RNA–Protein interactions for RNA: ENST00000436963.1

LINC00441-202, humanhuman

TSL 3

Gene LINC00441, Length 220 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00441-202ENST00000436963 NISCHQ9Y2I1 1504 aa29.66■■■□□ 2.34
LINC00441-202ENST00000436963 ABCC9O60706 1549 aa29.1■■■□□ 2.25
LINC00441-202ENST00000436963 DNAJC5BQ9UF47 199 aa28.87■■■□□ 2.21
LINC00441-202ENST00000436963 DNAJC5Q9H3Z4 198 aa27.72■■■□□ 2.03
LINC00441-202ENST00000436963 CCDC180Q9P1Z9 1646 aa27.45■■□□□ 1.99
LINC00441-202ENST00000436963 RB1CC1Q8TDY2 1594 aa26.92■■□□□ 1.9
LINC00441-202ENST00000436963 PABPN1Q86U42 306 aaKnown RBP eCLIP26.78■■□□□ 1.88
LINC00441-202ENST00000436963 UNC13AQ9UPW8 1703 aa26.53■■□□□ 1.84
LINC00441-202ENST00000436963 CECR2Q9BXF3 1484 aa26.37■■□□□ 1.81
LINC00441-202ENST00000436963 NACADO15069 1562 aa26.29■■□□□ 1.8
LINC00441-202ENST00000436963 BICRAQ9NZM4 1560 aa26.28■■□□□ 1.8
LINC00441-202ENST00000436963 CC2D2AQ9P2K1 1620 aa26.25■■□□□ 1.79
LINC00441-202ENST00000436963 TRIM41Q8WV44 630 aa25.8■■□□□ 1.72
LINC00441-202ENST00000436963 CUX2O14529 1486 aa25.76■■□□□ 1.71
LINC00441-202ENST00000436963 DCAF8L2P0C7V8 631 aa25.74■■□□□ 1.71
LINC00441-202ENST00000436963 EIF4G1Q04637 1599 aaKnown RBP25.73■■□□□ 1.71
LINC00441-202ENST00000436963 SHROOM4Q9ULL8 1493 aa25.6■■□□□ 1.69
LINC00441-202ENST00000436963 MYO15BQ96JP2 1530 aa25.31■■□□□ 1.64
LINC00441-202ENST00000436963 ERCC6Q03468 1493 aa25.21■■□□□ 1.63
LINC00441-202ENST00000436963 SCRIBQ14160 1630 aa24.9■■□□□ 1.58
LINC00441-202ENST00000436963 AEBP2Q6ZN18 517 aaPredicted RBP24.69■■□□□ 1.54
LINC00441-202ENST00000436963 THOC2Q8NI27 1593 aaKnown RBP24.67■■□□□ 1.54
LINC00441-202ENST00000436963 NESP48681 1621 aa24.54■■□□□ 1.52
LINC00441-202ENST00000436963 BAZ1AQ9NRL2 1556 aaPredicted RBP24.37■■□□□ 1.49
LINC00441-202ENST00000436963 DCAF1Q9Y4B6 1507 aa24.35■■□□□ 1.49
LINC00441-202ENST00000436963 SMARCA2P51531 1590 aa24.33■■□□□ 1.48
LINC00441-202ENST00000436963 RIMBP3CA6NJZ7 1639 aa24.28■■□□□ 1.48
LINC00441-202ENST00000436963 RIMBP3BA6NNM3 1639 aa24.28■■□□□ 1.48
LINC00441-202ENST00000436963 RIMBP3Q9UFD9 1639 aa24.28■■□□□ 1.48
LINC00441-202ENST00000436963 NCAPD3P42695 1498 aa24.26■■□□□ 1.47
LINC00441-202ENST00000436963 KIF21AQ7Z4S6 1674 aa24.26■■□□□ 1.47
LINC00441-202ENST00000436963 OSCARQ8IYS5 282 aa24.24■■□□□ 1.47
LINC00441-202ENST00000436963 ZCCHC6Q5VYS8 1495 aaKnown RBP24.2■■□□□ 1.47
LINC00441-202ENST00000436963 TRHP20396 242 aaPredicted RBP24.12■■□□□ 1.45
LINC00441-202ENST00000436963 LAMC3Q9Y6N6 1575 aa24.05■■□□□ 1.44
LINC00441-202ENST00000436963 ILDR1Q86SU0 546 aaPredicted RBP24.05■■□□□ 1.44
LINC00441-202ENST00000436963 HMGXB3Q12766 1538 aa23.96■■□□□ 1.43
LINC00441-202ENST00000436963 ATAD2BQ9ULI0 1458 aa23.96■■□□□ 1.43
LINC00441-202ENST00000436963 ARHGEF11O15085 1522 aa23.95■■□□□ 1.43
LINC00441-202ENST00000436963 PDS5BQ9NTI5 1447 aa23.89■■□□□ 1.41
LINC00441-202ENST00000436963 WDR62O43379 1518 aa23.87■■□□□ 1.41
LINC00441-202ENST00000436963 MRC2Q9UBG0 1479 aa23.84■■□□□ 1.41
LINC00441-202ENST00000436963 CYB5RLQ6IPT4 315 aa23.83■■□□□ 1.41
LINC00441-202ENST00000436963 BAZ1BQ9UIG0 1483 aaKnown RBP23.64■■□□□ 1.38
LINC00441-202ENST00000436963 ARAP1Q96P48 1450 aa23.6■■□□□ 1.37
LINC00441-202ENST00000436963 SMARCA4P51532 1647 aa23.57■■□□□ 1.36
LINC00441-202ENST00000436963 CADPSQ9ULU8 1353 aa23.42■■□□□ 1.34
LINC00441-202ENST00000436963 CEP164Q9UPV0 1460 aa23.39■■□□□ 1.34
LINC00441-202ENST00000436963 PEG3Q9GZU2 1588 aa23.31■■□□□ 1.32
LINC00441-202ENST00000436963 CHD1O14646 1710 aa23.23■■□□□ 1.31
LINC00441-202ENST00000436963 FANCD2Q9BXW9 1451 aa23.21■■□□□ 1.31
LINC00441-202ENST00000436963 RSF1Q96T23 1441 aaPredicted RBP23.2■■□□□ 1.3
LINC00441-202ENST00000436963 ZNF608Q9ULD9 1512 aaPredicted RBP23.18■■□□□ 1.3
LINC00441-202ENST00000436963 URB2Q14146 1524 aaKnown RBP23.17■■□□□ 1.3
LINC00441-202ENST00000436963 EIF4G3O43432 1585 aaKnown RBP23■■□□□ 1.27
LINC00441-202ENST00000436963 KDM4FA0A1W2PPD8 638 aa22.97■■□□□ 1.27
LINC00441-202ENST00000436963 IFT140Q96RY7 1462 aa22.97■■□□□ 1.27
LINC00441-202ENST00000436963 FBLN2P98095 1184 aa22.87■■□□□ 1.25
LINC00441-202ENST00000436963 MROH2BQ7Z745 1585 aa22.87■■□□□ 1.25
LINC00441-202ENST00000436963 CFTRP13569 1480 aa22.82■■□□□ 1.24
LINC00441-202ENST00000436963 CLASP1Q7Z460 1538 aa22.82■■□□□ 1.24
LINC00441-202ENST00000436963 ERCC6L2Q5T890 1561 aa22.8■■□□□ 1.24
LINC00441-202ENST00000436963 KIF13AQ9H1H9 1805 aa22.8■■□□□ 1.24
LINC00441-202ENST00000436963 FBXO41Q8TF61 875 aa22.75■■□□□ 1.23
LINC00441-202ENST00000436963 LMTK3Q96Q04 1460 aa22.73■■□□□ 1.23
LINC00441-202ENST00000436963 AQRO60306 1485 aaKnown RBP eCLIP22.72■■□□□ 1.23
LINC00441-202ENST00000436963 HECW2Q9P2P5 1572 aa22.69■■□□□ 1.22
LINC00441-202ENST00000436963 GAPVD1Q14C86 1478 aa22.67■■□□□ 1.22
LINC00441-202ENST00000436963 PRDM2Q13029 1718 aa22.64■■□□□ 1.21
LINC00441-202ENST00000436963 SYNJ1O43426 1573 aa22.61■■□□□ 1.21
LINC00441-202ENST00000436963 TOPBP1Q92547 1522 aa22.59■■□□□ 1.21
LINC00441-202ENST00000436963 SOCS7O14512 581 aa22.59■■□□□ 1.21
LINC00441-202ENST00000436963 TARBP1Q13395 1621 aaKnown RBP22.59■■□□□ 1.21
LINC00441-202ENST00000436963 WIZO95785 1651 aa22.58■■□□□ 1.2
LINC00441-202ENST00000436963 ILDR2Q71H61 639 aa22.48■■□□□ 1.19
LINC00441-202ENST00000436963 KDM6BO15054 1643 aa22.47■■□□□ 1.19
LINC00441-202ENST00000436963 SNAPC4Q5SXM2 1469 aa22.43■■□□□ 1.18
LINC00441-202ENST00000436963 ADGRL1O94910 1474 aa22.39■■□□□ 1.17
LINC00441-202ENST00000436963 CHMP7Q8WUX9 453 aaPredicted RBP22.38■■□□□ 1.17
LINC00441-202ENST00000436963 DNMBPQ6XZF7 1577 aa22.36■■□□□ 1.17
LINC00441-202ENST00000436963 SYNJ2O15056 1496 aa22.35■■□□□ 1.17
LINC00441-202ENST00000436963 ABCC8Q09428 1581 aa22.35■■□□□ 1.17
LINC00441-202ENST00000436963 TDRD9Q8NDG6 1382 aaKnown RBP22.27■■□□□ 1.16
LINC00441-202ENST00000436963 FAM69CQ0P6D2 419 aa22.27■■□□□ 1.16
LINC00441-202ENST00000436963 MAGI1Q96QZ7 1491 aaPredicted RBP22.27■■□□□ 1.16
LINC00441-202ENST00000436963 TSPOAP1O95153 1857 aa22.26■■□□□ 1.15
LINC00441-202ENST00000436963 POLA1P09884 1462 aaPredicted RBP22.25■■□□□ 1.15
LINC00441-202ENST00000436963 ABCC10Q5T3U5 1492 aa22.25■■□□□ 1.15
LINC00441-202ENST00000436963 DISP3Q9P2K9 1392 aa22.23■■□□□ 1.15
LINC00441-202ENST00000436963 DIP2BQ9P265 1576 aa22.21■■□□□ 1.15
LINC00441-202ENST00000436963 RAD54L2Q9Y4B4 1467 aa22.21■■□□□ 1.15
LINC00441-202ENST00000436963 WDR97A6NE52 1622 aa22.16■■□□□ 1.14
LINC00441-202ENST00000436963 CEP170Q5SW79 1584 aa22.12■■□□□ 1.13
LINC00441-202ENST00000436963 TOP2AP11388 1531 aaKnown RBP22.08■■□□□ 1.13
LINC00441-202ENST00000436963 GRIN2BQ13224 1484 aa22.08■■□□□ 1.12
LINC00441-202ENST00000436963 SOGA1O94964 1423 aa22.06■■□□□ 1.12
LINC00441-202ENST00000436963 MAPKBP1O60336 1514 aa22.05■■□□□ 1.12
LINC00441-202ENST00000436963 PBRM1Q86U86 1689 aa22.04■■□□□ 1.12
LINC00441-202ENST00000436963 SHROOM2Q13796 1616 aa21.99■■□□□ 1.11
LINC00441-202ENST00000436963 SPATA31D1Q6ZQQ2 1576 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms