RNA–Protein interactions for RNA: ENST00000435039.3

PCOTH-203, Transcript of Pro-X-Gly collagen triple helix like repeat containing, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCOTH, Length 542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOTH-203ENST00000435039 NISCHQ9Y2I1 1504 aa26.43■■□□□ 1.82
PCOTH-203ENST00000435039 CCDC180Q9P1Z9 1646 aa23.32■■□□□ 1.32
PCOTH-203ENST00000435039 ABCC9O60706 1549 aa22.94■■□□□ 1.26
PCOTH-203ENST00000435039 ZCCHC6Q5VYS8 1495 aaKnown RBP22.21■■□□□ 1.15
PCOTH-203ENST00000435039 DCAF1Q9Y4B6 1507 aa21.96■■□□□ 1.11
PCOTH-203ENST00000435039 RB1CC1Q8TDY2 1594 aa21.82■■□□□ 1.08
PCOTH-203ENST00000435039 MYO15BQ96JP2 1530 aa21.81■■□□□ 1.08
PCOTH-203ENST00000435039 NACADO15069 1562 aa21.69■■□□□ 1.06
PCOTH-203ENST00000435039 DNAJC5BQ9UF47 199 aa21.59■■□□□ 1.05
PCOTH-203ENST00000435039 DCAF8L2P0C7V8 631 aa21.56■■□□□ 1.04
PCOTH-203ENST00000435039 UNC13AQ9UPW8 1703 aa21.41■■□□□ 1.02
PCOTH-203ENST00000435039 PABPN1Q86U42 306 aaKnown RBP eCLIP21.31■■□□□ 1
PCOTH-203ENST00000435039 SCRIBQ14160 1630 aa21.24■□□□□ 0.99
PCOTH-203ENST00000435039 BICRAQ9NZM4 1560 aa21.23■□□□□ 0.99
PCOTH-203ENST00000435039 SHROOM4Q9ULL8 1493 aa21.15■□□□□ 0.98
PCOTH-203ENST00000435039 CC2D2AQ9P2K1 1620 aa20.75■□□□□ 0.91
PCOTH-203ENST00000435039 EIF4G1Q04637 1599 aaKnown RBP20.68■□□□□ 0.9
PCOTH-203ENST00000435039 CECR2Q9BXF3 1484 aa20.68■□□□□ 0.9
PCOTH-203ENST00000435039 BAZ1AQ9NRL2 1556 aaPredicted RBP20.47■□□□□ 0.87
PCOTH-203ENST00000435039 SMARCA4P51532 1647 aa20.41■□□□□ 0.86
PCOTH-203ENST00000435039 MROH2BQ7Z745 1585 aa20.35■□□□□ 0.85
PCOTH-203ENST00000435039 RSF1Q96T23 1441 aaPredicted RBP20.34■□□□□ 0.85
PCOTH-203ENST00000435039 PEG3Q9GZU2 1588 aa20.23■□□□□ 0.83
PCOTH-203ENST00000435039 SUPT5HO00267 1087 aaKnown RBP20.19■□□□□ 0.82
PCOTH-203ENST00000435039 WIZO95785 1651 aa20.19■□□□□ 0.82
PCOTH-203ENST00000435039 SMARCA2P51531 1590 aa20.12■□□□□ 0.81
PCOTH-203ENST00000435039 TOP2AP11388 1531 aaKnown RBP20.07■□□□□ 0.8
PCOTH-203ENST00000435039 ATAD2BQ9ULI0 1458 aa20.06■□□□□ 0.8
PCOTH-203ENST00000435039 HMGXB3Q12766 1538 aa20.01■□□□□ 0.79
PCOTH-203ENST00000435039 NCAPD3P42695 1498 aa19.98■□□□□ 0.79
PCOTH-203ENST00000435039 BAZ1BQ9UIG0 1483 aaKnown RBP19.96■□□□□ 0.79
PCOTH-203ENST00000435039 DNAJC5Q9H3Z4 198 aa19.89■□□□□ 0.77
PCOTH-203ENST00000435039 CUX2O14529 1486 aa19.81■□□□□ 0.76
PCOTH-203ENST00000435039 ERCC6Q03468 1493 aa19.8■□□□□ 0.76
PCOTH-203ENST00000435039 CCDC88BA6NC98 1476 aa19.73■□□□□ 0.75
PCOTH-203ENST00000435039 NESP48681 1621 aa19.7■□□□□ 0.74
PCOTH-203ENST00000435039 LAMC3Q9Y6N6 1575 aa19.56■□□□□ 0.72
PCOTH-203ENST00000435039 THOC2Q8NI27 1593 aaKnown RBP19.55■□□□□ 0.72
PCOTH-203ENST00000435039 PRDM2Q13029 1718 aa19.5■□□□□ 0.71
PCOTH-203ENST00000435039 KIF21AQ7Z4S6 1674 aa19.49■□□□□ 0.71
PCOTH-203ENST00000435039 CFTRP13569 1480 aa19.44■□□□□ 0.7
PCOTH-203ENST00000435039 PDS5BQ9NTI5 1447 aa19.41■□□□□ 0.7
PCOTH-203ENST00000435039 CADPSQ9ULU8 1353 aa19.37■□□□□ 0.69
PCOTH-203ENST00000435039 CHIC1Q5VXU3 224 aa19.27■□□□□ 0.68
PCOTH-203ENST00000435039 MRC2Q9UBG0 1479 aa19.27■□□□□ 0.67
PCOTH-203ENST00000435039 ABCC8Q09428 1581 aa19.25■□□□□ 0.67
PCOTH-203ENST00000435039 WDR62O43379 1518 aa19.25■□□□□ 0.67
PCOTH-203ENST00000435039 FANCD2Q9BXW9 1451 aa19.18■□□□□ 0.66
PCOTH-203ENST00000435039 WRNQ14191 1432 aaPredicted RBP eCLIP19.17■□□□□ 0.66
PCOTH-203ENST00000435039 CEP164Q9UPV0 1460 aa19.16■□□□□ 0.66
PCOTH-203ENST00000435039 BIVM-ERCC5R4GMW8 1640 aa19.15■□□□□ 0.66
PCOTH-203ENST00000435039 SYNJ1O43426 1573 aa19.15■□□□□ 0.66
PCOTH-203ENST00000435039 TOP2BQ02880 1626 aa19.13■□□□□ 0.65
PCOTH-203ENST00000435039 CUX1P39880 1505 aa19.08■□□□□ 0.64
PCOTH-203ENST00000435039 TRIM41Q8WV44 630 aa19.07■□□□□ 0.64
PCOTH-203ENST00000435039 DNMBPQ6XZF7 1577 aa19.05■□□□□ 0.64
PCOTH-203ENST00000435039 URB2Q14146 1524 aaKnown RBP19■□□□□ 0.63
PCOTH-203ENST00000435039 TOPBP1Q92547 1522 aa18.96■□□□□ 0.63
PCOTH-203ENST00000435039 FGD5Q6ZNL6 1462 aa18.9■□□□□ 0.62
PCOTH-203ENST00000435039 EEA1Q15075 1411 aa18.86■□□□□ 0.61
PCOTH-203ENST00000435039 OSCARQ8IYS5 282 aa18.86■□□□□ 0.61
PCOTH-203ENST00000435039 POLA1P09884 1462 aaPredicted RBP18.85■□□□□ 0.61
PCOTH-203ENST00000435039 WDR97A6NE52 1622 aa18.82■□□□□ 0.6
PCOTH-203ENST00000435039 IFT140Q96RY7 1462 aa18.78■□□□□ 0.6
PCOTH-203ENST00000435039 SOGA1O94964 1423 aa18.78■□□□□ 0.6
PCOTH-203ENST00000435039 ZNF608Q9ULD9 1512 aaPredicted RBP18.78■□□□□ 0.6
PCOTH-203ENST00000435039 ABCA10Q8WWZ4 1543 aa18.77■□□□□ 0.6
PCOTH-203ENST00000435039 TARBP1Q13395 1621 aaKnown RBP18.74■□□□□ 0.59
PCOTH-203ENST00000435039 KIF27Q86VH2 1401 aa18.73■□□□□ 0.59
PCOTH-203ENST00000435039 RAD54L2Q9Y4B4 1467 aa18.71■□□□□ 0.59
PCOTH-203ENST00000435039 RUSC2Q8N2Y8 1516 aa18.7■□□□□ 0.58
PCOTH-203ENST00000435039 EIF4G3O43432 1585 aaKnown RBP18.7■□□□□ 0.58
PCOTH-203ENST00000435039 RIMBP3CA6NJZ7 1639 aa18.69■□□□□ 0.58
PCOTH-203ENST00000435039 RIMBP3BA6NNM3 1639 aa18.69■□□□□ 0.58
PCOTH-203ENST00000435039 ABCA5Q8WWZ7 1642 aa18.69■□□□□ 0.58
PCOTH-203ENST00000435039 RIMBP3Q9UFD9 1639 aa18.69■□□□□ 0.58
PCOTH-203ENST00000435039 KIF21BO75037 1637 aa18.65■□□□□ 0.58
PCOTH-203ENST00000435039 FAM9AQ8IZU1 332 aaPredicted RBP18.61■□□□□ 0.57
PCOTH-203ENST00000435039 CHD1O14646 1710 aa18.6■□□□□ 0.57
PCOTH-203ENST00000435039 ARHGEF11O15085 1522 aa18.6■□□□□ 0.57
PCOTH-203ENST00000435039 CUL7Q14999 1698 aa18.58■□□□□ 0.57
PCOTH-203ENST00000435039 PBRM1Q86U86 1689 aa18.58■□□□□ 0.57
PCOTH-203ENST00000435039 CSRNP3Q8WYN3 585 aa18.58■□□□□ 0.56
PCOTH-203ENST00000435039 ERICH3Q5RHP9 1530 aa18.58■□□□□ 0.56
PCOTH-203ENST00000435039 AQRO60306 1485 aaKnown RBP eCLIP18.58■□□□□ 0.56
PCOTH-203ENST00000435039 GAPVD1Q14C86 1478 aa18.56■□□□□ 0.56
PCOTH-203ENST00000435039 PRXQ9BXM0 1461 aa18.56■□□□□ 0.56
PCOTH-203ENST00000435039 GOLGA3Q08378 1498 aa18.55■□□□□ 0.56
PCOTH-203ENST00000435039 IGF1RP08069 1367 aa18.5■□□□□ 0.55
PCOTH-203ENST00000435039 TDRD9Q8NDG6 1382 aaKnown RBP18.49■□□□□ 0.55
PCOTH-203ENST00000435039 GRIN2BQ13224 1484 aa18.48■□□□□ 0.55
PCOTH-203ENST00000435039 ADAMTS12P58397 1594 aa18.47■□□□□ 0.55
PCOTH-203ENST00000435039 RAPGEF2Q9Y4G8 1499 aa18.46■□□□□ 0.55
PCOTH-203ENST00000435039 FBLN2P98095 1184 aa18.43■□□□□ 0.54
PCOTH-203ENST00000435039 CYB5RLQ6IPT4 315 aa18.42■□□□□ 0.54
PCOTH-203ENST00000435039 CARMIL1Q5VZK9 1371 aa18.42■□□□□ 0.54
PCOTH-203ENST00000435039 ARAP1Q96P48 1450 aa18.41■□□□□ 0.54
PCOTH-203ENST00000435039 LOC105371045A0A1W2PR82 267 aa18.4■□□□□ 0.54
PCOTH-203ENST00000435039 SNAPC4Q5SXM2 1469 aa18.39■□□□□ 0.54
PCOTH-203ENST00000435039 MAGI1Q96QZ7 1491 aaPredicted RBP18.39■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms