RNA–Protein interactions for RNA: ENST00000437202.1

HTRA2-203, Transcript of HtrA serine peptidase 2, humanhuman

TSL 1 (best)

Gene HTRA2, Length 1,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTRA2-203ENST00000437202 NISCHQ9Y2I1 1504 aa55.57■■■■■ 6.49
HTRA2-203ENST00000437202 CCDC180Q9P1Z9 1646 aa49.25■■■■■ 5.48
HTRA2-203ENST00000437202 ABCC9O60706 1549 aa47.97■■■■■ 5.27
HTRA2-203ENST00000437202 DCAF8L2P0C7V8 631 aa46.35■■■■■ 5.01
HTRA2-203ENST00000437202 ZCCHC6Q5VYS8 1495 aaKnown RBP46.35■■■■■ 5.01
HTRA2-203ENST00000437202 NACADO15069 1562 aa46.22■■■■■ 4.99
HTRA2-203ENST00000437202 RB1CC1Q8TDY2 1594 aa46.21■■■■■ 4.99
HTRA2-203ENST00000437202 MYO15BQ96JP2 1530 aa46.01■■■■■ 4.96
HTRA2-203ENST00000437202 DCAF1Q9Y4B6 1507 aa45.94■■■■■ 4.95
HTRA2-203ENST00000437202 UNC13AQ9UPW8 1703 aa45.26■■■■■ 4.84
HTRA2-203ENST00000437202 SCRIBQ14160 1630 aa45.03■■■■■ 4.8
HTRA2-203ENST00000437202 PABPN1Q86U42 306 aaKnown RBP eCLIP44.88■■■■■ 4.78
HTRA2-203ENST00000437202 BICRAQ9NZM4 1560 aa44.85■■■■■ 4.77
HTRA2-203ENST00000437202 SHROOM4Q9ULL8 1493 aa44.29■■■■■ 4.68
HTRA2-203ENST00000437202 DNAJC5BQ9UF47 199 aa43.77■■■■■ 4.6
HTRA2-203ENST00000437202 EIF4G1Q04637 1599 aaKnown RBP43.63■■■■■ 4.57
HTRA2-203ENST00000437202 CC2D2AQ9P2K1 1620 aa43.39■■■■■ 4.54
HTRA2-203ENST00000437202 CECR2Q9BXF3 1484 aa43.29■■■■■ 4.52
HTRA2-203ENST00000437202 SMARCA4P51532 1647 aa43.07■■■■■ 4.48
HTRA2-203ENST00000437202 BAZ1AQ9NRL2 1556 aaPredicted RBP43.03■■■■■ 4.48
HTRA2-203ENST00000437202 MROH2BQ7Z745 1585 aa42.86■■■■■ 4.45
HTRA2-203ENST00000437202 ATAD2BQ9ULI0 1458 aa42.74■■■■■ 4.43
HTRA2-203ENST00000437202 SMARCA2P51531 1590 aa42.68■■■■■ 4.42
HTRA2-203ENST00000437202 NCAPD3P42695 1498 aa42.65■■■■■ 4.42
HTRA2-203ENST00000437202 PEG3Q9GZU2 1588 aa42.61■■■■■ 4.41
HTRA2-203ENST00000437202 HMGXB3Q12766 1538 aa42.47■■■■■ 4.39
HTRA2-203ENST00000437202 RSF1Q96T23 1441 aaPredicted RBP42.45■■■■■ 4.39
HTRA2-203ENST00000437202 WIZO95785 1651 aa42.44■■■■■ 4.38
HTRA2-203ENST00000437202 BAZ1BQ9UIG0 1483 aaKnown RBP42.4■■■■■ 4.38
HTRA2-203ENST00000437202 TOP2AP11388 1531 aaKnown RBP41.95■■■■■ 4.31
HTRA2-203ENST00000437202 SUPT5HO00267 1087 aaKnown RBP41.65■■■■■ 4.26
HTRA2-203ENST00000437202 NESP48681 1621 aa41.61■■■■■ 4.25
HTRA2-203ENST00000437202 LAMC3Q9Y6N6 1575 aa41.49■■■■■ 4.23
HTRA2-203ENST00000437202 CCDC88BA6NC98 1476 aa41.48■■■■■ 4.23
HTRA2-203ENST00000437202 CADPSQ9ULU8 1353 aa41.43■■■■■ 4.22
HTRA2-203ENST00000437202 ERCC6Q03468 1493 aa41.28■■■■■ 4.2
HTRA2-203ENST00000437202 CFTRP13569 1480 aa41.25■■■■■ 4.19
HTRA2-203ENST00000437202 PDS5BQ9NTI5 1447 aa41.18■■■■■ 4.18
HTRA2-203ENST00000437202 KIF21AQ7Z4S6 1674 aa41.14■■■■■ 4.18
HTRA2-203ENST00000437202 PRDM2Q13029 1718 aa41.01■■■■■ 4.15
HTRA2-203ENST00000437202 FANCD2Q9BXW9 1451 aa40.98■■■■■ 4.15
HTRA2-203ENST00000437202 THOC2Q8NI27 1593 aaKnown RBP40.89■■■■■ 4.14
HTRA2-203ENST00000437202 CEP164Q9UPV0 1460 aa40.89■■■■■ 4.14
HTRA2-203ENST00000437202 MRC2Q9UBG0 1479 aa40.76■■■■■ 4.12
HTRA2-203ENST00000437202 CUX2O14529 1486 aa40.7■■■■■ 4.11
HTRA2-203ENST00000437202 WDR62O43379 1518 aa40.62■■■■■ 4.09
HTRA2-203ENST00000437202 URB2Q14146 1524 aaKnown RBP40.57■■■■■ 4.08
HTRA2-203ENST00000437202 TOPBP1Q92547 1522 aa40.36■■■■■ 4.05
HTRA2-203ENST00000437202 DNMBPQ6XZF7 1577 aa40.33■■■■■ 4.05
HTRA2-203ENST00000437202 ABCC8Q09428 1581 aa40.31■■■■■ 4.04
HTRA2-203ENST00000437202 CUX1P39880 1505 aa40.18■■■■■ 4.02
HTRA2-203ENST00000437202 POLA1P09884 1462 aaPredicted RBP40.04■■■■■ 4
HTRA2-203ENST00000437202 WRNQ14191 1432 aaPredicted RBP eCLIP40.01■■■■■ 4
HTRA2-203ENST00000437202 IFT140Q96RY7 1462 aa40.01■■■■□ 3.99
HTRA2-203ENST00000437202 FGD5Q6ZNL6 1462 aa40■■■■□ 3.99
HTRA2-203ENST00000437202 SYNJ1O43426 1573 aa39.94■■■■□ 3.98
HTRA2-203ENST00000437202 TARBP1Q13395 1621 aaKnown RBP39.91■■■■□ 3.98
HTRA2-203ENST00000437202 BIVM-ERCC5R4GMW8 1640 aa39.91■■■■□ 3.98
HTRA2-203ENST00000437202 TOP2BQ02880 1626 aa39.9■■■■□ 3.98
HTRA2-203ENST00000437202 RAD54L2Q9Y4B4 1467 aa39.89■■■■□ 3.98
HTRA2-203ENST00000437202 SOGA1O94964 1423 aa39.87■■■■□ 3.97
HTRA2-203ENST00000437202 ZNF608Q9ULD9 1512 aaPredicted RBP39.85■■■■□ 3.97
HTRA2-203ENST00000437202 EIF4G3O43432 1585 aaKnown RBP39.7■■■■□ 3.95
HTRA2-203ENST00000437202 WDR97A6NE52 1622 aa39.66■■■■□ 3.94
HTRA2-203ENST00000437202 AQRO60306 1485 aaKnown RBP eCLIP39.66■■■■□ 3.942e-9■■■■□ 21.4
HTRA2-203ENST00000437202 TDRD9Q8NDG6 1382 aaKnown RBP39.64■■■■□ 3.94
HTRA2-203ENST00000437202 ABCA10Q8WWZ4 1543 aa39.6■■■■□ 3.93
HTRA2-203ENST00000437202 ABCA5Q8WWZ7 1642 aa39.44■■■■□ 3.9
HTRA2-203ENST00000437202 GAPVD1Q14C86 1478 aa39.41■■■■□ 3.9
HTRA2-203ENST00000437202 GRIN2BQ13224 1484 aa39.36■■■■□ 3.89
HTRA2-203ENST00000437202 PBRM1Q86U86 1689 aa39.35■■■■□ 3.89
HTRA2-203ENST00000437202 SNAPC4Q5SXM2 1469 aa39.3■■■■□ 3.88
HTRA2-203ENST00000437202 TRIM41Q8WV44 630 aa39.28■■■■□ 3.88
HTRA2-203ENST00000437202 MAGI1Q96QZ7 1491 aaPredicted RBP39.21■■■■□ 3.87
HTRA2-203ENST00000437202 CHD1O14646 1710 aa39.17■■■■□ 3.86
HTRA2-203ENST00000437202 KIF27Q86VH2 1401 aa39.13■■■■□ 3.86
HTRA2-203ENST00000437202 FBLN2P98095 1184 aa39.12■■■■□ 3.85
HTRA2-203ENST00000437202 DNAJC5Q9H3Z4 198 aa39.12■■■■□ 3.85
HTRA2-203ENST00000437202 ERICH3Q5RHP9 1530 aa39.12■■■■□ 3.85
HTRA2-203ENST00000437202 OSCARQ8IYS5 282 aa39.08■■■■□ 3.85
HTRA2-203ENST00000437202 SYNJ2O15056 1496 aa39.06■■■■□ 3.84
HTRA2-203ENST00000437202 ADAMTS12P58397 1594 aa39.04■■■■□ 3.84
HTRA2-203ENST00000437202 CHMP7Q8WUX9 453 aaPredicted RBP39.04■■■■□ 3.84
HTRA2-203ENST00000437202 CHIC1Q5VXU3 224 aa39.02■■■■□ 3.84
HTRA2-203ENST00000437202 FHAD1B1AJZ9 1412 aa38.96■■■■□ 3.83
HTRA2-203ENST00000437202 IGF1RP08069 1367 aa38.95■■■■□ 3.83
HTRA2-203ENST00000437202 RUSC2Q8N2Y8 1516 aa38.95■■■■□ 3.83
HTRA2-203ENST00000437202 GRIN2AQ12879 1464 aa38.87■■■■□ 3.81
HTRA2-203ENST00000437202 CUL7Q14999 1698 aa38.83■■■■□ 3.81
HTRA2-203ENST00000437202 CARMIL1Q5VZK9 1371 aa38.73■■■■□ 3.79
HTRA2-203ENST00000437202 CLASP1Q7Z460 1538 aa38.71■■■■□ 3.79
HTRA2-203ENST00000437202 CEP170Q5SW79 1584 aa38.7■■■■□ 3.79
HTRA2-203ENST00000437202 NUP160Q12769 1436 aa38.66■■■■□ 3.78
HTRA2-203ENST00000437202 EEA1Q15075 1411 aa38.55■■■■□ 3.76
HTRA2-203ENST00000437202 RAPGEF2Q9Y4G8 1499 aa38.53■■■■□ 3.76
HTRA2-203ENST00000437202 FAM9AQ8IZU1 332 aaPredicted RBP38.52■■■■□ 3.76
HTRA2-203ENST00000437202 CSRNP3Q8WYN3 585 aa38.51■■■■□ 3.76
HTRA2-203ENST00000437202 RIMBP3CA6NJZ7 1639 aa38.48■■■■□ 3.75
HTRA2-203ENST00000437202 RIMBP3BA6NNM3 1639 aa38.48■■■■□ 3.75
HTRA2-203ENST00000437202 RIMBP3Q9UFD9 1639 aa38.48■■■■□ 3.75
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms