RNA–Protein interactions for RNA: ENST00000433008.1

LINC01353-202, Transcript of long intergenic non-protein coding RNA 1353, humanhuman

TSL 2

Gene LINC01353, Length 354 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01353-202ENST00000433008 NISCHQ9Y2I1 1504 aa17.47■□□□□ 0.39
LINC01353-202ENST00000433008 CCDC180Q9P1Z9 1646 aa15.48■□□□□ 0.07
LINC01353-202ENST00000433008 ABCC9O60706 1549 aa14.73□□□□□ -0.05
LINC01353-202ENST00000433008 ZCCHC6Q5VYS8 1495 aaKnown RBP14.63□□□□□ -0.07
LINC01353-202ENST00000433008 DCAF1Q9Y4B6 1507 aa14.47□□□□□ -0.09
LINC01353-202ENST00000433008 MYO15BQ96JP2 1530 aa14.41□□□□□ -0.1
LINC01353-202ENST00000433008 NACADO15069 1562 aa14.39□□□□□ -0.11
LINC01353-202ENST00000433008 RB1CC1Q8TDY2 1594 aa14.34□□□□□ -0.11
LINC01353-202ENST00000433008 DCAF8L2P0C7V8 631 aa14.33□□□□□ -0.12
LINC01353-202ENST00000433008 UNC13AQ9UPW8 1703 aa14.21□□□□□ -0.13
LINC01353-202ENST00000433008 SCRIBQ14160 1630 aa14.1□□□□□ -0.15
LINC01353-202ENST00000433008 BICRAQ9NZM4 1560 aa13.96□□□□□ -0.18
LINC01353-202ENST00000433008 SHROOM4Q9ULL8 1493 aa13.94□□□□□ -0.18
LINC01353-202ENST00000433008 PABPN1Q86U42 306 aaKnown RBP eCLIP13.76□□□□□ -0.21
LINC01353-202ENST00000433008 CECR2Q9BXF3 1484 aa13.57□□□□□ -0.24
LINC01353-202ENST00000433008 SMARCA4P51532 1647 aa13.53□□□□□ -0.24
LINC01353-202ENST00000433008 EIF4G1Q04637 1599 aaKnown RBP13.51□□□□□ -0.25
LINC01353-202ENST00000433008 BAZ1AQ9NRL2 1556 aaPredicted RBP13.51□□□□□ -0.25
LINC01353-202ENST00000433008 MROH2BQ7Z745 1585 aa13.49□□□□□ -0.25
LINC01353-202ENST00000433008 WIZO95785 1651 aa13.41□□□□□ -0.26
LINC01353-202ENST00000433008 RSF1Q96T23 1441 aaPredicted RBP13.4□□□□□ -0.26
LINC01353-202ENST00000433008 CC2D2AQ9P2K1 1620 aa13.39□□□□□ -0.27
LINC01353-202ENST00000433008 PEG3Q9GZU2 1588 aa13.39□□□□□ -0.27
LINC01353-202ENST00000433008 SMARCA2P51531 1590 aa13.32□□□□□ -0.28
LINC01353-202ENST00000433008 ATAD2BQ9ULI0 1458 aa13.31□□□□□ -0.28
LINC01353-202ENST00000433008 HMGXB3Q12766 1538 aa13.25□□□□□ -0.29
LINC01353-202ENST00000433008 NCAPD3P42695 1498 aa13.25□□□□□ -0.29
LINC01353-202ENST00000433008 SUPT5HO00267 1087 aaKnown RBP13.24□□□□□ -0.29
LINC01353-202ENST00000433008 TOP2AP11388 1531 aaKnown RBP13.23□□□□□ -0.29
LINC01353-202ENST00000433008 DNAJC5BQ9UF47 199 aa13.23□□□□□ -0.29
LINC01353-202ENST00000433008 BAZ1BQ9UIG0 1483 aaKnown RBP13.21□□□□□ -0.3
LINC01353-202ENST00000433008 CCDC88BA6NC98 1476 aa13.04□□□□□ -0.32
LINC01353-202ENST00000433008 PRDM2Q13029 1718 aa13□□□□□ -0.33
LINC01353-202ENST00000433008 LAMC3Q9Y6N6 1575 aa12.9□□□□□ -0.35
LINC01353-202ENST00000433008 CFTRP13569 1480 aa12.87□□□□□ -0.35
LINC01353-202ENST00000433008 NESP48681 1621 aa12.87□□□□□ -0.35
LINC01353-202ENST00000433008 CADPSQ9ULU8 1353 aa12.84□□□□□ -0.35
LINC01353-202ENST00000433008 KIF21AQ7Z4S6 1674 aa12.83□□□□□ -0.36
LINC01353-202ENST00000433008 FANCD2Q9BXW9 1451 aa12.73□□□□□ -0.37
LINC01353-202ENST00000433008 ABCC8Q09428 1581 aa12.72□□□□□ -0.37
LINC01353-202ENST00000433008 PDS5BQ9NTI5 1447 aa12.71□□□□□ -0.38
LINC01353-202ENST00000433008 DNAJC5Q9H3Z4 198 aa12.7□□□□□ -0.38
LINC01353-202ENST00000433008 CEP164Q9UPV0 1460 aa12.69□□□□□ -0.38
LINC01353-202ENST00000433008 BIVM-ERCC5R4GMW8 1640 aa12.66□□□□□ -0.38
LINC01353-202ENST00000433008 THOC2Q8NI27 1593 aaKnown RBP12.66□□□□□ -0.38
LINC01353-202ENST00000433008 SYNJ1O43426 1573 aa12.64□□□□□ -0.39
LINC01353-202ENST00000433008 CUX1P39880 1505 aa12.63□□□□□ -0.39
LINC01353-202ENST00000433008 URB2Q14146 1524 aaKnown RBP12.62□□□□□ -0.39
LINC01353-202ENST00000433008 TOP2BQ02880 1626 aa12.62□□□□□ -0.39
LINC01353-202ENST00000433008 DNMBPQ6XZF7 1577 aa12.62□□□□□ -0.39
LINC01353-202ENST00000433008 ERCC6Q03468 1493 aa12.62□□□□□ -0.39
LINC01353-202ENST00000433008 WRNQ14191 1432 aaPredicted RBP eCLIP12.61□□□□□ -0.39
LINC01353-202ENST00000433008 MRC2Q9UBG0 1479 aa12.6□□□□□ -0.39
LINC01353-202ENST00000433008 WDR62O43379 1518 aa12.59□□□□□ -0.39
LINC01353-202ENST00000433008 TOPBP1Q92547 1522 aa12.59□□□□□ -0.39
LINC01353-202ENST00000433008 AEBP2Q6ZN18 517 aaPredicted RBP12.58□□□□□ -0.4
LINC01353-202ENST00000433008 CHIC1Q5VXU3 224 aa12.57□□□□□ -0.4
LINC01353-202ENST00000433008 WDR97A6NE52 1622 aa12.52□□□□□ -0.4
LINC01353-202ENST00000433008 FGD5Q6ZNL6 1462 aa12.52□□□□□ -0.41
LINC01353-202ENST00000433008 POLA1P09884 1462 aaPredicted RBP12.49□□□□□ -0.41
LINC01353-202ENST00000433008 TARBP1Q13395 1621 aaKnown RBP12.48□□□□□ -0.41
LINC01353-202ENST00000433008 TRIM41Q8WV44 630 aa12.47□□□□□ -0.41
LINC01353-202ENST00000433008 CUX2O14529 1486 aa12.46□□□□□ -0.41
LINC01353-202ENST00000433008 RAD54L2Q9Y4B4 1467 aa12.44□□□□□ -0.42
LINC01353-202ENST00000433008 SOGA1O94964 1423 aa12.41□□□□□ -0.42
LINC01353-202ENST00000433008 ABCA10Q8WWZ4 1543 aa12.4□□□□□ -0.42
LINC01353-202ENST00000433008 ABCA5Q8WWZ7 1642 aa12.4□□□□□ -0.42
LINC01353-202ENST00000433008 IFT140Q96RY7 1462 aa12.39□□□□□ -0.43
LINC01353-202ENST00000433008 PBRM1Q86U86 1689 aa12.38□□□□□ -0.43
LINC01353-202ENST00000433008 RUSC2Q8N2Y8 1516 aa12.37□□□□□ -0.43
LINC01353-202ENST00000433008 EIF4G3O43432 1585 aaKnown RBP12.36□□□□□ -0.43
LINC01353-202ENST00000433008 ZNF608Q9ULD9 1512 aaPredicted RBP12.34□□□□□ -0.43
LINC01353-202ENST00000433008 KIF27Q86VH2 1401 aa12.3□□□□□ -0.44
LINC01353-202ENST00000433008 TDRD9Q8NDG6 1382 aaKnown RBP12.3□□□□□ -0.44
LINC01353-202ENST00000433008 GAPVD1Q14C86 1478 aa12.29□□□□□ -0.44
LINC01353-202ENST00000433008 EEA1Q15075 1411 aa12.28□□□□□ -0.44
LINC01353-202ENST00000433008 AQRO60306 1485 aaKnown RBP eCLIP12.28□□□□□ -0.44
LINC01353-202ENST00000433008 ERICH3Q5RHP9 1530 aa12.27□□□□□ -0.45
LINC01353-202ENST00000433008 CUL7Q14999 1698 aa12.26□□□□□ -0.45
LINC01353-202ENST00000433008 ADAMTS12P58397 1594 aa12.24□□□□□ -0.45
LINC01353-202ENST00000433008 GRIN2BQ13224 1484 aa12.24□□□□□ -0.45
LINC01353-202ENST00000433008 KIF21BO75037 1637 aa12.22□□□□□ -0.45
LINC01353-202ENST00000433008 IGF1RP08069 1367 aa12.22□□□□□ -0.45
LINC01353-202ENST00000433008 FAM9AQ8IZU1 332 aaPredicted RBP12.22□□□□□ -0.45
LINC01353-202ENST00000433008 CHD1O14646 1710 aa12.22□□□□□ -0.45
LINC01353-202ENST00000433008 SNAPC4Q5SXM2 1469 aa12.2□□□□□ -0.46
LINC01353-202ENST00000433008 CSRNP3Q8WYN3 585 aa12.19□□□□□ -0.46
LINC01353-202ENST00000433008 MAGI1Q96QZ7 1491 aaPredicted RBP12.19□□□□□ -0.46
LINC01353-202ENST00000433008 PRXQ9BXM0 1461 aa12.19□□□□□ -0.46
LINC01353-202ENST00000433008 CTTNBP2Q8WZ74 1663 aa12.16□□□□□ -0.46
LINC01353-202ENST00000433008 CARMIL1Q5VZK9 1371 aa12.15□□□□□ -0.46
LINC01353-202ENST00000433008 FHAD1B1AJZ9 1412 aa12.14□□□□□ -0.47
LINC01353-202ENST00000433008 RAPGEF2Q9Y4G8 1499 aa12.14□□□□□ -0.47
LINC01353-202ENST00000433008 SYNJ2O15056 1496 aa12.13□□□□□ -0.47
LINC01353-202ENST00000433008 GRIN2AQ12879 1464 aa12.11□□□□□ -0.47
LINC01353-202ENST00000433008 GOLGA3Q08378 1498 aa12.1□□□□□ -0.47
LINC01353-202ENST00000433008 CEP170Q5SW79 1584 aa12.09□□□□□ -0.47
LINC01353-202ENST00000433008 LOC105371045A0A1W2PR82 267 aa12.05□□□□□ -0.48
LINC01353-202ENST00000433008 NUP160Q12769 1436 aa12.03□□□□□ -0.48
LINC01353-202ENST00000433008 EHMT2Q96KQ7 1210 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms