RNA–Protein interactions for RNA: ENST00000437437.6

NR1I3-210, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 973 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-210ENST00000437437 NISCHQ9Y2I1 1504 aa31.35■■■□□ 2.61
NR1I3-210ENST00000437437 CCDC180Q9P1Z9 1646 aa27.83■■■□□ 2.05
NR1I3-210ENST00000437437 ABCC9O60706 1549 aa26.68■■□□□ 1.86
NR1I3-210ENST00000437437 ZCCHC6Q5VYS8 1495 aaKnown RBP26.23■■□□□ 1.79
NR1I3-210ENST00000437437 MYO15BQ96JP2 1530 aa26.09■■□□□ 1.77
NR1I3-210ENST00000437437 DCAF1Q9Y4B6 1507 aa26.07■■□□□ 1.76
NR1I3-210ENST00000437437 NACADO15069 1562 aa26.03■■□□□ 1.76
NR1I3-210ENST00000437437 RB1CC1Q8TDY2 1594 aa25.94■■□□□ 1.74
NR1I3-210ENST00000437437 DCAF8L2P0C7V8 631 aa25.73■■□□□ 1.71
NR1I3-210ENST00000437437 UNC13AQ9UPW8 1703 aa25.4■■□□□ 1.66
NR1I3-210ENST00000437437 SCRIBQ14160 1630 aa25.25■■□□□ 1.63
NR1I3-210ENST00000437437 BICRAQ9NZM4 1560 aa25.17■■□□□ 1.62
NR1I3-210ENST00000437437 SHROOM4Q9ULL8 1493 aa25.05■■□□□ 1.6
NR1I3-210ENST00000437437 PABPN1Q86U42 306 aaKnown RBP eCLIP24.89■■□□□ 1.58
NR1I3-210ENST00000437437 EIF4G1Q04637 1599 aaKnown RBP24.45■■□□□ 1.5
NR1I3-210ENST00000437437 CECR2Q9BXF3 1484 aa24.32■■□□□ 1.48
NR1I3-210ENST00000437437 BAZ1AQ9NRL2 1556 aaPredicted RBP24.29■■□□□ 1.48
NR1I3-210ENST00000437437 SMARCA4P51532 1647 aa24.27■■□□□ 1.48
NR1I3-210ENST00000437437 CC2D2AQ9P2K1 1620 aa24.24■■□□□ 1.47
NR1I3-210ENST00000437437 DNAJC5BQ9UF47 199 aa24.15■■□□□ 1.46
NR1I3-210ENST00000437437 MROH2BQ7Z745 1585 aa24.13■■□□□ 1.45
NR1I3-210ENST00000437437 PEG3Q9GZU2 1588 aa24.12■■□□□ 1.45
NR1I3-210ENST00000437437 SMARCA2P51531 1590 aa24.05■■□□□ 1.44
NR1I3-210ENST00000437437 ATAD2BQ9ULI0 1458 aa24.02■■□□□ 1.44
NR1I3-210ENST00000437437 NCAPD3P42695 1498 aa24■■□□□ 1.43
NR1I3-210ENST00000437437 RSF1Q96T23 1441 aaPredicted RBP23.98■■□□□ 1.43
NR1I3-210ENST00000437437 HMGXB3Q12766 1538 aa23.95■■□□□ 1.43
NR1I3-210ENST00000437437 WIZO95785 1651 aa23.88■■□□□ 1.41
NR1I3-210ENST00000437437 BAZ1BQ9UIG0 1483 aaKnown RBP23.81■■□□□ 1.4
NR1I3-210ENST00000437437 TOP2AP11388 1531 aaKnown RBP23.71■■□□□ 1.39
NR1I3-210ENST00000437437 AEBP2Q6ZN18 517 aaPredicted RBP23.48■■□□□ 1.35
NR1I3-210ENST00000437437 SUPT5HO00267 1087 aaKnown RBP23.4■■□□□ 1.34
NR1I3-210ENST00000437437 CCDC88BA6NC98 1476 aa23.36■■□□□ 1.33
NR1I3-210ENST00000437437 LAMC3Q9Y6N6 1575 aa23.31■■□□□ 1.32
NR1I3-210ENST00000437437 CHIC1Q5VXU3 224 aa23.3■■□□□ 1.32
NR1I3-210ENST00000437437 CADPSQ9ULU8 1353 aa23.26■■□□□ 1.31
NR1I3-210ENST00000437437 CFTRP13569 1480 aa23.24■■□□□ 1.31
NR1I3-210ENST00000437437 NESP48681 1621 aa23.21■■□□□ 1.31
NR1I3-210ENST00000437437 PRDM2Q13029 1718 aa23.17■■□□□ 1.3
NR1I3-210ENST00000437437 PDS5BQ9NTI5 1447 aa23.08■■□□□ 1.28
NR1I3-210ENST00000437437 KIF21AQ7Z4S6 1674 aa23.02■■□□□ 1.28
NR1I3-210ENST00000437437 FANCD2Q9BXW9 1451 aa22.98■■□□□ 1.27
NR1I3-210ENST00000437437 ERCC6Q03468 1493 aa22.97■■□□□ 1.27
NR1I3-210ENST00000437437 CEP164Q9UPV0 1460 aa22.93■■□□□ 1.26
NR1I3-210ENST00000437437 THOC2Q8NI27 1593 aaKnown RBP22.91■■□□□ 1.26
NR1I3-210ENST00000437437 MRC2Q9UBG0 1479 aa22.85■■□□□ 1.25
NR1I3-210ENST00000437437 WDR62O43379 1518 aa22.82■■□□□ 1.24
NR1I3-210ENST00000437437 URB2Q14146 1524 aaKnown RBP22.75■■□□□ 1.23
NR1I3-210ENST00000437437 CUX2O14529 1486 aa22.73■■□□□ 1.23
NR1I3-210ENST00000437437 ABCC8Q09428 1581 aa22.73■■□□□ 1.23
NR1I3-210ENST00000437437 DNMBPQ6XZF7 1577 aa22.71■■□□□ 1.23
NR1I3-210ENST00000437437 TOPBP1Q92547 1522 aa22.68■■□□□ 1.22
NR1I3-210ENST00000437437 CUX1P39880 1505 aa22.63■■□□□ 1.21
NR1I3-210ENST00000437437 BIVM-ERCC5R4GMW8 1640 aa22.59■■□□□ 1.21
NR1I3-210ENST00000437437 WRNQ14191 1432 aaPredicted RBP eCLIP22.58■■□□□ 1.21
NR1I3-210ENST00000437437 TOP2BQ02880 1626 aa22.57■■□□□ 1.2
NR1I3-210ENST00000437437 SYNJ1O43426 1573 aa22.54■■□□□ 1.2
NR1I3-210ENST00000437437 POLA1P09884 1462 aaPredicted RBP22.51■■□□□ 1.19
NR1I3-210ENST00000437437 FGD5Q6ZNL6 1462 aa22.47■■□□□ 1.19
NR1I3-210ENST00000437437 IFT140Q96RY7 1462 aa22.46■■□□□ 1.19
NR1I3-210ENST00000437437 TARBP1Q13395 1621 aaKnown RBP22.45■■□□□ 1.18
NR1I3-210ENST00000437437 WDR97A6NE52 1622 aa22.39■■□□□ 1.18
NR1I3-210ENST00000437437 SOGA1O94964 1423 aa22.35■■□□□ 1.17
NR1I3-210ENST00000437437 ABCA10Q8WWZ4 1543 aa22.34■■□□□ 1.17
NR1I3-210ENST00000437437 RAD54L2Q9Y4B4 1467 aa22.34■■□□□ 1.17
NR1I3-210ENST00000437437 ZNF608Q9ULD9 1512 aaPredicted RBP22.27■■□□□ 1.16
NR1I3-210ENST00000437437 EIF4G3O43432 1585 aaKnown RBP22.27■■□□□ 1.16
NR1I3-210ENST00000437437 ABCA5Q8WWZ7 1642 aa22.24■■□□□ 1.15
NR1I3-210ENST00000437437 AQRO60306 1485 aaKnown RBP eCLIP22.15■■□□□ 1.14
NR1I3-210ENST00000437437 TDRD9Q8NDG6 1382 aaKnown RBP22.15■■□□□ 1.14
NR1I3-210ENST00000437437 TRIM41Q8WV44 630 aa22.14■■□□□ 1.13
NR1I3-210ENST00000437437 GAPVD1Q14C86 1478 aa22.14■■□□□ 1.13
NR1I3-210ENST00000437437 PBRM1Q86U86 1689 aa22.13■■□□□ 1.13
NR1I3-210ENST00000437437 GRIN2BQ13224 1484 aa22.11■■□□□ 1.13
NR1I3-210ENST00000437437 ERICH3Q5RHP9 1530 aa22.09■■□□□ 1.13
NR1I3-210ENST00000437437 KIF27Q86VH2 1401 aa22.08■■□□□ 1.13
NR1I3-210ENST00000437437 MAGI1Q96QZ7 1491 aaPredicted RBP22.06■■□□□ 1.12
NR1I3-210ENST00000437437 SNAPC4Q5SXM2 1469 aa22.01■■□□□ 1.11
NR1I3-210ENST00000437437 ADAMTS12P58397 1594 aa21.99■■□□□ 1.11
NR1I3-210ENST00000437437 CUL7Q14999 1698 aa21.95■■□□□ 1.1
NR1I3-210ENST00000437437 IGF1RP08069 1367 aa21.94■■□□□ 1.1
NR1I3-210ENST00000437437 EEA1Q15075 1411 aa21.94■■□□□ 1.1
NR1I3-210ENST00000437437 SYNJ2O15056 1496 aa21.94■■□□□ 1.1
NR1I3-210ENST00000437437 RUSC2Q8N2Y8 1516 aa21.93■■□□□ 1.1
NR1I3-210ENST00000437437 FHAD1B1AJZ9 1412 aa21.92■■□□□ 1.1
NR1I3-210ENST00000437437 CHD1O14646 1710 aa21.91■■□□□ 1.1
NR1I3-210ENST00000437437 GRIN2AQ12879 1464 aa21.83■■□□□ 1.09
NR1I3-210ENST00000437437 PRXQ9BXM0 1461 aa21.8■■□□□ 1.08
NR1I3-210ENST00000437437 CARMIL1Q5VZK9 1371 aa21.8■■□□□ 1.08
NR1I3-210ENST00000437437 NUP160Q12769 1436 aa21.76■■□□□ 1.07
NR1I3-210ENST00000437437 CHMP7Q8WUX9 453 aaPredicted RBP21.76■■□□□ 1.07
NR1I3-210ENST00000437437 RAPGEF2Q9Y4G8 1499 aa21.74■■□□□ 1.07
NR1I3-210ENST00000437437 CSRNP3Q8WYN3 585 aa21.73■■□□□ 1.07
NR1I3-210ENST00000437437 CLASP1Q7Z460 1538 aa21.72■■□□□ 1.07
NR1I3-210ENST00000437437 CEP170Q5SW79 1584 aa21.72■■□□□ 1.07
NR1I3-210ENST00000437437 KIF21BO75037 1637 aa21.71■■□□□ 1.07
NR1I3-210ENST00000437437 OSCARQ8IYS5 282 aa21.71■■□□□ 1.07
NR1I3-210ENST00000437437 FBLN2P98095 1184 aa21.68■■□□□ 1.06
NR1I3-210ENST00000437437 KIAA0586Q9BVV6 1533 aa21.6■■□□□ 1.05
NR1I3-210ENST00000437437 SHROOM2Q13796 1616 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms