RNA–Protein interactions for RNA: ENST00000436842.5

RNASEH1-202, Transcript of ribonuclease H1, humanhuman

TSL 2

Gene RNASEH1, Length 2,120 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNASEH1-202ENST00000436842 NISCHQ9Y2I1 1504 aa46.54■■■■■ 5.04
RNASEH1-202ENST00000436842 CCDC180Q9P1Z9 1646 aa40.05■■■■■ 4
RNASEH1-202ENST00000436842 ZCCHC6Q5VYS8 1495 aaKnown RBP39.29■■■■□ 3.88
RNASEH1-202ENST00000436842 SHROOM4Q9ULL8 1493 aa38.82■■■■□ 3.81
RNASEH1-202ENST00000436842 DCAF1Q9Y4B6 1507 aa38.38■■■■□ 3.73
RNASEH1-202ENST00000436842 DCAF8L2P0C7V8 631 aa38.31■■■■□ 3.72
RNASEH1-202ENST00000436842 SUPT5HO00267 1087 aaKnown RBP37.76■■■■□ 3.63
RNASEH1-202ENST00000436842 MYO15BQ96JP2 1530 aa37.55■■■■□ 3.6
RNASEH1-202ENST00000436842 ABCC9O60706 1549 aa37.29■■■■□ 3.56
RNASEH1-202ENST00000436842 SCRIBQ14160 1630 aa37.15■■■■□ 3.54
RNASEH1-202ENST00000436842 NACADO15069 1562 aa37.11■■■■□ 3.53
RNASEH1-202ENST00000436842 RB1CC1Q8TDY2 1594 aa36.6■■■■□ 3.45
RNASEH1-202ENST00000436842 CHIC1Q5VXU3 224 aa36.56■■■■□ 3.44
RNASEH1-202ENST00000436842 RSF1Q96T23 1441 aaPredicted RBP36.51■■■■□ 3.43
RNASEH1-202ENST00000436842 CECR2Q9BXF3 1484 aa36.21■■■■□ 3.39
RNASEH1-202ENST00000436842 MROH2BQ7Z745 1585 aa36.07■■■■□ 3.36
RNASEH1-202ENST00000436842 UNC13AQ9UPW8 1703 aa36.01■■■■□ 3.36
RNASEH1-202ENST00000436842 WIZO95785 1651 aa35.84■■■■□ 3.33
RNASEH1-202ENST00000436842 BAZ1AQ9NRL2 1556 aaPredicted RBP35.83■■■■□ 3.33
RNASEH1-202ENST00000436842 SMARCA4P51532 1647 aa35.6■■■■□ 3.29
RNASEH1-202ENST00000436842 BICRAQ9NZM4 1560 aa35.59■■■■□ 3.29
RNASEH1-202ENST00000436842 PABPN1Q86U42 306 aaKnown RBP eCLIP35.4■■■■□ 3.26
RNASEH1-202ENST00000436842 TOP2AP11388 1531 aaKnown RBP35.39■■■■□ 3.26
RNASEH1-202ENST00000436842 TRIM41Q8WV44 630 aa35.35■■■■□ 3.25
RNASEH1-202ENST00000436842 LOC105371045A0A1W2PR82 267 aa35.29■■■■□ 3.24
RNASEH1-202ENST00000436842 EIF4G1Q04637 1599 aaKnown RBP35.23■■■■□ 3.23
RNASEH1-202ENST00000436842 SMARCA2P51531 1590 aa35.13■■■■□ 3.21
RNASEH1-202ENST00000436842 CCDC88BA6NC98 1476 aa35.11■■■■□ 3.21
RNASEH1-202ENST00000436842 PEG3Q9GZU2 1588 aa35.06■■■■□ 3.2
RNASEH1-202ENST00000436842 FAM9AQ8IZU1 332 aaPredicted RBP34.85■■■■□ 3.17
RNASEH1-202ENST00000436842 ATAD2BQ9ULI0 1458 aa34.8■■■■□ 3.16
RNASEH1-202ENST00000436842 PCGF6Q9BYE7 350 aa34.75■■■■□ 3.15
RNASEH1-202ENST00000436842 ABCC8Q09428 1581 aa34.74■■■■□ 3.15
RNASEH1-202ENST00000436842 HRCP23327 699 aa34.69■■■■□ 3.14
RNASEH1-202ENST00000436842 BAZ1BQ9UIG0 1483 aaKnown RBP34.65■■■■□ 3.14
RNASEH1-202ENST00000436842 EHMT2Q96KQ7 1210 aa34.42■■■■□ 3.1
RNASEH1-202ENST00000436842 WRNQ14191 1432 aaPredicted RBP eCLIP34.31■■■■□ 3.08
RNASEH1-202ENST00000436842 HMGXB3Q12766 1538 aa34.3■■■■□ 3.08
RNASEH1-202ENST00000436842 TRIM26Q12899 539 aaPredicted RBP34.3■■■■□ 3.08
RNASEH1-202ENST00000436842 NCAPD3P42695 1498 aa34.29■■■■□ 3.08
RNASEH1-202ENST00000436842 SOGA1O94964 1423 aa34.27■■■■□ 3.08
RNASEH1-202ENST00000436842 EEA1Q15075 1411 aa34.19■■■■□ 3.06
RNASEH1-202ENST00000436842 SYNJ1O43426 1573 aa34.18■■■■□ 3.06
RNASEH1-202ENST00000436842 RUSC2Q8N2Y8 1516 aa34.11■■■■□ 3.05
RNASEH1-202ENST00000436842 CSRNP3Q8WYN3 585 aa34.02■■■■□ 3.04
RNASEH1-202ENST00000436842 TNIKQ9UKE5 1360 aa33.91■■■■□ 3.02
RNASEH1-202ENST00000436842 TOP2BQ02880 1626 aa33.9■■■■□ 3.02
RNASEH1-202ENST00000436842 PPARGC1BQ86YN6 1023 aaKnown RBP33.88■■■■□ 3.01
RNASEH1-202ENST00000436842 CEP162Q5TB80 1403 aa33.86■■■■□ 3.01
RNASEH1-202ENST00000436842 GOLGA3Q08378 1498 aa33.84■■■■□ 3.01
RNASEH1-202ENST00000436842 BIVM-ERCC5R4GMW8 1640 aa33.83■■■■□ 3.01
RNASEH1-202ENST00000436842 CFTRP13569 1480 aa33.82■■■■□ 3
RNASEH1-202ENST00000436842 KIF21BO75037 1637 aa33.76■■■■□ 3
RNASEH1-202ENST00000436842 CEP164Q9UPV0 1460 aa33.74■■■□□ 2.99
RNASEH1-202ENST00000436842 UBTFP17480 764 aaKnown RBP33.72■■■□□ 2.99
RNASEH1-202ENST00000436842 CC2D2AQ9P2K1 1620 aa33.71■■■□□ 2.99
RNASEH1-202ENST00000436842 CUX1P39880 1505 aa33.66■■■□□ 2.98
RNASEH1-202ENST00000436842 PRDM2Q13029 1718 aa33.64■■■□□ 2.98
RNASEH1-202ENST00000436842 CADPSQ9ULU8 1353 aa33.51■■■□□ 2.95
RNASEH1-202ENST00000436842 RAPGEF2Q9Y4G8 1499 aa33.5■■■□□ 2.95
RNASEH1-202ENST00000436842 ZEB1P37275 1124 aaPredicted RBP33.42■■■□□ 2.94
RNASEH1-202ENST00000436842 CLIP1P30622 1438 aa33.36■■■□□ 2.93
RNASEH1-202ENST00000436842 PRXQ9BXM0 1461 aa33.36■■■□□ 2.93
RNASEH1-202ENST00000436842 ERICH3Q5RHP9 1530 aa33.35■■■□□ 2.93
RNASEH1-202ENST00000436842 KIF27Q86VH2 1401 aa33.33■■■□□ 2.93
RNASEH1-202ENST00000436842 VPS8Q8N3P4 1428 aa33.19■■■□□ 2.9
RNASEH1-202ENST00000436842 TTBK1Q5TCY1 1321 aaPredicted RBP33.18■■■□□ 2.9
RNASEH1-202ENST00000436842 FANCD2Q9BXW9 1451 aa33.17■■■□□ 2.9
RNASEH1-202ENST00000436842 FGD5Q6ZNL6 1462 aa33.13■■■□□ 2.89
RNASEH1-202ENST00000436842 CUX2O14529 1486 aa33.09■■■□□ 2.89
RNASEH1-202ENST00000436842 NESP48681 1621 aa33.05■■■□□ 2.88
RNASEH1-202ENST00000436842 RANGAP1P46060 587 aaPredicted RBP33.03■■■□□ 2.88
RNASEH1-202ENST00000436842 DNMBPQ6XZF7 1577 aa33■■■□□ 2.87
RNASEH1-202ENST00000436842 IGF1RP08069 1367 aa32.99■■■□□ 2.87
RNASEH1-202ENST00000436842 LAMC3Q9Y6N6 1575 aa32.96■■■□□ 2.87
RNASEH1-202ENST00000436842 ARAP1Q96P48 1450 aa32.95■■■□□ 2.87
RNASEH1-202ENST00000436842 DNAJC5BQ9UF47 199 aa32.95■■■□□ 2.86
RNASEH1-202ENST00000436842 TOPBP1Q92547 1522 aa32.91■■■□□ 2.86
RNASEH1-202ENST00000436842 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.9■■■□□ 2.86
RNASEH1-202ENST00000436842 APLP2Q06481 763 aa32.85■■■□□ 2.85
RNASEH1-202ENST00000436842 POLA1P09884 1462 aaPredicted RBP32.85■■■□□ 2.85
RNASEH1-202ENST00000436842 CARMIL1Q5VZK9 1371 aa32.83■■■□□ 2.85
RNASEH1-202ENST00000436842 ABCA10Q8WWZ4 1543 aa32.81■■■□□ 2.84
RNASEH1-202ENST00000436842 CCER1Q8TC90 406 aaPredicted RBP32.81■■■□□ 2.84
RNASEH1-202ENST00000436842 RAD54L2Q9Y4B4 1467 aa32.8■■■□□ 2.84
RNASEH1-202ENST00000436842 ARHGAP35Q9NRY4 1499 aa32.78■■■□□ 2.84
RNASEH1-202ENST00000436842 URB2Q14146 1524 aaKnown RBP32.74■■■□□ 2.83
RNASEH1-202ENST00000436842 PDS5BQ9NTI5 1447 aa32.69■■■□□ 2.82
RNASEH1-202ENST00000436842 WDR97A6NE52 1622 aa32.63■■■□□ 2.81
RNASEH1-202ENST00000436842 KIF21AQ7Z4S6 1674 aa32.59■■■□□ 2.81
RNASEH1-202ENST00000436842 CUL7Q14999 1698 aa32.57■■■□□ 2.8
RNASEH1-202ENST00000436842 KANK4Q5T7N3 995 aaPredicted RBP32.53■■■□□ 2.8
RNASEH1-202ENST00000436842 HNRNPUL2Q1KMD3 747 aaKnown RBP32.52■■■□□ 2.8
RNASEH1-202ENST00000436842 ABCA5Q8WWZ7 1642 aa32.49■■■□□ 2.79
RNASEH1-202ENST00000436842 TDRD9Q8NDG6 1382 aaKnown RBP32.4■■■□□ 2.78
RNASEH1-202ENST00000436842 CTTNBP2Q8WZ74 1663 aa32.38■■■□□ 2.77
RNASEH1-202ENST00000436842 GAPVD1Q14C86 1478 aa32.38■■■□□ 2.77
RNASEH1-202ENST00000436842 MAP3K1Q13233 1512 aa32.37■■■□□ 2.77
RNASEH1-202ENST00000436842 TARBP1Q13395 1621 aaKnown RBP32.35■■■□□ 2.77
RNASEH1-202ENST00000436842 RRBP1Q9P2E9 1410 aaKnown RBP32.34■■■□□ 2.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms