RNA–Protein interactions for RNA: ENST00000437150.6

GCA-204, Transcript of grancalcin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCA, Length 1,992 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCA-204ENST00000437150 NISCHQ9Y2I1 1504 aa26.38■■□□□ 1.81
GCA-204ENST00000437150 CCDC180Q9P1Z9 1646 aa23.04■■□□□ 1.28
GCA-204ENST00000437150 ZCCHC6Q5VYS8 1495 aaKnown RBP22.1■■□□□ 1.13
GCA-204ENST00000437150 ABCC9O60706 1549 aa22.02■■□□□ 1.11
GCA-204ENST00000437150 DCAF8L2P0C7V8 631 aa21.81■■□□□ 1.08
GCA-204ENST00000437150 DCAF1Q9Y4B6 1507 aa21.8■■□□□ 1.08
GCA-204ENST00000437150 MYO15BQ96JP2 1530 aa21.62■■□□□ 1.05
GCA-204ENST00000437150 NACADO15069 1562 aa21.53■■□□□ 1.04
GCA-204ENST00000437150 RB1CC1Q8TDY2 1594 aa21.37■■□□□ 1.01
GCA-204ENST00000437150 SHROOM4Q9ULL8 1493 aa21.33■■□□□ 1
GCA-204ENST00000437150 SCRIBQ14160 1630 aa21.16■□□□□ 0.98
GCA-204ENST00000437150 UNC13AQ9UPW8 1703 aa21.01■□□□□ 0.95
GCA-204ENST00000437150 BICRAQ9NZM4 1560 aa20.84■□□□□ 0.93
GCA-204ENST00000437150 PABPN1Q86U42 306 aaKnown RBP eCLIP20.76■□□□□ 0.91
GCA-204ENST00000437150 CECR2Q9BXF3 1484 aa20.56■□□□□ 0.88
GCA-204ENST00000437150 SUPT5HO00267 1087 aaKnown RBP20.41■□□□□ 0.86
GCA-204ENST00000437150 RSF1Q96T23 1441 aaPredicted RBP20.4■□□□□ 0.86
GCA-204ENST00000437150 MROH2BQ7Z745 1585 aa20.39■□□□□ 0.85
GCA-204ENST00000437150 BAZ1AQ9NRL2 1556 aaPredicted RBP20.33■□□□□ 0.85
GCA-204ENST00000437150 SMARCA4P51532 1647 aa20.3■□□□□ 0.84
GCA-204ENST00000437150 WIZO95785 1651 aa20.2■□□□□ 0.82
GCA-204ENST00000437150 EIF4G1Q04637 1599 aaKnown RBP20.17■□□□□ 0.82
GCA-204ENST00000437150 PEG3Q9GZU2 1588 aa20.08■□□□□ 0.81
GCA-204ENST00000437150 ATAD2BQ9ULI0 1458 aa20.04■□□□□ 0.8
GCA-204ENST00000437150 SMARCA2P51531 1590 aa19.96■□□□□ 0.79
GCA-204ENST00000437150 TOP2AP11388 1531 aaKnown RBP19.93■□□□□ 0.78
GCA-204ENST00000437150 CC2D2AQ9P2K1 1620 aa19.93■□□□□ 0.78
GCA-204ENST00000437150 NCAPD3P42695 1498 aa19.92■□□□□ 0.78
GCA-204ENST00000437150 BAZ1BQ9UIG0 1483 aaKnown RBP19.85■□□□□ 0.77
GCA-204ENST00000437150 HMGXB3Q12766 1538 aa19.82■□□□□ 0.76
GCA-204ENST00000437150 CCDC88BA6NC98 1476 aa19.78■□□□□ 0.76
GCA-204ENST00000437150 DNAJC5BQ9UF47 199 aa19.75■□□□□ 0.75
GCA-204ENST00000437150 CHIC1Q5VXU3 224 aa19.49■□□□□ 0.71
GCA-204ENST00000437150 CFTRP13569 1480 aa19.41■□□□□ 0.7
GCA-204ENST00000437150 CADPSQ9ULU8 1353 aa19.38■□□□□ 0.69
GCA-204ENST00000437150 NESP48681 1621 aa19.3■□□□□ 0.68
GCA-204ENST00000437150 ABCC8Q09428 1581 aa19.28■□□□□ 0.68
GCA-204ENST00000437150 PRDM2Q13029 1718 aa19.23■□□□□ 0.67
GCA-204ENST00000437150 LAMC3Q9Y6N6 1575 aa19.22■□□□□ 0.67
GCA-204ENST00000437150 TRIM41Q8WV44 630 aa19.19■□□□□ 0.66
GCA-204ENST00000437150 WRNQ14191 1432 aaPredicted RBP eCLIP19.15■□□□□ 0.66
GCA-204ENST00000437150 FANCD2Q9BXW9 1451 aa19.14■□□□□ 0.65
GCA-204ENST00000437150 SYNJ1O43426 1573 aa19.11■□□□□ 0.65
GCA-204ENST00000437150 PDS5BQ9NTI5 1447 aa19.07■□□□□ 0.64
GCA-204ENST00000437150 CUX1P39880 1505 aa19.06■□□□□ 0.64
GCA-204ENST00000437150 TOP2BQ02880 1626 aa19.04■□□□□ 0.64
GCA-204ENST00000437150 KIF21AQ7Z4S6 1674 aa19.03■□□□□ 0.64
GCA-204ENST00000437150 BIVM-ERCC5R4GMW8 1640 aa19.01■□□□□ 0.63
GCA-204ENST00000437150 CEP164Q9UPV0 1460 aa19■□□□□ 0.63
GCA-204ENST00000437150 URB2Q14146 1524 aaKnown RBP18.95■□□□□ 0.62
GCA-204ENST00000437150 TOPBP1Q92547 1522 aa18.92■□□□□ 0.62
GCA-204ENST00000437150 DNMBPQ6XZF7 1577 aa18.91■□□□□ 0.62
GCA-204ENST00000437150 SOGA1O94964 1423 aa18.9■□□□□ 0.62
GCA-204ENST00000437150 RUSC2Q8N2Y8 1516 aa18.88■□□□□ 0.61
GCA-204ENST00000437150 FGD5Q6ZNL6 1462 aa18.86■□□□□ 0.61
GCA-204ENST00000437150 FAM9AQ8IZU1 332 aaPredicted RBP18.84■□□□□ 0.61
GCA-204ENST00000437150 MRC2Q9UBG0 1479 aa18.84■□□□□ 0.61
GCA-204ENST00000437150 POLA1P09884 1462 aaPredicted RBP18.82■□□□□ 0.6
GCA-204ENST00000437150 ERCC6Q03468 1493 aa18.82■□□□□ 0.6
GCA-204ENST00000437150 WDR62O43379 1518 aa18.78■□□□□ 0.6
GCA-204ENST00000437150 THOC2Q8NI27 1593 aaKnown RBP18.78■□□□□ 0.6
GCA-204ENST00000437150 RAD54L2Q9Y4B4 1467 aa18.77■□□□□ 0.6
GCA-204ENST00000437150 LOC105371045A0A1W2PR82 267 aa18.75■□□□□ 0.59
GCA-204ENST00000437150 CUX2O14529 1486 aa18.72■□□□□ 0.59
GCA-204ENST00000437150 EEA1Q15075 1411 aa18.72■□□□□ 0.59
GCA-204ENST00000437150 CSRNP3Q8WYN3 585 aa18.71■□□□□ 0.59
GCA-204ENST00000437150 ABCA10Q8WWZ4 1543 aa18.7■□□□□ 0.58
GCA-204ENST00000437150 TARBP1Q13395 1621 aaKnown RBP18.68■□□□□ 0.58
GCA-204ENST00000437150 KIF27Q86VH2 1401 aa18.66■□□□□ 0.58
GCA-204ENST00000437150 WDR97A6NE52 1622 aa18.66■□□□□ 0.58
GCA-204ENST00000437150 IGF1RP08069 1367 aa18.61■□□□□ 0.57
GCA-204ENST00000437150 TDRD9Q8NDG6 1382 aaKnown RBP18.6■□□□□ 0.57
GCA-204ENST00000437150 EHMT2Q96KQ7 1210 aa18.58■□□□□ 0.56
GCA-204ENST00000437150 IFT140Q96RY7 1462 aa18.58■□□□□ 0.56
GCA-204ENST00000437150 ABCA5Q8WWZ7 1642 aa18.56■□□□□ 0.56
GCA-204ENST00000437150 ZNF608Q9ULD9 1512 aaPredicted RBP18.55■□□□□ 0.56
GCA-204ENST00000437150 PRXQ9BXM0 1461 aa18.55■□□□□ 0.56
GCA-204ENST00000437150 AQRO60306 1485 aaKnown RBP eCLIP18.53■□□□□ 0.56
GCA-204ENST00000437150 GAPVD1Q14C86 1478 aa18.53■□□□□ 0.56
GCA-204ENST00000437150 KIF21BO75037 1637 aa18.52■□□□□ 0.56
GCA-204ENST00000437150 RAPGEF2Q9Y4G8 1499 aa18.5■□□□□ 0.55
GCA-204ENST00000437150 CARMIL1Q5VZK9 1371 aa18.46■□□□□ 0.55
GCA-204ENST00000437150 GOLGA3Q08378 1498 aa18.45■□□□□ 0.54
GCA-204ENST00000437150 ERICH3Q5RHP9 1530 aa18.45■□□□□ 0.54
GCA-204ENST00000437150 EIF4G3O43432 1585 aaKnown RBP18.42■□□□□ 0.54
GCA-204ENST00000437150 PBRM1Q86U86 1689 aa18.41■□□□□ 0.54
GCA-204ENST00000437150 TNIKQ9UKE5 1360 aa18.41■□□□□ 0.54
GCA-204ENST00000437150 GRIN2BQ13224 1484 aa18.39■□□□□ 0.53
GCA-204ENST00000437150 UBTFP17480 764 aaKnown RBP18.39■□□□□ 0.53
GCA-204ENST00000437150 CUL7Q14999 1698 aa18.38■□□□□ 0.53
GCA-204ENST00000437150 ADAMTS12P58397 1594 aa18.31■□□□□ 0.52
GCA-204ENST00000437150 FHAD1B1AJZ9 1412 aa18.31■□□□□ 0.52
GCA-204ENST00000437150 SNAPC4Q5SXM2 1469 aa18.3■□□□□ 0.52
GCA-204ENST00000437150 CEP162Q5TB80 1403 aa18.26■□□□□ 0.51
GCA-204ENST00000437150 MAGI1Q96QZ7 1491 aaPredicted RBP18.26■□□□□ 0.51
GCA-204ENST00000437150 SYNJ2O15056 1496 aa18.2■□□□□ 0.5
GCA-204ENST00000437150 GRIN2AQ12879 1464 aa18.19■□□□□ 0.5
GCA-204ENST00000437150 RANGAP1P46060 587 aaPredicted RBP18.17■□□□□ 0.5
GCA-204ENST00000437150 CLIP1P30622 1438 aa18.17■□□□□ 0.5
GCA-204ENST00000437150 CHMP7Q8WUX9 453 aaPredicted RBP18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms