLIP19.79■□□□□ 0.76
APOL1-210ENST00000438034 RAD54L2Q9Y4B4 1467 aa19.77■□□□□ 0.76
APOL1-210ENST00000438034 EIF4G3O43432 1585 aaKnown RBP19.76■□□□□ 0.75
APOL1-210ENST00000438034 WDR97A6NE52 1622 aa19.75■□□□□ 0.75
APOL1-210ENST00000438034 AQRO60306 1485 aaKnown RBP eCLIP19.73■□□□□ 0.753e-6■■■□□ 17
APOL1-210ENST00000438034 OSCARQ8IYS5 282 aa19.72■□□□□ 0.75
APOL1-210ENST00000438034 TDRD9Q8NDG6 1382 aaKnown RBP19.71■□□□□ 0.75
APOL1-210ENST00000438034 TOP2BQ02880 1626 aa19.7■□□□□ 0.74
APOL1-210ENST00000438034 BIVM-ERCC5R4GMW8 1640 aa19.69■□□□□ 0.74
APOL1-210ENST00000438034 ABCA10Q8WWZ4 1543 aa19.66■□□□□ 0.74
APOL1-210ENST00000438034 SYNJ1O43426 1573 aa19.65■□□□□ 0.74
APOL1-210ENST00000438034 GRIN2BQ13224 1484 aa19.63■□□□□ 0.73
APOL1-210ENST00000438034 GAPVD1Q14C86 1478 aa19.61■□□□□ 0.73
APOL1-210ENST00000438034 FBLN2P98095 1184 aa19.59■□□□□ 0.73
APOL1-210ENST00000438034 MAGI1Q96QZ7 1491 aaPredicted RBP19.59■□□□□ 0.73
APOL1-210ENST00000438034 SNAPC4Q5SXM2 1469 aa19.57■□□□□ 0.72
APOL1-210ENST00000438034 CHMP7Q8WUX9 453 aaPredicted RBP19.55■□□□□ 0.72
APOL1-210ENST00000438034 ABCA5Q8WWZ7 1642 aa19.54■□□□□ 0.72
APOL1-210ENST00000438034 SYNJ2O15056 1496 aa19.5■□□□□ 0.71
APOL1-210ENST00000438034 PBRM1Q86U86 1689 aa19.49■□□□□ 0.71
APOL1-210ENST00000438034 CHD1O14646 1710 aa19.48■□□□□ 0.71
APOL1-210ENST00000438034 ERICH3Q5RHP9 1530 aa19.45■□□□□ 0.7
APOL1-210ENST00000438034 KIF27Q86VH2 1401 aa19.42■□□□□ 0.7
APOL1-210ENST00000438034 FHAD1B1AJZ9 1412 aa19.41■□□□□ 0.7
APOL1-210ENST00000438034 ADAMTS12P58397 1594 aa19.37■□□□□ 0.69
APOL1-210ENST00000438034 GRIN2AQ12879 1464 aa19.35■□□□□ 0.69
APOL1-210ENST00000438034 TRIM41Q8WV44 630 aa19.34■□□□□ 0.69
APOL1-210ENST00000438034 ARHGEF11O15085 1522 aa19.31■□□□□ 0.68
APOL1-210ENST00000438034 CLASP1Q7Z460 1538 aa19.3■□□□□ 0.68
APOL1-210ENST00000438034 RIMBP3CA6NJZ7 1639 aa19.29■□□□□ 0.68
APOL1-210ENST00000438034 RIMBP3BA6NNM3 1639 aa19.29■□□□□ 0.68
APOL1-210ENST00000438034 RIMBP3Q9UFD9 1639 aa19.29■□□□□ 0.68
APOL1-210ENST00000438034 IGF1RP08069 1367 aa19.28■□□□□ 0.68
APOL1-210ENST00000438034 NUP160Q12769 1436 aa19.25■□□□□ 0.67
APOL1-210ENST00000438034 CUL7Q14999 1698 aa19.25■□□□□ 0.67
APOL1-210ENST00000438034 CARMIL1Q5VZK9 1371 aa19.2■□□□□ 0.66
APOL1-210ENST00000438034 CEP170Q5SW79 1584 aa19.19■□□□□ 0.66
APOL1-210ENST00000438034 CYB5RLQ6IPT4 315 aa19.18■□□□□ 0.66
APOL1-210ENST00000438034 ARAP1Q96P48 1450 aa19.14■□□□□ 0.65
APOL1-210ENST00000438034 JPH4Q96JJ6 628 aa19.11■□□□□ 0.65
APOL1-210ENST00000438034 KIAA0586Q9BVV6 1533 aa19.1■□□□□ 0.65
APOL1-210ENST00000438034 RUSC2Q8N2Y8 1516 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms