RNA–Protein interactions for RNA: ENST00000434027.2

RGMB-202, Transcript of repulsive guidance molecule BMP co-receptor b, humanhuman

TSL 2

Gene RGMB, Length 2,513 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGMB-202ENST00000434027 NISCHQ9Y2I1 1504 aa39.5■■■■□ 3.91
RGMB-202ENST00000434027 CCDC180Q9P1Z9 1646 aa34.08■■■■□ 3.05
RGMB-202ENST00000434027 ZCCHC6Q5VYS8 1495 aaKnown RBP33.24■■■□□ 2.91
RGMB-202ENST00000434027 DCAF8L2P0C7V8 631 aa32.78■■■□□ 2.84
RGMB-202ENST00000434027 SHROOM4Q9ULL8 1493 aa32.77■■■□□ 2.84
RGMB-202ENST00000434027 DCAF1Q9Y4B6 1507 aa32.54■■■□□ 2.8
RGMB-202ENST00000434027 ABCC9O60706 1549 aa32.13■■■□□ 2.73
RGMB-202ENST00000434027 MYO15BQ96JP2 1530 aa31.98■■■□□ 2.71
RGMB-202ENST00000434027 SUPT5HO00267 1087 aaKnown RBP31.75■■■□□ 2.67
RGMB-202ENST00000434027 NACADO15069 1562 aa31.72■■■□□ 2.67
RGMB-202ENST00000434027 SCRIBQ14160 1630 aa31.61■■■□□ 2.65
RGMB-202ENST00000434027 RB1CC1Q8TDY2 1594 aa31.36■■■□□ 2.61
RGMB-202ENST00000434027 RSF1Q96T23 1441 aaPredicted RBP30.87■■■□□ 2.53
RGMB-202ENST00000434027 CECR2Q9BXF3 1484 aa30.77■■■□□ 2.52
RGMB-202ENST00000434027 UNC13AQ9UPW8 1703 aa30.75■■■□□ 2.51
RGMB-202ENST00000434027 MROH2BQ7Z745 1585 aa30.59■■■□□ 2.49
RGMB-202ENST00000434027 CHIC1Q5VXU3 224 aa30.53■■■□□ 2.48
RGMB-202ENST00000434027 PABPN1Q86U42 306 aaKnown RBP eCLIP30.49■■■□□ 2.47
RGMB-202ENST00000434027 BICRAQ9NZM4 1560 aa30.47■■■□□ 2.47
RGMB-202ENST00000434027 BAZ1AQ9NRL2 1556 aaPredicted RBP30.43■■■□□ 2.46
RGMB-202ENST00000434027 WIZO95785 1651 aa30.35■■■□□ 2.45
RGMB-202ENST00000434027 SMARCA4P51532 1647 aa30.25■■■□□ 2.43
RGMB-202ENST00000434027 TOP2AP11388 1531 aaKnown RBP29.97■■■□□ 2.39
RGMB-202ENST00000434027 PEG3Q9GZU2 1588 aa29.8■■■□□ 2.36
RGMB-202ENST00000434027 CCDC88BA6NC98 1476 aa29.77■■■□□ 2.36
RGMB-202ENST00000434027 TRIM41Q8WV44 630 aa29.75■■■□□ 2.35
RGMB-202ENST00000434027 SMARCA2P51531 1590 aa29.73■■■□□ 2.35
RGMB-202ENST00000434027 ATAD2BQ9ULI0 1458 aa29.7■■■□□ 2.34
RGMB-202ENST00000434027 EIF4G1Q04637 1599 aaKnown RBP29.61■■■□□ 2.33
RGMB-202ENST00000434027 BAZ1BQ9UIG0 1483 aaKnown RBP29.55■■■□□ 2.32
RGMB-202ENST00000434027 LOC105371045A0A1W2PR82 267 aa29.49■■■□□ 2.31
RGMB-202ENST00000434027 NCAPD3P42695 1498 aa29.34■■■□□ 2.29
RGMB-202ENST00000434027 FAM9AQ8IZU1 332 aaPredicted RBP29.33■■■□□ 2.29
RGMB-202ENST00000434027 ABCC8Q09428 1581 aa29.31■■■□□ 2.28
RGMB-202ENST00000434027 HMGXB3Q12766 1538 aa29.26■■■□□ 2.28
RGMB-202ENST00000434027 WRNQ14191 1432 aaPredicted RBP eCLIP29.03■■■□□ 2.24
RGMB-202ENST00000434027 CC2D2AQ9P2K1 1620 aa28.99■■■□□ 2.23
RGMB-202ENST00000434027 EHMT2Q96KQ7 1210 aa28.99■■■□□ 2.23
RGMB-202ENST00000434027 SOGA1O94964 1423 aa28.89■■■□□ 2.22
RGMB-202ENST00000434027 SYNJ1O43426 1573 aa28.88■■■□□ 2.21
RGMB-202ENST00000434027 CFTRP13569 1480 aa28.82■■■□□ 2.2
RGMB-202ENST00000434027 RUSC2Q8N2Y8 1516 aa28.76■■■□□ 2.19
RGMB-202ENST00000434027 EEA1Q15075 1411 aa28.75■■■□□ 2.19
RGMB-202ENST00000434027 CSRNP3Q8WYN3 585 aa28.71■■■□□ 2.19
RGMB-202ENST00000434027 TOP2BQ02880 1626 aa28.67■■■□□ 2.18
RGMB-202ENST00000434027 CADPSQ9ULU8 1353 aa28.67■■■□□ 2.18
RGMB-202ENST00000434027 BIVM-ERCC5R4GMW8 1640 aa28.59■■■□□ 2.17
RGMB-202ENST00000434027 PCGF6Q9BYE7 350 aa28.57■■■□□ 2.16
RGMB-202ENST00000434027 CUX1P39880 1505 aa28.56■■■□□ 2.16
RGMB-202ENST00000434027 PRDM2Q13029 1718 aa28.53■■■□□ 2.16
RGMB-202ENST00000434027 TNIKQ9UKE5 1360 aa28.45■■■□□ 2.14
RGMB-202ENST00000434027 UBTFP17480 764 aaKnown RBP28.44■■■□□ 2.14
RGMB-202ENST00000434027 GOLGA3Q08378 1498 aa28.43■■■□□ 2.14
RGMB-202ENST00000434027 CEP164Q9UPV0 1460 aa28.39■■■□□ 2.14
RGMB-202ENST00000434027 DNAJC5BQ9UF47 199 aa28.37■■■□□ 2.13
RGMB-202ENST00000434027 CEP162Q5TB80 1403 aa28.36■■■□□ 2.13
RGMB-202ENST00000434027 TRIM26Q12899 539 aaPredicted RBP28.36■■■□□ 2.13
RGMB-202ENST00000434027 FANCD2Q9BXW9 1451 aa28.35■■■□□ 2.13
RGMB-202ENST00000434027 NESP48681 1621 aa28.35■■■□□ 2.13
RGMB-202ENST00000434027 KIF21BO75037 1637 aa28.34■■■□□ 2.13
RGMB-202ENST00000434027 KIF27Q86VH2 1401 aa28.25■■■□□ 2.11
RGMB-202ENST00000434027 RAPGEF2Q9Y4G8 1499 aa28.24■■■□□ 2.11
RGMB-202ENST00000434027 LAMC3Q9Y6N6 1575 aa28.22■■■□□ 2.11
RGMB-202ENST00000434027 FGD5Q6ZNL6 1462 aa28.19■■■□□ 2.1
RGMB-202ENST00000434027 PRXQ9BXM0 1461 aa28.15■■■□□ 2.1
RGMB-202ENST00000434027 PPARGC1BQ86YN6 1023 aaKnown RBP28.14■■■□□ 2.09
RGMB-202ENST00000434027 CUX2O14529 1486 aa28.11■■■□□ 2.09
RGMB-202ENST00000434027 DNMBPQ6XZF7 1577 aa28.1■■■□□ 2.09
RGMB-202ENST00000434027 ERICH3Q5RHP9 1530 aa28.08■■■□□ 2.09
RGMB-202ENST00000434027 TOPBP1Q92547 1522 aa28.07■■■□□ 2.08
RGMB-202ENST00000434027 PDS5BQ9NTI5 1447 aa28.06■■■□□ 2.08
RGMB-202ENST00000434027 CLIP1P30622 1438 aa28.05■■■□□ 2.08
RGMB-202ENST00000434027 HRCP23327 699 aa28.01■■■□□ 2.07
RGMB-202ENST00000434027 IGF1RP08069 1367 aa28■■■□□ 2.07
RGMB-202ENST00000434027 POLA1P09884 1462 aaPredicted RBP27.99■■■□□ 2.07
RGMB-202ENST00000434027 URB2Q14146 1524 aaKnown RBP27.98■■■□□ 2.07
RGMB-202ENST00000434027 RANGAP1P46060 587 aaPredicted RBP27.97■■■□□ 2.07
RGMB-202ENST00000434027 RAD54L2Q9Y4B4 1467 aa27.97■■■□□ 2.07
RGMB-202ENST00000434027 ABCA10Q8WWZ4 1543 aa27.9■■■□□ 2.06
RGMB-202ENST00000434027 KIF21AQ7Z4S6 1674 aa27.89■■■□□ 2.05
RGMB-202ENST00000434027 CARMIL1Q5VZK9 1371 aa27.86■■■□□ 2.05
RGMB-202ENST00000434027 TTBK1Q5TCY1 1321 aaPredicted RBP27.84■■■□□ 2.05
RGMB-202ENST00000434027 VPS8Q8N3P4 1428 aa27.83■■■□□ 2.05
RGMB-202ENST00000434027 TDRD9Q8NDG6 1382 aaKnown RBP27.7■■■□□ 2.02
RGMB-202ENST00000434027 ARAP1Q96P48 1450 aa27.69■■■□□ 2.02
RGMB-202ENST00000434027 WDR97A6NE52 1622 aa27.69■■■□□ 2.02
RGMB-202ENST00000434027 MRC2Q9UBG0 1479 aa27.66■■■□□ 2.02
RGMB-202ENST00000434027 APLP2Q06481 763 aa27.65■■■□□ 2.02
RGMB-202ENST00000434027 ARHGAP35Q9NRY4 1499 aa27.62■■■□□ 2.01
RGMB-202ENST00000434027 GAPVD1Q14C86 1478 aa27.61■■■□□ 2.01
RGMB-202ENST00000434027 ABCA5Q8WWZ7 1642 aa27.6■■■□□ 2.01
RGMB-202ENST00000434027 CUL7Q14999 1698 aa27.59■■■□□ 2.01
RGMB-202ENST00000434027 TARBP1Q13395 1621 aaKnown RBP27.58■■■□□ 2.01
RGMB-202ENST00000434027 ERCC6Q03468 1493 aa27.47■■□□□ 1.99
RGMB-202ENST00000434027 WDR62O43379 1518 aa27.46■■□□□ 1.99
RGMB-202ENST00000434027 AQRO60306 1485 aaKnown RBP eCLIP27.42■■□□□ 1.98
RGMB-202ENST00000434027 IFT140Q96RY7 1462 aa27.38■■□□□ 1.97
RGMB-202ENST00000434027 ZEB1P37275 1124 aaPredicted RBP27.38■■□□□ 1.97
RGMB-202ENST00000434027 KANK4Q5T7N3 995 aaPredicted RBP27.37■■□□□ 1.97
RGMB-202ENST00000434027 P3H3Q8IVL6 736 aa27.37■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms