RNA–Protein interactions for RNA: ENST00000435953.2

AC004448.3-201, humanhuman

TSL 2 BASIC

Gene AC004448.3, Length 543 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004448.3-201ENST00000435953 NISCHQ9Y2I1 1504 aa22.96■■□□□ 1.27
AC004448.3-201ENST00000435953 CCDC180Q9P1Z9 1646 aa20.03■□□□□ 0.8
AC004448.3-201ENST00000435953 ABCC9O60706 1549 aa19.37■□□□□ 0.69
AC004448.3-201ENST00000435953 DCAF8L2P0C7V8 631 aa19.2■□□□□ 0.66
AC004448.3-201ENST00000435953 ZCCHC6Q5VYS8 1495 aaKnown RBP19.17■□□□□ 0.66
AC004448.3-201ENST00000435953 DCAF1Q9Y4B6 1507 aa18.98■□□□□ 0.63
AC004448.3-201ENST00000435953 MYO15BQ96JP2 1530 aa18.9■□□□□ 0.62
AC004448.3-201ENST00000435953 NACADO15069 1562 aa18.85■□□□□ 0.61
AC004448.3-201ENST00000435953 RB1CC1Q8TDY2 1594 aa18.74■□□□□ 0.59
AC004448.3-201ENST00000435953 SHROOM4Q9ULL8 1493 aa18.51■□□□□ 0.55
AC004448.3-201ENST00000435953 SCRIBQ14160 1630 aa18.4■□□□□ 0.54
AC004448.3-201ENST00000435953 PABPN1Q86U42 306 aaKnown RBP eCLIP18.31■□□□□ 0.52
AC004448.3-201ENST00000435953 BICRAQ9NZM4 1560 aa18.17■□□□□ 0.5
AC004448.3-201ENST00000435953 UNC13AQ9UPW8 1703 aa18.15■□□□□ 0.5
AC004448.3-201ENST00000435953 CECR2Q9BXF3 1484 aa17.88■□□□□ 0.45
AC004448.3-201ENST00000435953 RSF1Q96T23 1441 aaPredicted RBP17.72■□□□□ 0.43
AC004448.3-201ENST00000435953 BAZ1AQ9NRL2 1556 aaPredicted RBP17.72■□□□□ 0.43
AC004448.3-201ENST00000435953 SUPT5HO00267 1087 aaKnown RBP17.71■□□□□ 0.43
AC004448.3-201ENST00000435953 MROH2BQ7Z745 1585 aa17.7■□□□□ 0.42
AC004448.3-201ENST00000435953 EIF4G1Q04637 1599 aaKnown RBP17.66■□□□□ 0.42
AC004448.3-201ENST00000435953 SMARCA4P51532 1647 aa17.64■□□□□ 0.41
AC004448.3-201ENST00000435953 ATAD2BQ9ULI0 1458 aa17.54■□□□□ 0.4
AC004448.3-201ENST00000435953 DNAJC5BQ9UF47 199 aa17.52■□□□□ 0.4
AC004448.3-201ENST00000435953 NCAPD3P42695 1498 aa17.48■□□□□ 0.39
AC004448.3-201ENST00000435953 SMARCA2P51531 1590 aa17.47■□□□□ 0.39
AC004448.3-201ENST00000435953 WIZO95785 1651 aa17.46■□□□□ 0.39
AC004448.3-201ENST00000435953 PEG3Q9GZU2 1588 aa17.46■□□□□ 0.39
AC004448.3-201ENST00000435953 CC2D2AQ9P2K1 1620 aa17.46■□□□□ 0.39
AC004448.3-201ENST00000435953 BAZ1BQ9UIG0 1483 aaKnown RBP17.38■□□□□ 0.37
AC004448.3-201ENST00000435953 TOP2AP11388 1531 aaKnown RBP17.31■□□□□ 0.36
AC004448.3-201ENST00000435953 HMGXB3Q12766 1538 aa17.31■□□□□ 0.36
AC004448.3-201ENST00000435953 CCDC88BA6NC98 1476 aa17.21■□□□□ 0.35
AC004448.3-201ENST00000435953 CADPSQ9ULU8 1353 aa17.02■□□□□ 0.32
AC004448.3-201ENST00000435953 CFTRP13569 1480 aa16.97■□□□□ 0.31
AC004448.3-201ENST00000435953 NESP48681 1621 aa16.88■□□□□ 0.29
AC004448.3-201ENST00000435953 LAMC3Q9Y6N6 1575 aa16.84■□□□□ 0.29
AC004448.3-201ENST00000435953 PDS5BQ9NTI5 1447 aa16.82■□□□□ 0.28
AC004448.3-201ENST00000435953 CHIC1Q5VXU3 224 aa16.81■□□□□ 0.28
AC004448.3-201ENST00000435953 FANCD2Q9BXW9 1451 aa16.77■□□□□ 0.28
AC004448.3-201ENST00000435953 TRIM41Q8WV44 630 aa16.71■□□□□ 0.27
AC004448.3-201ENST00000435953 CEP164Q9UPV0 1460 aa16.67■□□□□ 0.26
AC004448.3-201ENST00000435953 WRNQ14191 1432 aaPredicted RBP eCLIP16.67■□□□□ 0.26
AC004448.3-201ENST00000435953 ERCC6Q03468 1493 aa16.65■□□□□ 0.26
AC004448.3-201ENST00000435953 ABCC8Q09428 1581 aa16.64■□□□□ 0.25
AC004448.3-201ENST00000435953 PRDM2Q13029 1718 aa16.58■□□□□ 0.24
AC004448.3-201ENST00000435953 CUX1P39880 1505 aa16.57■□□□□ 0.24
AC004448.3-201ENST00000435953 MRC2Q9UBG0 1479 aa16.56■□□□□ 0.24
AC004448.3-201ENST00000435953 URB2Q14146 1524 aaKnown RBP16.55■□□□□ 0.24
AC004448.3-201ENST00000435953 KIF21AQ7Z4S6 1674 aa16.53■□□□□ 0.24
AC004448.3-201ENST00000435953 TOPBP1Q92547 1522 aa16.53■□□□□ 0.24
AC004448.3-201ENST00000435953 SYNJ1O43426 1573 aa16.51■□□□□ 0.23
AC004448.3-201ENST00000435953 DNMBPQ6XZF7 1577 aa16.5■□□□□ 0.23
AC004448.3-201ENST00000435953 TOP2BQ02880 1626 aa16.49■□□□□ 0.23
AC004448.3-201ENST00000435953 SOGA1O94964 1423 aa16.45■□□□□ 0.22
AC004448.3-201ENST00000435953 FGD5Q6ZNL6 1462 aa16.44■□□□□ 0.22
AC004448.3-201ENST00000435953 BIVM-ERCC5R4GMW8 1640 aa16.44■□□□□ 0.22
AC004448.3-201ENST00000435953 WDR62O43379 1518 aa16.44■□□□□ 0.22
AC004448.3-201ENST00000435953 POLA1P09884 1462 aaPredicted RBP16.42■□□□□ 0.22
AC004448.3-201ENST00000435953 THOC2Q8NI27 1593 aaKnown RBP16.4■□□□□ 0.22
AC004448.3-201ENST00000435953 RAD54L2Q9Y4B4 1467 aa16.39■□□□□ 0.21
AC004448.3-201ENST00000435953 CUX2O14529 1486 aa16.37■□□□□ 0.21
AC004448.3-201ENST00000435953 FAM9AQ8IZU1 332 aaPredicted RBP16.36■□□□□ 0.21
AC004448.3-201ENST00000435953 IFT140Q96RY7 1462 aa16.33■□□□□ 0.2
AC004448.3-201ENST00000435953 ABCA10Q8WWZ4 1543 aa16.31■□□□□ 0.2
AC004448.3-201ENST00000435953 KIF27Q86VH2 1401 aa16.31■□□□□ 0.2
AC004448.3-201ENST00000435953 TDRD9Q8NDG6 1382 aaKnown RBP16.31■□□□□ 0.2
AC004448.3-201ENST00000435953 CSRNP3Q8WYN3 585 aa16.31■□□□□ 0.2
AC004448.3-201ENST00000435953 RUSC2Q8N2Y8 1516 aa16.3■□□□□ 0.2
AC004448.3-201ENST00000435953 EEA1Q15075 1411 aa16.28■□□□□ 0.2
AC004448.3-201ENST00000435953 TARBP1Q13395 1621 aaKnown RBP16.26■□□□□ 0.19
AC004448.3-201ENST00000435953 IGF1RP08069 1367 aa16.26■□□□□ 0.19
AC004448.3-201ENST00000435953 AQRO60306 1485 aaKnown RBP eCLIP16.24■□□□□ 0.19
AC004448.3-201ENST00000435953 ZNF608Q9ULD9 1512 aaPredicted RBP16.23■□□□□ 0.19
AC004448.3-201ENST00000435953 GAPVD1Q14C86 1478 aa16.22■□□□□ 0.19
AC004448.3-201ENST00000435953 LOC105371045A0A1W2PR82 267 aa16.16■□□□□ 0.18
AC004448.3-201ENST00000435953 CARMIL1Q5VZK9 1371 aa16.14■□□□□ 0.17
AC004448.3-201ENST00000435953 GRIN2BQ13224 1484 aa16.14■□□□□ 0.17
AC004448.3-201ENST00000435953 WDR97A6NE52 1622 aa16.12■□□□□ 0.17
AC004448.3-201ENST00000435953 EHMT2Q96KQ7 1210 aa16.12■□□□□ 0.17
AC004448.3-201ENST00000435953 ABCA5Q8WWZ7 1642 aa16.11■□□□□ 0.17
AC004448.3-201ENST00000435953 PRXQ9BXM0 1461 aa16.1■□□□□ 0.17
AC004448.3-201ENST00000435953 ERICH3Q5RHP9 1530 aa16.09■□□□□ 0.17
AC004448.3-201ENST00000435953 EIF4G3O43432 1585 aaKnown RBP16.05■□□□□ 0.16
AC004448.3-201ENST00000435953 FHAD1B1AJZ9 1412 aa16.05■□□□□ 0.16
AC004448.3-201ENST00000435953 UBTFP17480 764 aaKnown RBP16.05■□□□□ 0.16
AC004448.3-201ENST00000435953 CHMP7Q8WUX9 453 aaPredicted RBP16.05■□□□□ 0.16
AC004448.3-201ENST00000435953 RAPGEF2Q9Y4G8 1499 aa16.03■□□□□ 0.16
AC004448.3-201ENST00000435953 FBLN2P98095 1184 aa16.03■□□□□ 0.16
AC004448.3-201ENST00000435953 SNAPC4Q5SXM2 1469 aa16.03■□□□□ 0.16
AC004448.3-201ENST00000435953 MAGI1Q96QZ7 1491 aaPredicted RBP16.02■□□□□ 0.15
AC004448.3-201ENST00000435953 GOLGA3Q08378 1498 aa15.99■□□□□ 0.15
AC004448.3-201ENST00000435953 KIF21BO75037 1637 aa15.97■□□□□ 0.15
AC004448.3-201ENST00000435953 SYNJ2O15056 1496 aa15.97■□□□□ 0.15
AC004448.3-201ENST00000435953 CUL7Q14999 1698 aa15.95■□□□□ 0.14
AC004448.3-201ENST00000435953 TNIKQ9UKE5 1360 aa15.95■□□□□ 0.14
AC004448.3-201ENST00000435953 PBRM1Q86U86 1689 aa15.95■□□□□ 0.14
AC004448.3-201ENST00000435953 ADAMTS12P58397 1594 aa15.93■□□□□ 0.14
AC004448.3-201ENST00000435953 GRIN2AQ12879 1464 aa15.91■□□□□ 0.14
AC004448.3-201ENST00000435953 RANGAP1P46060 587 aaPredicted RBP15.86■□□□□ 0.13
AC004448.3-201ENST00000435953 OSCARQ8IYS5 282 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms