RNA–Protein interactions for RNA: ENST00000436481.1

RHBDD1-206, Transcript of rhomboid domain containing 1, humanhuman

TSL 3

Gene RHBDD1, Length 777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD1-206ENST00000436481 NISCHQ9Y2I1 1504 aa30.58■■■□□ 2.49
RHBDD1-206ENST00000436481 CCDC180Q9P1Z9 1646 aa26.97■■□□□ 1.91
RHBDD1-206ENST00000436481 ABCC9O60706 1549 aa26.01■■□□□ 1.75
RHBDD1-206ENST00000436481 ZCCHC6Q5VYS8 1495 aaKnown RBP25.56■■□□□ 1.68
RHBDD1-206ENST00000436481 DCAF8L2P0C7V8 631 aa25.44■■□□□ 1.66
RHBDD1-206ENST00000436481 DCAF1Q9Y4B6 1507 aa25.31■■□□□ 1.64
RHBDD1-206ENST00000436481 NACADO15069 1562 aa25.27■■□□□ 1.64
RHBDD1-206ENST00000436481 MYO15BQ96JP2 1530 aa25.24■■□□□ 1.63
RHBDD1-206ENST00000436481 RB1CC1Q8TDY2 1594 aa25.19■■□□□ 1.62
RHBDD1-206ENST00000436481 AEBP2Q6ZN18 517 aaPredicted RBP24.83■■□□□ 1.57
RHBDD1-206ENST00000436481 SCRIBQ14160 1630 aa24.68■■□□□ 1.54
RHBDD1-206ENST00000436481 UNC13AQ9UPW8 1703 aa24.63■■□□□ 1.53
RHBDD1-206ENST00000436481 SHROOM4Q9ULL8 1493 aa24.48■■□□□ 1.51
RHBDD1-206ENST00000436481 PABPN1Q86U42 306 aaKnown RBP eCLIP24.41■■□□□ 1.5
RHBDD1-206ENST00000436481 BICRAQ9NZM4 1560 aa24.41■■□□□ 1.5
RHBDD1-206ENST00000436481 CHIC1Q5VXU3 224 aa23.9■■□□□ 1.42
RHBDD1-206ENST00000436481 CECR2Q9BXF3 1484 aa23.79■■□□□ 1.4
RHBDD1-206ENST00000436481 EIF4G1Q04637 1599 aaKnown RBP23.74■■□□□ 1.39
RHBDD1-206ENST00000436481 BAZ1AQ9NRL2 1556 aaPredicted RBP23.67■■□□□ 1.38
RHBDD1-206ENST00000436481 SMARCA4P51532 1647 aa23.63■■□□□ 1.37
RHBDD1-206ENST00000436481 MROH2BQ7Z745 1585 aa23.58■■□□□ 1.37
RHBDD1-206ENST00000436481 CC2D2AQ9P2K1 1620 aa23.53■■□□□ 1.36
RHBDD1-206ENST00000436481 DNAJC5BQ9UF47 199 aa23.48■■□□□ 1.35
RHBDD1-206ENST00000436481 RSF1Q96T23 1441 aaPredicted RBP23.48■■□□□ 1.35
RHBDD1-206ENST00000436481 ATAD2BQ9ULI0 1458 aa23.4■■□□□ 1.34
RHBDD1-206ENST00000436481 SMARCA2P51531 1590 aa23.39■■□□□ 1.33
RHBDD1-206ENST00000436481 PEG3Q9GZU2 1588 aa23.38■■□□□ 1.33
RHBDD1-206ENST00000436481 WIZO95785 1651 aa23.35■■□□□ 1.33
RHBDD1-206ENST00000436481 NCAPD3P42695 1498 aa23.31■■□□□ 1.32
RHBDD1-206ENST00000436481 SUPT5HO00267 1087 aaKnown RBP23.26■■□□□ 1.31
RHBDD1-206ENST00000436481 BAZ1BQ9UIG0 1483 aaKnown RBP23.24■■□□□ 1.31
RHBDD1-206ENST00000436481 HMGXB3Q12766 1538 aa23.23■■□□□ 1.31
RHBDD1-206ENST00000436481 TOP2AP11388 1531 aaKnown RBP23.13■■□□□ 1.29
RHBDD1-206ENST00000436481 CCDC88BA6NC98 1476 aa22.86■■□□□ 1.25
RHBDD1-206ENST00000436481 CADPSQ9ULU8 1353 aa22.67■■□□□ 1.22
RHBDD1-206ENST00000436481 NESP48681 1621 aa22.64■■□□□ 1.21
RHBDD1-206ENST00000436481 LAMC3Q9Y6N6 1575 aa22.63■■□□□ 1.21
RHBDD1-206ENST00000436481 CFTRP13569 1480 aa22.62■■□□□ 1.21
RHBDD1-206ENST00000436481 PDS5BQ9NTI5 1447 aa22.48■■□□□ 1.19
RHBDD1-206ENST00000436481 PRDM2Q13029 1718 aa22.47■■□□□ 1.19
RHBDD1-206ENST00000436481 FANCD2Q9BXW9 1451 aa22.41■■□□□ 1.18
RHBDD1-206ENST00000436481 ERCC6Q03468 1493 aa22.39■■□□□ 1.17
RHBDD1-206ENST00000436481 KIF21AQ7Z4S6 1674 aa22.37■■□□□ 1.17
RHBDD1-206ENST00000436481 CEP164Q9UPV0 1460 aa22.34■■□□□ 1.17
RHBDD1-206ENST00000436481 MRC2Q9UBG0 1479 aa22.22■■□□□ 1.15
RHBDD1-206ENST00000436481 ABCC8Q09428 1581 aa22.16■■□□□ 1.14
RHBDD1-206ENST00000436481 THOC2Q8NI27 1593 aaKnown RBP22.16■■□□□ 1.14
RHBDD1-206ENST00000436481 URB2Q14146 1524 aaKnown RBP22.16■■□□□ 1.14
RHBDD1-206ENST00000436481 WRNQ14191 1432 aaPredicted RBP eCLIP22.13■■□□□ 1.13
RHBDD1-206ENST00000436481 WDR62O43379 1518 aa22.11■■□□□ 1.13
RHBDD1-206ENST00000436481 DNMBPQ6XZF7 1577 aa22.1■■□□□ 1.13
RHBDD1-206ENST00000436481 CUX1P39880 1505 aa22.1■■□□□ 1.13
RHBDD1-206ENST00000436481 TOPBP1Q92547 1522 aa22.1■■□□□ 1.13
RHBDD1-206ENST00000436481 SYNJ1O43426 1573 aa22.04■■□□□ 1.12
RHBDD1-206ENST00000436481 TOP2BQ02880 1626 aa22.02■■□□□ 1.12
RHBDD1-206ENST00000436481 BIVM-ERCC5R4GMW8 1640 aa22■■□□□ 1.11
RHBDD1-206ENST00000436481 CUX2O14529 1486 aa21.96■■□□□ 1.11
RHBDD1-206ENST00000436481 FGD5Q6ZNL6 1462 aa21.96■■□□□ 1.11
RHBDD1-206ENST00000436481 TRIM41Q8WV44 630 aa21.94■■□□□ 1.1
RHBDD1-206ENST00000436481 POLA1P09884 1462 aaPredicted RBP21.94■■□□□ 1.1
RHBDD1-206ENST00000436481 SOGA1O94964 1423 aa21.88■■□□□ 1.09
RHBDD1-206ENST00000436481 IFT140Q96RY7 1462 aa21.85■■□□□ 1.09
RHBDD1-206ENST00000436481 RAD54L2Q9Y4B4 1467 aa21.85■■□□□ 1.09
RHBDD1-206ENST00000436481 TARBP1Q13395 1621 aaKnown RBP21.81■■□□□ 1.08
RHBDD1-206ENST00000436481 ABCA10Q8WWZ4 1543 aa21.75■■□□□ 1.07
RHBDD1-206ENST00000436481 WDR97A6NE52 1622 aa21.73■■□□□ 1.07
RHBDD1-206ENST00000436481 ZNF608Q9ULD9 1512 aaPredicted RBP21.72■■□□□ 1.07
RHBDD1-206ENST00000436481 TDRD9Q8NDG6 1382 aaKnown RBP21.7■■□□□ 1.06
RHBDD1-206ENST00000436481 AQRO60306 1485 aaKnown RBP eCLIP21.67■■□□□ 1.06
RHBDD1-206ENST00000436481 EIF4G3O43432 1585 aaKnown RBP21.64■■□□□ 1.05
RHBDD1-206ENST00000436481 KIF27Q86VH2 1401 aa21.63■■□□□ 1.05
RHBDD1-206ENST00000436481 GAPVD1Q14C86 1478 aa21.63■■□□□ 1.05
RHBDD1-206ENST00000436481 ABCA5Q8WWZ7 1642 aa21.62■■□□□ 1.05
RHBDD1-206ENST00000436481 RUSC2Q8N2Y8 1516 aa21.58■■□□□ 1.04
RHBDD1-206ENST00000436481 GRIN2BQ13224 1484 aa21.56■■□□□ 1.04
RHBDD1-206ENST00000436481 PBRM1Q86U86 1689 aa21.53■■□□□ 1.04
RHBDD1-206ENST00000436481 EEA1Q15075 1411 aa21.51■■□□□ 1.03
RHBDD1-206ENST00000436481 ERICH3Q5RHP9 1530 aa21.5■■□□□ 1.03
RHBDD1-206ENST00000436481 IGF1RP08069 1367 aa21.49■■□□□ 1.03
RHBDD1-206ENST00000436481 FAM9AQ8IZU1 332 aaPredicted RBP21.49■■□□□ 1.03
RHBDD1-206ENST00000436481 SNAPC4Q5SXM2 1469 aa21.46■■□□□ 1.03
RHBDD1-206ENST00000436481 MAGI1Q96QZ7 1491 aaPredicted RBP21.45■■□□□ 1.02
RHBDD1-206ENST00000436481 CSRNP3Q8WYN3 585 aa21.44■■□□□ 1.02
RHBDD1-206ENST00000436481 SENP3Q9H4L4 574 aaPredicted RBP21.41■■□□□ 1.02
RHBDD1-206ENST00000436481 CUL7Q14999 1698 aa21.4■■□□□ 1.02
RHBDD1-206ENST00000436481 ADAMTS12P58397 1594 aa21.39■■□□□ 1.01
RHBDD1-206ENST00000436481 FHAD1B1AJZ9 1412 aa21.38■■□□□ 1.01
RHBDD1-206ENST00000436481 CARMIL1Q5VZK9 1371 aa21.38■■□□□ 1.01
RHBDD1-206ENST00000436481 SYNJ2O15056 1496 aa21.36■■□□□ 1.01
RHBDD1-206ENST00000436481 FBLN2P98095 1184 aa21.35■■□□□ 1.01
RHBDD1-206ENST00000436481 CHMP7Q8WUX9 453 aaPredicted RBP21.35■■□□□ 1.01
RHBDD1-206ENST00000436481 PRXQ9BXM0 1461 aa21.32■■□□□ 1
RHBDD1-206ENST00000436481 RAPGEF2Q9Y4G8 1499 aa21.3■■□□□ 1
RHBDD1-206ENST00000436481 CHD1O14646 1710 aa21.29■■□□□ 1
RHBDD1-206ENST00000436481 GRIN2AQ12879 1464 aa21.27■■□□□ 1
RHBDD1-206ENST00000436481 KIF21BO75037 1637 aa21.24■□□□□ 0.99
RHBDD1-206ENST00000436481 EHMT2Q96KQ7 1210 aa21.2■□□□□ 0.98
RHBDD1-206ENST00000436481 OSCARQ8IYS5 282 aa21.18■□□□□ 0.98
RHBDD1-206ENST00000436481 GOLGA3Q08378 1498 aa21.17■□□□□ 0.98
RHBDD1-206ENST00000436481 NUP160Q12769 1436 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms