RNA–Protein interactions for RNA: ENST00000434458.5

FAM238B-203, Transcript of family with sequence similarity 238 member B, humanhuman

TSL 3 BASIC

Gene FAM238B, Length 880 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM238B-203ENST00000434458 NISCHQ9Y2I1 1504 aa28.73■■■□□ 2.19
FAM238B-203ENST00000434458 CCDC180Q9P1Z9 1646 aa25.53■■□□□ 1.68
FAM238B-203ENST00000434458 ABCC9O60706 1549 aa25.23■■□□□ 1.63
FAM238B-203ENST00000434458 DCAF8L2P0C7V8 631 aa24.19■■□□□ 1.46
FAM238B-203ENST00000434458 RB1CC1Q8TDY2 1594 aa24.15■■□□□ 1.46
FAM238B-203ENST00000434458 NACADO15069 1562 aa24.08■■□□□ 1.45
FAM238B-203ENST00000434458 ZCCHC6Q5VYS8 1495 aaKnown RBP23.89■■□□□ 1.42
FAM238B-203ENST00000434458 MYO15BQ96JP2 1530 aa23.86■■□□□ 1.41
FAM238B-203ENST00000434458 DCAF1Q9Y4B6 1507 aa23.73■■□□□ 1.39
FAM238B-203ENST00000434458 PABPN1Q86U42 306 aaKnown RBP eCLIP23.6■■□□□ 1.37
FAM238B-203ENST00000434458 UNC13AQ9UPW8 1703 aa23.54■■□□□ 1.36
FAM238B-203ENST00000434458 BICRAQ9NZM4 1560 aa23.42■■□□□ 1.34
FAM238B-203ENST00000434458 SCRIBQ14160 1630 aa23.36■■□□□ 1.33
FAM238B-203ENST00000434458 DNAJC5BQ9UF47 199 aa23.3■■□□□ 1.32
FAM238B-203ENST00000434458 SHROOM4Q9ULL8 1493 aa23.13■■□□□ 1.29
FAM238B-203ENST00000434458 EIF4G1Q04637 1599 aaKnown RBP22.83■■□□□ 1.25
FAM238B-203ENST00000434458 CC2D2AQ9P2K1 1620 aa22.77■■□□□ 1.24
FAM238B-203ENST00000434458 CECR2Q9BXF3 1484 aa22.67■■□□□ 1.22
FAM238B-203ENST00000434458 SMARCA4P51532 1647 aa22.3■■□□□ 1.16
FAM238B-203ENST00000434458 BAZ1AQ9NRL2 1556 aaPredicted RBP22.27■■□□□ 1.16
FAM238B-203ENST00000434458 NCAPD3P42695 1498 aa22.25■■□□□ 1.15
FAM238B-203ENST00000434458 ATAD2BQ9ULI0 1458 aa22.25■■□□□ 1.15
FAM238B-203ENST00000434458 SMARCA2P51531 1590 aa22.19■■□□□ 1.14
FAM238B-203ENST00000434458 MROH2BQ7Z745 1585 aa22.15■■□□□ 1.14
FAM238B-203ENST00000434458 HMGXB3Q12766 1538 aa22.09■■□□□ 1.13
FAM238B-203ENST00000434458 BAZ1BQ9UIG0 1483 aaKnown RBP22.06■■□□□ 1.12
FAM238B-203ENST00000434458 PEG3Q9GZU2 1588 aa22.06■■□□□ 1.12
FAM238B-203ENST00000434458 WIZO95785 1651 aa21.89■■□□□ 1.1
FAM238B-203ENST00000434458 RSF1Q96T23 1441 aaPredicted RBP21.86■■□□□ 1.09
FAM238B-203ENST00000434458 NESP48681 1621 aa21.78■■□□□ 1.08
FAM238B-203ENST00000434458 ERCC6Q03468 1493 aa21.76■■□□□ 1.07
FAM238B-203ENST00000434458 LAMC3Q9Y6N6 1575 aa21.66■■□□□ 1.06
FAM238B-203ENST00000434458 TOP2AP11388 1531 aaKnown RBP21.65■■□□□ 1.06
FAM238B-203ENST00000434458 CADPSQ9ULU8 1353 aa21.62■■□□□ 1.05
FAM238B-203ENST00000434458 PDS5BQ9NTI5 1447 aa21.57■■□□□ 1.04
FAM238B-203ENST00000434458 CUX2O14529 1486 aa21.54■■□□□ 1.04
FAM238B-203ENST00000434458 KIF21AQ7Z4S6 1674 aa21.46■■□□□ 1.03
FAM238B-203ENST00000434458 CFTRP13569 1480 aa21.44■■□□□ 1.02
FAM238B-203ENST00000434458 CCDC88BA6NC98 1476 aa21.42■■□□□ 1.02
FAM238B-203ENST00000434458 THOC2Q8NI27 1593 aaKnown RBP21.42■■□□□ 1.02
FAM238B-203ENST00000434458 FANCD2Q9BXW9 1451 aa21.36■■□□□ 1.01
FAM238B-203ENST00000434458 CEP164Q9UPV0 1460 aa21.34■■□□□ 1.01
FAM238B-203ENST00000434458 MRC2Q9UBG0 1479 aa21.33■■□□□ 1.01
FAM238B-203ENST00000434458 SUPT5HO00267 1087 aaKnown RBP21.29■■□□□ 1
FAM238B-203ENST00000434458 WDR62O43379 1518 aa21.24■□□□□ 0.99
FAM238B-203ENST00000434458 PRDM2Q13029 1718 aa21.17■□□□□ 0.98
FAM238B-203ENST00000434458 URB2Q14146 1524 aaKnown RBP21.14■□□□□ 0.98
FAM238B-203ENST00000434458 DNAJC5Q9H3Z4 198 aa21.09■□□□□ 0.97
FAM238B-203ENST00000434458 TOPBP1Q92547 1522 aa20.99■□□□□ 0.95
FAM238B-203ENST00000434458 ABCC8Q09428 1581 aa20.97■□□□□ 0.95
FAM238B-203ENST00000434458 DNMBPQ6XZF7 1577 aa20.93■□□□□ 0.94
FAM238B-203ENST00000434458 IFT140Q96RY7 1462 aa20.9■□□□□ 0.94
FAM238B-203ENST00000434458 ZNF608Q9ULD9 1512 aaPredicted RBP20.83■□□□□ 0.92
FAM238B-203ENST00000434458 POLA1P09884 1462 aaPredicted RBP20.81■□□□□ 0.92
FAM238B-203ENST00000434458 CUX1P39880 1505 aa20.78■□□□□ 0.92
FAM238B-203ENST00000434458 RAD54L2Q9Y4B4 1467 aa20.75■□□□□ 0.91
FAM238B-203ENST00000434458 SOGA1O94964 1423 aa20.75■□□□□ 0.91
FAM238B-203ENST00000434458 FGD5Q6ZNL6 1462 aa20.75■□□□□ 0.91
FAM238B-203ENST00000434458 TARBP1Q13395 1621 aaKnown RBP20.74■□□□□ 0.91
FAM238B-203ENST00000434458 AQRO60306 1485 aaKnown RBP eCLIP20.71■□□□□ 0.91
FAM238B-203ENST00000434458 EIF4G3O43432 1585 aaKnown RBP20.7■□□□□ 0.9
FAM238B-203ENST00000434458 OSCARQ8IYS5 282 aa20.68■□□□□ 0.9
FAM238B-203ENST00000434458 TDRD9Q8NDG6 1382 aaKnown RBP20.67■□□□□ 0.9
FAM238B-203ENST00000434458 WRNQ14191 1432 aaPredicted RBP eCLIP20.62■□□□□ 0.89
FAM238B-203ENST00000434458 FBLN2P98095 1184 aa20.55■□□□□ 0.88
FAM238B-203ENST00000434458 WDR97A6NE52 1622 aa20.55■□□□□ 0.88
FAM238B-203ENST00000434458 SYNJ1O43426 1573 aa20.55■□□□□ 0.88
FAM238B-203ENST00000434458 TOP2BQ02880 1626 aa20.54■□□□□ 0.88
FAM238B-203ENST00000434458 BIVM-ERCC5R4GMW8 1640 aa20.53■□□□□ 0.88
FAM238B-203ENST00000434458 ABCA10Q8WWZ4 1543 aa20.53■□□□□ 0.88
FAM238B-203ENST00000434458 GRIN2BQ13224 1484 aa20.5■□□□□ 0.87
FAM238B-203ENST00000434458 SNAPC4Q5SXM2 1469 aa20.5■□□□□ 0.87
FAM238B-203ENST00000434458 GAPVD1Q14C86 1478 aa20.5■□□□□ 0.87
FAM238B-203ENST00000434458 CHD1O14646 1710 aa20.45■□□□□ 0.86
FAM238B-203ENST00000434458 CHMP7Q8WUX9 453 aaPredicted RBP20.45■□□□□ 0.86
FAM238B-203ENST00000434458 MAGI1Q96QZ7 1491 aaPredicted RBP20.44■□□□□ 0.86
FAM238B-203ENST00000434458 ABCA5Q8WWZ7 1642 aa20.42■□□□□ 0.86
FAM238B-203ENST00000434458 PBRM1Q86U86 1689 aa20.39■□□□□ 0.86
FAM238B-203ENST00000434458 TRIM41Q8WV44 630 aa20.39■□□□□ 0.85
FAM238B-203ENST00000434458 SYNJ2O15056 1496 aa20.37■□□□□ 0.85
FAM238B-203ENST00000434458 ARHGEF11O15085 1522 aa20.3■□□□□ 0.84
FAM238B-203ENST00000434458 RIMBP3CA6NJZ7 1639 aa20.3■□□□□ 0.84
FAM238B-203ENST00000434458 RIMBP3BA6NNM3 1639 aa20.3■□□□□ 0.84
FAM238B-203ENST00000434458 RIMBP3Q9UFD9 1639 aa20.3■□□□□ 0.84
FAM238B-203ENST00000434458 ERICH3Q5RHP9 1530 aa20.26■□□□□ 0.83
FAM238B-203ENST00000434458 ADAMTS12P58397 1594 aa20.25■□□□□ 0.83
FAM238B-203ENST00000434458 FHAD1B1AJZ9 1412 aa20.25■□□□□ 0.83
FAM238B-203ENST00000434458 CLASP1Q7Z460 1538 aa20.24■□□□□ 0.83
FAM238B-203ENST00000434458 GRIN2AQ12879 1464 aa20.24■□□□□ 0.83
FAM238B-203ENST00000434458 KIF27Q86VH2 1401 aa20.2■□□□□ 0.82
FAM238B-203ENST00000434458 CYB5RLQ6IPT4 315 aa20.19■□□□□ 0.82
FAM238B-203ENST00000434458 IGF1RP08069 1367 aa20.15■□□□□ 0.82
FAM238B-203ENST00000434458 NUP160Q12769 1436 aa20.14■□□□□ 0.81
FAM238B-203ENST00000434458 ARAP1Q96P48 1450 aa20.13■□□□□ 0.81
FAM238B-203ENST00000434458 CEP170Q5SW79 1584 aa20.12■□□□□ 0.81
FAM238B-203ENST00000434458 CUL7Q14999 1698 aa20.03■□□□□ 0.8
FAM238B-203ENST00000434458 CARMIL1Q5VZK9 1371 aa20.03■□□□□ 0.8
FAM238B-203ENST00000434458 JPH4Q96JJ6 628 aa20■□□□□ 0.79
FAM238B-203ENST00000434458 RUSC2Q8N2Y8 1516 aa19.99■□□□□ 0.79
FAM238B-203ENST00000434458 ERCC6L2Q5T890 1561 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms