RNA–Protein interactions for RNA: ENST00000432909.2

TSC2-205, Transcript of TSC complex subunit 2, humanhuman

TSL 3

Gene TSC2, Length 374 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-205ENST00000432909 NISCHQ9Y2I1 1504 aa44.14■■■■■ 4.66
TSC2-205ENST00000432909 CCDC180Q9P1Z9 1646 aa39.1■■■■□ 3.85
TSC2-205ENST00000432909 ABCC9O60706 1549 aa37.9■■■■□ 3.66
TSC2-205ENST00000432909 ZCCHC6Q5VYS8 1495 aaKnown RBP36.82■■■■□ 3.49
TSC2-205ENST00000432909 DCAF8L2P0C7V8 631 aa36.7■■■■□ 3.47
TSC2-205ENST00000432909 NACADO15069 1562 aa36.67■■■■□ 3.46
TSC2-205ENST00000432909 RB1CC1Q8TDY2 1594 aa36.61■■■■□ 3.45
TSC2-205ENST00000432909 MYO15BQ96JP2 1530 aa36.57■■■■□ 3.44
TSC2-205ENST00000432909 DCAF1Q9Y4B6 1507 aa36.54■■■■□ 3.44
TSC2-205ENST00000432909 UNC13AQ9UPW8 1703 aa35.88■■■■□ 3.33
TSC2-205ENST00000432909 SCRIBQ14160 1630 aa35.67■■■■□ 3.3
TSC2-205ENST00000432909 BICRAQ9NZM4 1560 aa35.54■■■■□ 3.28
TSC2-205ENST00000432909 PABPN1Q86U42 306 aaKnown RBP eCLIP35.48■■■■□ 3.27
TSC2-205ENST00000432909 SHROOM4Q9ULL8 1493 aa35.14■■■■□ 3.22
TSC2-205ENST00000432909 EIF4G1Q04637 1599 aaKnown RBP34.54■■■■□ 3.12
TSC2-205ENST00000432909 DNAJC5BQ9UF47 199 aa34.54■■■■□ 3.12
TSC2-205ENST00000432909 CECR2Q9BXF3 1484 aa34.35■■■■□ 3.09
TSC2-205ENST00000432909 CC2D2AQ9P2K1 1620 aa34.33■■■■□ 3.09
TSC2-205ENST00000432909 SMARCA4P51532 1647 aa34.17■■■■□ 3.06
TSC2-205ENST00000432909 BAZ1AQ9NRL2 1556 aaPredicted RBP34.17■■■■□ 3.06
TSC2-205ENST00000432909 MROH2BQ7Z745 1585 aa34.02■■■■□ 3.04
TSC2-205ENST00000432909 ATAD2BQ9ULI0 1458 aa33.9■■■■□ 3.02
TSC2-205ENST00000432909 SMARCA2P51531 1590 aa33.86■■■■□ 3.01
TSC2-205ENST00000432909 PEG3Q9GZU2 1588 aa33.85■■■■□ 3.01
TSC2-205ENST00000432909 NCAPD3P42695 1498 aa33.84■■■■□ 3.01
TSC2-205ENST00000432909 RSF1Q96T23 1441 aaPredicted RBP33.75■■■□□ 2.99
TSC2-205ENST00000432909 WIZO95785 1651 aa33.69■■■□□ 2.98
TSC2-205ENST00000432909 HMGXB3Q12766 1538 aa33.69■■■□□ 2.98
TSC2-205ENST00000432909 BAZ1BQ9UIG0 1483 aaKnown RBP33.62■■■□□ 2.97
TSC2-205ENST00000432909 TOP2AP11388 1531 aaKnown RBP33.32■■■□□ 2.92
TSC2-205ENST00000432909 SUPT5HO00267 1087 aaKnown RBP33.11■■■□□ 2.89
TSC2-205ENST00000432909 CCDC88BA6NC98 1476 aa32.94■■■□□ 2.86
TSC2-205ENST00000432909 NESP48681 1621 aa32.91■■■□□ 2.86
TSC2-205ENST00000432909 LAMC3Q9Y6N6 1575 aa32.88■■■□□ 2.85
TSC2-205ENST00000432909 CADPSQ9ULU8 1353 aa32.85■■■□□ 2.85
TSC2-205ENST00000432909 CFTRP13569 1480 aa32.74■■■□□ 2.83
TSC2-205ENST00000432909 PDS5BQ9NTI5 1447 aa32.63■■■□□ 2.81
TSC2-205ENST00000432909 ERCC6Q03468 1493 aa32.61■■■□□ 2.81
TSC2-205ENST00000432909 PRDM2Q13029 1718 aa32.57■■■□□ 2.8
TSC2-205ENST00000432909 KIF21AQ7Z4S6 1674 aa32.56■■■□□ 2.8
TSC2-205ENST00000432909 FANCD2Q9BXW9 1451 aa32.47■■■□□ 2.79
TSC2-205ENST00000432909 CEP164Q9UPV0 1460 aa32.39■■■□□ 2.78
TSC2-205ENST00000432909 THOC2Q8NI27 1593 aaKnown RBP32.35■■■□□ 2.77
TSC2-205ENST00000432909 MRC2Q9UBG0 1479 aa32.28■■■□□ 2.76
TSC2-205ENST00000432909 WDR62O43379 1518 aa32.18■■■□□ 2.74
TSC2-205ENST00000432909 CUX2O14529 1486 aa32.17■■■□□ 2.74
TSC2-205ENST00000432909 URB2Q14146 1524 aaKnown RBP32.14■■■□□ 2.74
TSC2-205ENST00000432909 ABCC8Q09428 1581 aa32.02■■■□□ 2.72
TSC2-205ENST00000432909 TOPBP1Q92547 1522 aa32■■■□□ 2.71
TSC2-205ENST00000432909 DNMBPQ6XZF7 1577 aa31.99■■■□□ 2.71
TSC2-205ENST00000432909 CUX1P39880 1505 aa31.9■■■□□ 2.7
TSC2-205ENST00000432909 WRNQ14191 1432 aaPredicted RBP eCLIP31.79■■■□□ 2.68
TSC2-205ENST00000432909 POLA1P09884 1462 aaPredicted RBP31.74■■■□□ 2.67
TSC2-205ENST00000432909 SYNJ1O43426 1573 aa31.72■■■□□ 2.67
TSC2-205ENST00000432909 FGD5Q6ZNL6 1462 aa31.72■■■□□ 2.67
TSC2-205ENST00000432909 BIVM-ERCC5R4GMW8 1640 aa31.71■■■□□ 2.67
TSC2-205ENST00000432909 TOP2BQ02880 1626 aa31.71■■■□□ 2.67
TSC2-205ENST00000432909 IFT140Q96RY7 1462 aa31.7■■■□□ 2.66
TSC2-205ENST00000432909 TARBP1Q13395 1621 aaKnown RBP31.65■■■□□ 2.66
TSC2-205ENST00000432909 SOGA1O94964 1423 aa31.63■■■□□ 2.65
TSC2-205ENST00000432909 RAD54L2Q9Y4B4 1467 aa31.61■■■□□ 2.65
TSC2-205ENST00000432909 ZNF608Q9ULD9 1512 aaPredicted RBP31.54■■■□□ 2.64
TSC2-205ENST00000432909 WDR97A6NE52 1622 aa31.47■■■□□ 2.63
TSC2-205ENST00000432909 ABCA10Q8WWZ4 1543 aa31.44■■■□□ 2.62
TSC2-205ENST00000432909 EIF4G3O43432 1585 aaKnown RBP31.43■■■□□ 2.62
TSC2-205ENST00000432909 AQRO60306 1485 aaKnown RBP eCLIP31.41■■■□□ 2.625e-6■■□□□ 14.3
TSC2-205ENST00000432909 TDRD9Q8NDG6 1382 aaKnown RBP31.4■■■□□ 2.62
TSC2-205ENST00000432909 ABCA5Q8WWZ7 1642 aa31.29■■■□□ 2.6
TSC2-205ENST00000432909 TRIM41Q8WV44 630 aa31.27■■■□□ 2.6
TSC2-205ENST00000432909 GAPVD1Q14C86 1478 aa31.27■■■□□ 2.6
TSC2-205ENST00000432909 GRIN2BQ13224 1484 aa31.21■■■□□ 2.59
TSC2-205ENST00000432909 PBRM1Q86U86 1689 aa31.2■■■□□ 2.59
TSC2-205ENST00000432909 CHIC1Q5VXU3 224 aa31.14■■■□□ 2.58
TSC2-205ENST00000432909 SNAPC4Q5SXM2 1469 aa31.11■■■□□ 2.57
TSC2-205ENST00000432909 KIF27Q86VH2 1401 aa31.09■■■□□ 2.57
TSC2-205ENST00000432909 MAGI1Q96QZ7 1491 aaPredicted RBP31.08■■■□□ 2.57
TSC2-205ENST00000432909 ERICH3Q5RHP9 1530 aa31.06■■■□□ 2.56
TSC2-205ENST00000432909 CHD1O14646 1710 aa31.01■■■□□ 2.55
TSC2-205ENST00000432909 SYNJ2O15056 1496 aa30.96■■■□□ 2.55
TSC2-205ENST00000432909 IGF1RP08069 1367 aa30.96■■■□□ 2.55
TSC2-205ENST00000432909 RUSC2Q8N2Y8 1516 aa30.96■■■□□ 2.55
TSC2-205ENST00000432909 ADAMTS12P58397 1594 aa30.95■■■□□ 2.54
TSC2-205ENST00000432909 FBLN2P98095 1184 aa30.93■■■□□ 2.54
TSC2-205ENST00000432909 OSCARQ8IYS5 282 aa30.92■■■□□ 2.54
TSC2-205ENST00000432909 CHMP7Q8WUX9 453 aaPredicted RBP30.92■■■□□ 2.54
TSC2-205ENST00000432909 FHAD1B1AJZ9 1412 aa30.9■■■□□ 2.54
TSC2-205ENST00000432909 CUL7Q14999 1698 aa30.84■■■□□ 2.53
TSC2-205ENST00000432909 DNAJC5Q9H3Z4 198 aa30.83■■■□□ 2.53
TSC2-205ENST00000432909 GRIN2AQ12879 1464 aa30.81■■■□□ 2.52
TSC2-205ENST00000432909 CARMIL1Q5VZK9 1371 aa30.77■■■□□ 2.52
TSC2-205ENST00000432909 EEA1Q15075 1411 aa30.72■■■□□ 2.51
TSC2-205ENST00000432909 NUP160Q12769 1436 aa30.66■■■□□ 2.5
TSC2-205ENST00000432909 CSRNP3Q8WYN3 585 aa30.66■■■□□ 2.5
TSC2-205ENST00000432909 CLASP1Q7Z460 1538 aa30.66■■■□□ 2.5
TSC2-205ENST00000432909 CEP170Q5SW79 1584 aa30.66■■■□□ 2.5
TSC2-205ENST00000432909 RAPGEF2Q9Y4G8 1499 aa30.62■■■□□ 2.49
TSC2-205ENST00000432909 PRXQ9BXM0 1461 aa30.61■■■□□ 2.49
TSC2-205ENST00000432909 FAM9AQ8IZU1 332 aaPredicted RBP30.59■■■□□ 2.49
TSC2-205ENST00000432909 KIAA0586Q9BVV6 1533 aa30.45■■■□□ 2.47
TSC2-205ENST00000432909 SHROOM2Q13796 1616 aa30.43■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms