RNA–Protein interactions for RNA: ENST00000435075.1

LINC00486-203, long intergenic non-protein coding RNA 486, humanhuman

TSL 1 (best)

Gene LINC00486, Length 1,360 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00486-203ENST00000435075 NISCHQ9Y2I1 1504 aa26.12■■□□□ 1.77
LINC00486-203ENST00000435075 CCDC180Q9P1Z9 1646 aa22.84■■□□□ 1.25
LINC00486-203ENST00000435075 ZCCHC6Q5VYS8 1495 aaKnown RBP21.95■■□□□ 1.1
LINC00486-203ENST00000435075 DCAF1Q9Y4B6 1507 aa21.72■■□□□ 1.07
LINC00486-203ENST00000435075 MYO15BQ96JP2 1530 aa21.47■■□□□ 1.03
LINC00486-203ENST00000435075 DCAF8L2P0C7V8 631 aa21.46■■□□□ 1.03
LINC00486-203ENST00000435075 ABCC9O60706 1549 aa21.35■■□□□ 1.01
LINC00486-203ENST00000435075 NACADO15069 1562 aa21.27■□□□□ 0.99
LINC00486-203ENST00000435075 SHROOM4Q9ULL8 1493 aa21.16■□□□□ 0.98
LINC00486-203ENST00000435075 RB1CC1Q8TDY2 1594 aa21.05■□□□□ 0.96
LINC00486-203ENST00000435075 SCRIBQ14160 1630 aa20.84■□□□□ 0.93
LINC00486-203ENST00000435075 SUPT5HO00267 1087 aaKnown RBP20.47■□□□□ 0.87
LINC00486-203ENST00000435075 UNC13AQ9UPW8 1703 aa20.46■□□□□ 0.87
LINC00486-203ENST00000435075 BICRAQ9NZM4 1560 aa20.27■□□□□ 0.84
LINC00486-203ENST00000435075 RSF1Q96T23 1441 aaPredicted RBP20.25■□□□□ 0.83
LINC00486-203ENST00000435075 BAZ1AQ9NRL2 1556 aaPredicted RBP20.22■□□□□ 0.83
LINC00486-203ENST00000435075 CECR2Q9BXF3 1484 aa20.16■□□□□ 0.82
LINC00486-203ENST00000435075 CHIC1Q5VXU3 224 aa20.13■□□□□ 0.81
LINC00486-203ENST00000435075 PABPN1Q86U42 306 aaKnown RBP eCLIP20.1■□□□□ 0.81
LINC00486-203ENST00000435075 MROH2BQ7Z745 1585 aa20.09■□□□□ 0.81
LINC00486-203ENST00000435075 AEBP2Q6ZN18 517 aaPredicted RBP20.06■□□□□ 0.8
LINC00486-203ENST00000435075 SMARCA4P51532 1647 aa20.05■□□□□ 0.8
LINC00486-203ENST00000435075 WIZO95785 1651 aa19.92■□□□□ 0.78
LINC00486-203ENST00000435075 PEG3Q9GZU2 1588 aa19.87■□□□□ 0.77
LINC00486-203ENST00000435075 TOP2AP11388 1531 aaKnown RBP19.83■□□□□ 0.77
LINC00486-203ENST00000435075 SMARCA2P51531 1590 aa19.8■□□□□ 0.76
LINC00486-203ENST00000435075 ATAD2BQ9ULI0 1458 aa19.7■□□□□ 0.74
LINC00486-203ENST00000435075 EIF4G1Q04637 1599 aaKnown RBP19.7■□□□□ 0.74
LINC00486-203ENST00000435075 BAZ1BQ9UIG0 1483 aaKnown RBP19.64■□□□□ 0.73
LINC00486-203ENST00000435075 NCAPD3P42695 1498 aa19.59■□□□□ 0.73
LINC00486-203ENST00000435075 HMGXB3Q12766 1538 aa19.58■□□□□ 0.73
LINC00486-203ENST00000435075 CCDC88BA6NC98 1476 aa19.57■□□□□ 0.72
LINC00486-203ENST00000435075 CC2D2AQ9P2K1 1620 aa19.37■□□□□ 0.69
LINC00486-203ENST00000435075 TRIM41Q8WV44 630 aa19.36■□□□□ 0.69
LINC00486-203ENST00000435075 CFTRP13569 1480 aa19.15■□□□□ 0.66
LINC00486-203ENST00000435075 WRNQ14191 1432 aaPredicted RBP eCLIP19.11■□□□□ 0.65
LINC00486-203ENST00000435075 ABCC8Q09428 1581 aa19.1■□□□□ 0.65
LINC00486-203ENST00000435075 PRDM2Q13029 1718 aa19.07■□□□□ 0.64
LINC00486-203ENST00000435075 CADPSQ9ULU8 1353 aa19.07■□□□□ 0.64
LINC00486-203ENST00000435075 EEA1Q15075 1411 aa19■□□□□ 0.63
LINC00486-203ENST00000435075 TOP2BQ02880 1626 aa18.95■□□□□ 0.62
LINC00486-203ENST00000435075 LAMC3Q9Y6N6 1575 aa18.93■□□□□ 0.62
LINC00486-203ENST00000435075 SYNJ1O43426 1573 aa18.92■□□□□ 0.62
LINC00486-203ENST00000435075 BIVM-ERCC5R4GMW8 1640 aa18.92■□□□□ 0.62
LINC00486-203ENST00000435075 FAM9AQ8IZU1 332 aaPredicted RBP18.85■□□□□ 0.61
LINC00486-203ENST00000435075 FANCD2Q9BXW9 1451 aa18.83■□□□□ 0.6
LINC00486-203ENST00000435075 CUX1P39880 1505 aa18.82■□□□□ 0.6
LINC00486-203ENST00000435075 LOC105371045A0A1W2PR82 267 aa18.81■□□□□ 0.6
LINC00486-203ENST00000435075 PDS5BQ9NTI5 1447 aa18.81■□□□□ 0.6
LINC00486-203ENST00000435075 SOGA1O94964 1423 aa18.78■□□□□ 0.6
LINC00486-203ENST00000435075 CSRNP3Q8WYN3 585 aa18.77■□□□□ 0.6
LINC00486-203ENST00000435075 CEP164Q9UPV0 1460 aa18.74■□□□□ 0.59
LINC00486-203ENST00000435075 NESP48681 1621 aa18.72■□□□□ 0.59
LINC00486-203ENST00000435075 DNMBPQ6XZF7 1577 aa18.71■□□□□ 0.59
LINC00486-203ENST00000435075 KIF27Q86VH2 1401 aa18.68■□□□□ 0.58
LINC00486-203ENST00000435075 DNAJC5BQ9UF47 199 aa18.65■□□□□ 0.58
LINC00486-203ENST00000435075 KIF21BO75037 1637 aa18.65■□□□□ 0.58
LINC00486-203ENST00000435075 GOLGA3Q08378 1498 aa18.64■□□□□ 0.58
LINC00486-203ENST00000435075 RUSC2Q8N2Y8 1516 aa18.64■□□□□ 0.57
LINC00486-203ENST00000435075 TOPBP1Q92547 1522 aa18.62■□□□□ 0.57
LINC00486-203ENST00000435075 FGD5Q6ZNL6 1462 aa18.62■□□□□ 0.57
LINC00486-203ENST00000435075 TNIKQ9UKE5 1360 aa18.6■□□□□ 0.57
LINC00486-203ENST00000435075 KIF21AQ7Z4S6 1674 aa18.55■□□□□ 0.56
LINC00486-203ENST00000435075 ERICH3Q5RHP9 1530 aa18.54■□□□□ 0.56
LINC00486-203ENST00000435075 URB2Q14146 1524 aaKnown RBP18.54■□□□□ 0.56
LINC00486-203ENST00000435075 CUX2O14529 1486 aa18.53■□□□□ 0.56
LINC00486-203ENST00000435075 UBTFP17480 764 aaKnown RBP18.53■□□□□ 0.56
LINC00486-203ENST00000435075 POLA1P09884 1462 aaPredicted RBP18.52■□□□□ 0.56
LINC00486-203ENST00000435075 ABCA10Q8WWZ4 1543 aa18.51■□□□□ 0.55
LINC00486-203ENST00000435075 MRC2Q9UBG0 1479 aa18.51■□□□□ 0.55
LINC00486-203ENST00000435075 PRXQ9BXM0 1461 aa18.5■□□□□ 0.55
LINC00486-203ENST00000435075 EHMT2Q96KQ7 1210 aa18.48■□□□□ 0.55
LINC00486-203ENST00000435075 CEP162Q5TB80 1403 aa18.44■□□□□ 0.54
LINC00486-203ENST00000435075 ERCC6Q03468 1493 aa18.42■□□□□ 0.54
LINC00486-203ENST00000435075 RAPGEF2Q9Y4G8 1499 aa18.42■□□□□ 0.54
LINC00486-203ENST00000435075 IGF1RP08069 1367 aa18.42■□□□□ 0.54
LINC00486-203ENST00000435075 WDR97A6NE52 1622 aa18.39■□□□□ 0.53
LINC00486-203ENST00000435075 WDR62O43379 1518 aa18.39■□□□□ 0.53
LINC00486-203ENST00000435075 RAD54L2Q9Y4B4 1467 aa18.39■□□□□ 0.53
LINC00486-203ENST00000435075 CUL7Q14999 1698 aa18.36■□□□□ 0.53
LINC00486-203ENST00000435075 CARMIL1Q5VZK9 1371 aa18.36■□□□□ 0.53
LINC00486-203ENST00000435075 TARBP1Q13395 1621 aaKnown RBP18.33■□□□□ 0.52
LINC00486-203ENST00000435075 IFT140Q96RY7 1462 aa18.32■□□□□ 0.52
LINC00486-203ENST00000435075 ABCA5Q8WWZ7 1642 aa18.32■□□□□ 0.52
LINC00486-203ENST00000435075 CLIP1P30622 1438 aa18.32■□□□□ 0.52
LINC00486-203ENST00000435075 GAPVD1Q14C86 1478 aa18.31■□□□□ 0.52
LINC00486-203ENST00000435075 THOC2Q8NI27 1593 aaKnown RBP18.26■□□□□ 0.51
LINC00486-203ENST00000435075 TDRD9Q8NDG6 1382 aaKnown RBP18.25■□□□□ 0.51
LINC00486-203ENST00000435075 TRIM26Q12899 539 aaPredicted RBP18.22■□□□□ 0.51
LINC00486-203ENST00000435075 GRIN2BQ13224 1484 aa18.19■□□□□ 0.5
LINC00486-203ENST00000435075 VPS8Q8N3P4 1428 aa18.18■□□□□ 0.5
LINC00486-203ENST00000435075 PBRM1Q86U86 1689 aa18.16■□□□□ 0.5
LINC00486-203ENST00000435075 FHAD1B1AJZ9 1412 aa18.14■□□□□ 0.5
LINC00486-203ENST00000435075 APLP2Q06481 763 aa18.11■□□□□ 0.49
LINC00486-203ENST00000435075 CTTNBP2Q8WZ74 1663 aa18.1■□□□□ 0.49
LINC00486-203ENST00000435075 PCGF6Q9BYE7 350 aa18.1■□□□□ 0.49
LINC00486-203ENST00000435075 AQRO60306 1485 aaKnown RBP eCLIP18.1■□□□□ 0.49
LINC00486-203ENST00000435075 EFCAB5A4FU69 1503 aa18.09■□□□□ 0.49
LINC00486-203ENST00000435075 ADAMTS12P58397 1594 aa18.08■□□□□ 0.48
LINC00486-203ENST00000435075 EIF4G3O43432 1585 aaKnown RBP18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms