RNA–Protein interactions for RNA: ENST00000431787.5

CARF-210, Transcript of calcium responsive transcription factor, humanhuman

TSL 4

Gene CARF, Length 594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARF-210ENST00000431787 NISCHQ9Y2I1 1504 aa23.22■■□□□ 1.31
CARF-210ENST00000431787 AEBP2Q6ZN18 517 aaPredicted RBP21.94■■□□□ 1.1
CARF-210ENST00000431787 CHIC1Q5VXU3 224 aa20.69■□□□□ 0.9
CARF-210ENST00000431787 CCDC180Q9P1Z9 1646 aa20.56■□□□□ 0.88
CARF-210ENST00000431787 ABCC9O60706 1549 aa20■□□□□ 0.79
CARF-210ENST00000431787 ZCCHC6Q5VYS8 1495 aaKnown RBP19.37■□□□□ 0.69
CARF-210ENST00000431787 DCAF8L2P0C7V8 631 aa19.32■□□□□ 0.68
CARF-210ENST00000431787 NACADO15069 1562 aa19.32■□□□□ 0.68
CARF-210ENST00000431787 RB1CC1Q8TDY2 1594 aa19.3■□□□□ 0.68
CARF-210ENST00000431787 MYO15BQ96JP2 1530 aa19.27■□□□□ 0.68
CARF-210ENST00000431787 DCAF1Q9Y4B6 1507 aa19.23■□□□□ 0.67
CARF-210ENST00000431787 SENP3Q9H4L4 574 aaPredicted RBP18.95■□□□□ 0.62
CARF-210ENST00000431787 UNC13AQ9UPW8 1703 aa18.83■□□□□ 0.61
CARF-210ENST00000431787 SCRIBQ14160 1630 aa18.76■□□□□ 0.59
CARF-210ENST00000431787 BICRAQ9NZM4 1560 aa18.72■□□□□ 0.59
CARF-210ENST00000431787 PABPN1Q86U42 306 aaKnown RBP eCLIP18.72■□□□□ 0.59
CARF-210ENST00000431787 PHF23Q9BUL5 403 aaPredicted RBP18.59■□□□□ 0.57
CARF-210ENST00000431787 SHROOM4Q9ULL8 1493 aa18.54■□□□□ 0.56
CARF-210ENST00000431787 DNAJC5BQ9UF47 199 aa18.27■□□□□ 0.52
CARF-210ENST00000431787 EIF4G1Q04637 1599 aaKnown RBP18.21■□□□□ 0.51
CARF-210ENST00000431787 CC2D2AQ9P2K1 1620 aa18.09■□□□□ 0.49
CARF-210ENST00000431787 CECR2Q9BXF3 1484 aa18.07■□□□□ 0.48
CARF-210ENST00000431787 BAZ1AQ9NRL2 1556 aaPredicted RBP17.98■□□□□ 0.47
CARF-210ENST00000431787 SMARCA4P51532 1647 aa17.98■□□□□ 0.47
CARF-210ENST00000431787 MROH2BQ7Z745 1585 aa17.9■□□□□ 0.46
CARF-210ENST00000431787 ATAD2BQ9ULI0 1458 aa17.86■□□□□ 0.45
CARF-210ENST00000431787 NCAPD3P42695 1498 aa17.84■□□□□ 0.45
CARF-210ENST00000431787 SMARCA2P51531 1590 aa17.83■□□□□ 0.45
CARF-210ENST00000431787 PEG3Q9GZU2 1588 aa17.82■□□□□ 0.44
CARF-210ENST00000431787 RSF1Q96T23 1441 aaPredicted RBP17.75■□□□□ 0.43
CARF-210ENST00000431787 HMGXB3Q12766 1538 aa17.75■□□□□ 0.43
CARF-210ENST00000431787 BAZ1BQ9UIG0 1483 aaKnown RBP17.7■□□□□ 0.42
CARF-210ENST00000431787 WIZO95785 1651 aa17.69■□□□□ 0.42
CARF-210ENST00000431787 FOXD1Q16676 465 aa17.62■□□□□ 0.41
CARF-210ENST00000431787 TOP2AP11388 1531 aaKnown RBP17.52■□□□□ 0.4
CARF-210ENST00000431787 SUPT5HO00267 1087 aaKnown RBP17.38■□□□□ 0.37
CARF-210ENST00000431787 NESP48681 1621 aa17.35■□□□□ 0.37
CARF-210ENST00000431787 LAMC3Q9Y6N6 1575 aa17.33■□□□□ 0.37
CARF-210ENST00000431787 CCDC88BA6NC98 1476 aa17.33■□□□□ 0.37
CARF-210ENST00000431787 CADPSQ9ULU8 1353 aa17.32■□□□□ 0.36
CARF-210ENST00000431787 CFTRP13569 1480 aa17.24■□□□□ 0.35
CARF-210ENST00000431787 ERCC6Q03468 1493 aa17.22■□□□□ 0.35
CARF-210ENST00000431787 PDS5BQ9NTI5 1447 aa17.21■□□□□ 0.35
CARF-210ENST00000431787 KIF21AQ7Z4S6 1674 aa17.12■□□□□ 0.33
CARF-210ENST00000431787 FANCD2Q9BXW9 1451 aa17.12■□□□□ 0.33
CARF-210ENST00000431787 PRDM2Q13029 1718 aa17.07■□□□□ 0.32
CARF-210ENST00000431787 CEP164Q9UPV0 1460 aa17.07■□□□□ 0.32
CARF-210ENST00000431787 THOC2Q8NI27 1593 aaKnown RBP17.05■□□□□ 0.32
CARF-210ENST00000431787 MRC2Q9UBG0 1479 aa17.02■□□□□ 0.32
CARF-210ENST00000431787 POTEDQ86YR6 584 aa17.02■□□□□ 0.32
CARF-210ENST00000431787 CUX2O14529 1486 aa17.01■□□□□ 0.31
CARF-210ENST00000431787 WDR62O43379 1518 aa16.96■□□□□ 0.31
CARF-210ENST00000431787 URB2Q14146 1524 aaKnown RBP16.94■□□□□ 0.3
CARF-210ENST00000431787 ABCC8Q09428 1581 aa16.86■□□□□ 0.29
CARF-210ENST00000431787 TOPBP1Q92547 1522 aa16.86■□□□□ 0.29
CARF-210ENST00000431787 DNMBPQ6XZF7 1577 aa16.84■□□□□ 0.29
CARF-210ENST00000431787 MSH5O43196 834 aa16.78■□□□□ 0.28
CARF-210ENST00000431787 CUX1P39880 1505 aa16.77■□□□□ 0.28
CARF-210ENST00000431787 WRNQ14191 1432 aaPredicted RBP eCLIP16.72■□□□□ 0.27
CARF-210ENST00000431787 POLA1P09884 1462 aaPredicted RBP16.72■□□□□ 0.27
CARF-210ENST00000431787 IFT140Q96RY7 1462 aa16.72■□□□□ 0.27
CARF-210ENST00000431787 FGD5Q6ZNL6 1462 aa16.69■□□□□ 0.26
CARF-210ENST00000431787 SOGA1O94964 1423 aa16.67■□□□□ 0.26
CARF-210ENST00000431787 TOP2BQ02880 1626 aa16.67■□□□□ 0.26
CARF-210ENST00000431787 SYNJ1O43426 1573 aa16.66■□□□□ 0.26
CARF-210ENST00000431787 TARBP1Q13395 1621 aaKnown RBP16.66■□□□□ 0.26
CARF-210ENST00000431787 BIVM-ERCC5R4GMW8 1640 aa16.66■□□□□ 0.26
CARF-210ENST00000431787 RAD54L2Q9Y4B4 1467 aa16.65■□□□□ 0.26
CARF-210ENST00000431787 ZNF608Q9ULD9 1512 aaPredicted RBP16.63■□□□□ 0.25
CARF-210ENST00000431787 EIF4G3O43432 1585 aaKnown RBP16.55■□□□□ 0.24
CARF-210ENST00000431787 AQRO60306 1485 aaKnown RBP eCLIP16.55■□□□□ 0.24
CARF-210ENST00000431787 TDRD9Q8NDG6 1382 aaKnown RBP16.55■□□□□ 0.24
CARF-210ENST00000431787 ABCA10Q8WWZ4 1543 aa16.55■□□□□ 0.24
CARF-210ENST00000431787 WDR97A6NE52 1622 aa16.54■□□□□ 0.24
CARF-210ENST00000431787 ABCA5Q8WWZ7 1642 aa16.46■□□□□ 0.23
CARF-210ENST00000431787 GAPVD1Q14C86 1478 aa16.46■□□□□ 0.23
CARF-210ENST00000431787 GRIN2BQ13224 1484 aa16.45■□□□□ 0.22
CARF-210ENST00000431787 PIAS4Q8N2W9 510 aaPredicted RBP16.41■□□□□ 0.22
CARF-210ENST00000431787 TRIM41Q8WV44 630 aa16.41■□□□□ 0.22
CARF-210ENST00000431787 SNAPC4Q5SXM2 1469 aa16.4■□□□□ 0.22
CARF-210ENST00000431787 MAGI1Q96QZ7 1491 aaPredicted RBP16.39■□□□□ 0.21
CARF-210ENST00000431787 PBRM1Q86U86 1689 aa16.39■□□□□ 0.21
CARF-210ENST00000431787 KIF27Q86VH2 1401 aa16.36■□□□□ 0.21
CARF-210ENST00000431787 ERICH3Q5RHP9 1530 aa16.35■□□□□ 0.21
CARF-210ENST00000431787 DNAJC5Q9H3Z4 198 aa16.35■□□□□ 0.21
CARF-210ENST00000431787 OSCARQ8IYS5 282 aa16.34■□□□□ 0.21
CARF-210ENST00000431787 SYNJ2O15056 1496 aa16.32■□□□□ 0.2
CARF-210ENST00000431787 FBLN2P98095 1184 aa16.31■□□□□ 0.2
CARF-210ENST00000431787 IGF1RP08069 1367 aa16.3■□□□□ 0.2
CARF-210ENST00000431787 CHMP7Q8WUX9 453 aaPredicted RBP16.3■□□□□ 0.2
CARF-210ENST00000431787 CHD1O14646 1710 aa16.3■□□□□ 0.2
CARF-210ENST00000431787 ADAMTS12P58397 1594 aa16.29■□□□□ 0.2
CARF-210ENST00000431787 FHAD1B1AJZ9 1412 aa16.28■□□□□ 0.2
CARF-210ENST00000431787 RUSC2Q8N2Y8 1516 aa16.25■□□□□ 0.19
CARF-210ENST00000431787 PLPPR3Q6T4P5 718 aa16.25■□□□□ 0.19
CARF-210ENST00000431787 GRIN2AQ12879 1464 aa16.23■□□□□ 0.19
CARF-210ENST00000431787 CUL7Q14999 1698 aa16.21■□□□□ 0.18
CARF-210ENST00000431787 CARMIL1Q5VZK9 1371 aa16.19■□□□□ 0.18
CARF-210ENST00000431787 NUP160Q12769 1436 aa16.17■□□□□ 0.18
CARF-210ENST00000431787 CLASP1Q7Z460 1538 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms