RNA–Protein interactions for RNA: ENST00000430397.5

CLCN2-203, Transcript of chloride voltage-gated channel 2, humanhuman

TSL 1 (best)

Gene CLCN2, Length 1,844 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2-203ENST00000430397 NISCHQ9Y2I1 1504 aa40.5■■■■■ 4.07
CLCN2-203ENST00000430397 CCDC180Q9P1Z9 1646 aa35.54■■■■□ 3.28
CLCN2-203ENST00000430397 ABCC9O60706 1549 aa34.71■■■■□ 3.15
CLCN2-203ENST00000430397 ZCCHC6Q5VYS8 1495 aaKnown RBP33.9■■■■□ 3.02
CLCN2-203ENST00000430397 DCAF8L2P0C7V8 631 aa33.83■■■■□ 3.01
CLCN2-203ENST00000430397 DCAF1Q9Y4B6 1507 aa33.4■■■□□ 2.94
CLCN2-203ENST00000430397 RB1CC1Q8TDY2 1594 aa33.38■■■□□ 2.93
CLCN2-203ENST00000430397 NACADO15069 1562 aa33.36■■■□□ 2.93
CLCN2-203ENST00000430397 MYO15BQ96JP2 1530 aa33.19■■■□□ 2.9
CLCN2-203ENST00000430397 SHROOM4Q9ULL8 1493 aa32.85■■■□□ 2.85
CLCN2-203ENST00000430397 SCRIBQ14160 1630 aa32.71■■■□□ 2.83
CLCN2-203ENST00000430397 UNC13AQ9UPW8 1703 aa32.65■■■□□ 2.82
CLCN2-203ENST00000430397 PABPN1Q86U42 306 aaKnown RBP eCLIP32.49■■■□□ 2.79
CLCN2-203ENST00000430397 BICRAQ9NZM4 1560 aa32.4■■■□□ 2.78
CLCN2-203ENST00000430397 DNAJC5BQ9UF47 199 aa31.66■■■□□ 2.66
CLCN2-203ENST00000430397 CECR2Q9BXF3 1484 aa31.56■■■□□ 2.64
CLCN2-203ENST00000430397 EIF4G1Q04637 1599 aaKnown RBP31.52■■■□□ 2.64
CLCN2-203ENST00000430397 CC2D2AQ9P2K1 1620 aa31.35■■■□□ 2.61
CLCN2-203ENST00000430397 SUPT5HO00267 1087 aaKnown RBP31.33■■■□□ 2.61
CLCN2-203ENST00000430397 BAZ1AQ9NRL2 1556 aaPredicted RBP31.32■■■□□ 2.6
CLCN2-203ENST00000430397 MROH2BQ7Z745 1585 aa31.3■■■□□ 2.6
CLCN2-203ENST00000430397 SMARCA4P51532 1647 aa31.25■■■□□ 2.59
CLCN2-203ENST00000430397 RSF1Q96T23 1441 aaPredicted RBP31.23■■■□□ 2.59
CLCN2-203ENST00000430397 WIZO95785 1651 aa31.02■■■□□ 2.56
CLCN2-203ENST00000430397 ATAD2BQ9ULI0 1458 aa30.88■■■□□ 2.53
CLCN2-203ENST00000430397 SMARCA2P51531 1590 aa30.83■■■□□ 2.53
CLCN2-203ENST00000430397 PEG3Q9GZU2 1588 aa30.82■■■□□ 2.52
CLCN2-203ENST00000430397 NCAPD3P42695 1498 aa30.79■■■□□ 2.52
CLCN2-203ENST00000430397 BAZ1BQ9UIG0 1483 aaKnown RBP30.71■■■□□ 2.51
CLCN2-203ENST00000430397 HMGXB3Q12766 1538 aa30.67■■■□□ 2.5
CLCN2-203ENST00000430397 TOP2AP11388 1531 aaKnown RBP30.66■■■□□ 2.5
CLCN2-203ENST00000430397 CCDC88BA6NC98 1476 aa30.36■■■□□ 2.45
CLCN2-203ENST00000430397 NESP48681 1621 aa30.1■■■□□ 2.41
CLCN2-203ENST00000430397 LAMC3Q9Y6N6 1575 aa29.95■■■□□ 2.39
CLCN2-203ENST00000430397 CADPSQ9ULU8 1353 aa29.94■■■□□ 2.38
CLCN2-203ENST00000430397 ERCC6Q03468 1493 aa29.88■■■□□ 2.37
CLCN2-203ENST00000430397 CFTRP13569 1480 aa29.86■■■□□ 2.37
CLCN2-203ENST00000430397 PDS5BQ9NTI5 1447 aa29.75■■■□□ 2.35
CLCN2-203ENST00000430397 KIF21AQ7Z4S6 1674 aa29.72■■■□□ 2.35
CLCN2-203ENST00000430397 FANCD2Q9BXW9 1451 aa29.63■■■□□ 2.33
CLCN2-203ENST00000430397 PRDM2Q13029 1718 aa29.61■■■□□ 2.33
CLCN2-203ENST00000430397 CHIC1Q5VXU3 224 aa29.61■■■□□ 2.33
CLCN2-203ENST00000430397 ABCC8Q09428 1581 aa29.6■■■□□ 2.33
CLCN2-203ENST00000430397 CEP164Q9UPV0 1460 aa29.57■■■□□ 2.32
CLCN2-203ENST00000430397 THOC2Q8NI27 1593 aaKnown RBP29.54■■■□□ 2.32
CLCN2-203ENST00000430397 MRC2Q9UBG0 1479 aa29.47■■■□□ 2.31
CLCN2-203ENST00000430397 TRIM41Q8WV44 630 aa29.45■■■□□ 2.3
CLCN2-203ENST00000430397 WRNQ14191 1432 aaPredicted RBP eCLIP29.44■■■□□ 2.3
CLCN2-203ENST00000430397 CUX2O14529 1486 aa29.4■■■□□ 2.3
CLCN2-203ENST00000430397 WDR62O43379 1518 aa29.35■■■□□ 2.29
CLCN2-203ENST00000430397 SYNJ1O43426 1573 aa29.33■■■□□ 2.29
CLCN2-203ENST00000430397 URB2Q14146 1524 aaKnown RBP29.33■■■□□ 2.29
CLCN2-203ENST00000430397 CUX1P39880 1505 aa29.3■■■□□ 2.28
CLCN2-203ENST00000430397 TOP2BQ02880 1626 aa29.21■■■□□ 2.27
CLCN2-203ENST00000430397 DNMBPQ6XZF7 1577 aa29.19■■■□□ 2.26
CLCN2-203ENST00000430397 TOPBP1Q92547 1522 aa29.19■■■□□ 2.26
CLCN2-203ENST00000430397 BIVM-ERCC5R4GMW8 1640 aa29.17■■■□□ 2.26
CLCN2-203ENST00000430397 FGD5Q6ZNL6 1462 aa29.09■■■□□ 2.25
CLCN2-203ENST00000430397 POLA1P09884 1462 aaPredicted RBP29.01■■■□□ 2.23
CLCN2-203ENST00000430397 FAM9AQ8IZU1 332 aaPredicted RBP28.98■■■□□ 2.23
CLCN2-203ENST00000430397 RAD54L2Q9Y4B4 1467 aa28.95■■■□□ 2.23
CLCN2-203ENST00000430397 SOGA1O94964 1423 aa28.93■■■□□ 2.22
CLCN2-203ENST00000430397 IFT140Q96RY7 1462 aa28.91■■■□□ 2.22
CLCN2-203ENST00000430397 RUSC2Q8N2Y8 1516 aa28.85■■■□□ 2.21
CLCN2-203ENST00000430397 ZNF608Q9ULD9 1512 aaPredicted RBP28.83■■■□□ 2.21
CLCN2-203ENST00000430397 TARBP1Q13395 1621 aaKnown RBP28.82■■■□□ 2.2
CLCN2-203ENST00000430397 ABCA10Q8WWZ4 1543 aa28.77■■■□□ 2.2
CLCN2-203ENST00000430397 KIF27Q86VH2 1401 aa28.74■■■□□ 2.19
CLCN2-203ENST00000430397 TDRD9Q8NDG6 1382 aaKnown RBP28.74■■■□□ 2.19
CLCN2-203ENST00000430397 EIF4G3O43432 1585 aaKnown RBP28.71■■■□□ 2.19
CLCN2-203ENST00000430397 AQRO60306 1485 aaKnown RBP eCLIP28.69■■■□□ 2.182e-6■■■■□ 25.5
CLCN2-203ENST00000430397 WDR97A6NE52 1622 aa28.69■■■□□ 2.18
CLCN2-203ENST00000430397 EEA1Q15075 1411 aa28.68■■■□□ 2.18
CLCN2-203ENST00000430397 EHMT2Q96KQ7 1210 aa28.67■■■□□ 2.18
CLCN2-203ENST00000430397 CSRNP3Q8WYN3 585 aa28.64■■■□□ 2.18
CLCN2-203ENST00000430397 GAPVD1Q14C86 1478 aa28.59■■■□□ 2.17
CLCN2-203ENST00000430397 ABCA5Q8WWZ7 1642 aa28.57■■■□□ 2.16
CLCN2-203ENST00000430397 IGF1RP08069 1367 aa28.52■■■□□ 2.16
CLCN2-203ENST00000430397 LOC105371045A0A1W2PR82 267 aa28.51■■■□□ 2.15
CLCN2-203ENST00000430397 GRIN2BQ13224 1484 aa28.44■■■□□ 2.14
CLCN2-203ENST00000430397 PBRM1Q86U86 1689 aa28.44■■■□□ 2.14
CLCN2-203ENST00000430397 SNAPC4Q5SXM2 1469 aa28.43■■■□□ 2.14
CLCN2-203ENST00000430397 ERICH3Q5RHP9 1530 aa28.42■■■□□ 2.14
CLCN2-203ENST00000430397 CARMIL1Q5VZK9 1371 aa28.4■■■□□ 2.14
CLCN2-203ENST00000430397 PRXQ9BXM0 1461 aa28.37■■■□□ 2.13
CLCN2-203ENST00000430397 RAPGEF2Q9Y4G8 1499 aa28.35■■■□□ 2.13
CLCN2-203ENST00000430397 FBLN2P98095 1184 aa28.34■■■□□ 2.13
CLCN2-203ENST00000430397 KIF21BO75037 1637 aa28.33■■■□□ 2.13
CLCN2-203ENST00000430397 MAGI1Q96QZ7 1491 aaPredicted RBP28.33■■■□□ 2.13
CLCN2-203ENST00000430397 CUL7Q14999 1698 aa28.32■■■□□ 2.12
CLCN2-203ENST00000430397 GOLGA3Q08378 1498 aa28.32■■■□□ 2.12
CLCN2-203ENST00000430397 UBTFP17480 764 aaKnown RBP28.31■■■□□ 2.12
CLCN2-203ENST00000430397 CHD1O14646 1710 aa28.3■■■□□ 2.12
CLCN2-203ENST00000430397 DNAJC5Q9H3Z4 198 aa28.27■■■□□ 2.12
CLCN2-203ENST00000430397 ADAMTS12P58397 1594 aa28.27■■■□□ 2.12
CLCN2-203ENST00000430397 FHAD1B1AJZ9 1412 aa28.26■■■□□ 2.11
CLCN2-203ENST00000430397 OSCARQ8IYS5 282 aa28.25■■■□□ 2.11
CLCN2-203ENST00000430397 CHMP7Q8WUX9 453 aaPredicted RBP28.24■■■□□ 2.11
CLCN2-203ENST00000430397 SYNJ2O15056 1496 aa28.23■■■□□ 2.11
CLCN2-203ENST00000430397 RANGAP1P46060 587 aaPredicted RBP28.12■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms