RNA–Protein interactions for RNA: ENST00000430192.5

LINC00299-201, long intergenic non-protein coding RNA 299, humanhuman

TSL 1 (best) BASIC

Gene LINC00299, Length 1,760 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00299-201ENST00000430192 NISCHQ9Y2I1 1504 aa17.94■□□□□ 0.46
LINC00299-201ENST00000430192 CCDC180Q9P1Z9 1646 aa15.78■□□□□ 0.12
LINC00299-201ENST00000430192 ABCC9O60706 1549 aa15.08■□□□□ 0
LINC00299-201ENST00000430192 ZCCHC6Q5VYS8 1495 aaKnown RBP15.03■□□□□ -0
LINC00299-201ENST00000430192 DCAF1Q9Y4B6 1507 aa14.89□□□□□ -0.03
LINC00299-201ENST00000430192 DCAF8L2P0C7V8 631 aa14.85□□□□□ -0.03
LINC00299-201ENST00000430192 MYO15BQ96JP2 1530 aa14.83□□□□□ -0.04
LINC00299-201ENST00000430192 NACADO15069 1562 aa14.78□□□□□ -0.04
LINC00299-201ENST00000430192 RB1CC1Q8TDY2 1594 aa14.69□□□□□ -0.06
LINC00299-201ENST00000430192 SCRIBQ14160 1630 aa14.41□□□□□ -0.1
LINC00299-201ENST00000430192 SHROOM4Q9ULL8 1493 aa14.38□□□□□ -0.11
LINC00299-201ENST00000430192 UNC13AQ9UPW8 1703 aa14.24□□□□□ -0.13
LINC00299-201ENST00000430192 BICRAQ9NZM4 1560 aa14.18□□□□□ -0.14
LINC00299-201ENST00000430192 PABPN1Q86U42 306 aaKnown RBP eCLIP14.15□□□□□ -0.14
LINC00299-201ENST00000430192 CECR2Q9BXF3 1484 aa13.9□□□□□ -0.18
LINC00299-201ENST00000430192 BAZ1AQ9NRL2 1556 aaPredicted RBP13.9□□□□□ -0.18
LINC00299-201ENST00000430192 SMARCA4P51532 1647 aa13.83□□□□□ -0.2
LINC00299-201ENST00000430192 RSF1Q96T23 1441 aaPredicted RBP13.81□□□□□ -0.2
LINC00299-201ENST00000430192 EIF4G1Q04637 1599 aaKnown RBP13.81□□□□□ -0.2
LINC00299-201ENST00000430192 MROH2BQ7Z745 1585 aa13.81□□□□□ -0.2
LINC00299-201ENST00000430192 SUPT5HO00267 1087 aaKnown RBP13.74□□□□□ -0.21
LINC00299-201ENST00000430192 PEG3Q9GZU2 1588 aa13.71□□□□□ -0.22
LINC00299-201ENST00000430192 SMARCA2P51531 1590 aa13.7□□□□□ -0.22
LINC00299-201ENST00000430192 ATAD2BQ9ULI0 1458 aa13.68□□□□□ -0.22
LINC00299-201ENST00000430192 WIZO95785 1651 aa13.65□□□□□ -0.22
LINC00299-201ENST00000430192 CC2D2AQ9P2K1 1620 aa13.64□□□□□ -0.23
LINC00299-201ENST00000430192 NCAPD3P42695 1498 aa13.63□□□□□ -0.23
LINC00299-201ENST00000430192 BAZ1BQ9UIG0 1483 aaKnown RBP13.6□□□□□ -0.23
LINC00299-201ENST00000430192 HMGXB3Q12766 1538 aa13.6□□□□□ -0.23
LINC00299-201ENST00000430192 TOP2AP11388 1531 aaKnown RBP13.58□□□□□ -0.23
LINC00299-201ENST00000430192 DNAJC5BQ9UF47 199 aa13.46□□□□□ -0.25
LINC00299-201ENST00000430192 CCDC88BA6NC98 1476 aa13.41□□□□□ -0.26
LINC00299-201ENST00000430192 AEBP2Q6ZN18 517 aaPredicted RBP13.31□□□□□ -0.28
LINC00299-201ENST00000430192 CADPSQ9ULU8 1353 aa13.25□□□□□ -0.29
LINC00299-201ENST00000430192 CFTRP13569 1480 aa13.25□□□□□ -0.29
LINC00299-201ENST00000430192 LAMC3Q9Y6N6 1575 aa13.21□□□□□ -0.3
LINC00299-201ENST00000430192 PDS5BQ9NTI5 1447 aa13.14□□□□□ -0.31
LINC00299-201ENST00000430192 NESP48681 1621 aa13.13□□□□□ -0.31
LINC00299-201ENST00000430192 PRDM2Q13029 1718 aa13.1□□□□□ -0.31
LINC00299-201ENST00000430192 FANCD2Q9BXW9 1451 aa13.1□□□□□ -0.31
LINC00299-201ENST00000430192 CEP164Q9UPV0 1460 aa13.05□□□□□ -0.32
LINC00299-201ENST00000430192 CHIC1Q5VXU3 224 aa13.04□□□□□ -0.32
LINC00299-201ENST00000430192 WRNQ14191 1432 aaPredicted RBP eCLIP13.03□□□□□ -0.32
LINC00299-201ENST00000430192 ERCC6Q03468 1493 aa13.01□□□□□ -0.33
LINC00299-201ENST00000430192 ABCC8Q09428 1581 aa13□□□□□ -0.33
LINC00299-201ENST00000430192 TRIM41Q8WV44 630 aa12.99□□□□□ -0.33
LINC00299-201ENST00000430192 KIF21AQ7Z4S6 1674 aa12.96□□□□□ -0.33
LINC00299-201ENST00000430192 MRC2Q9UBG0 1479 aa12.95□□□□□ -0.34
LINC00299-201ENST00000430192 CUX1P39880 1505 aa12.94□□□□□ -0.34
LINC00299-201ENST00000430192 DNMBPQ6XZF7 1577 aa12.94□□□□□ -0.34
LINC00299-201ENST00000430192 TOP2BQ02880 1626 aa12.93□□□□□ -0.34
LINC00299-201ENST00000430192 SYNJ1O43426 1573 aa12.93□□□□□ -0.34
LINC00299-201ENST00000430192 BIVM-ERCC5R4GMW8 1640 aa12.92□□□□□ -0.34
LINC00299-201ENST00000430192 URB2Q14146 1524 aaKnown RBP12.91□□□□□ -0.34
LINC00299-201ENST00000430192 TOPBP1Q92547 1522 aa12.91□□□□□ -0.34
LINC00299-201ENST00000430192 WDR62O43379 1518 aa12.88□□□□□ -0.35
LINC00299-201ENST00000430192 THOC2Q8NI27 1593 aaKnown RBP12.86□□□□□ -0.35
LINC00299-201ENST00000430192 FGD5Q6ZNL6 1462 aa12.85□□□□□ -0.35
LINC00299-201ENST00000430192 POLA1P09884 1462 aaPredicted RBP12.83□□□□□ -0.35
LINC00299-201ENST00000430192 SOGA1O94964 1423 aa12.8□□□□□ -0.36
LINC00299-201ENST00000430192 EEA1Q15075 1411 aa12.78□□□□□ -0.36
LINC00299-201ENST00000430192 IFT140Q96RY7 1462 aa12.77□□□□□ -0.36
LINC00299-201ENST00000430192 ABCA10Q8WWZ4 1543 aa12.76□□□□□ -0.37
LINC00299-201ENST00000430192 CUX2O14529 1486 aa12.75□□□□□ -0.37
LINC00299-201ENST00000430192 KIF27Q86VH2 1401 aa12.75□□□□□ -0.37
LINC00299-201ENST00000430192 RAD54L2Q9Y4B4 1467 aa12.75□□□□□ -0.37
LINC00299-201ENST00000430192 TARBP1Q13395 1621 aaKnown RBP12.72□□□□□ -0.37
LINC00299-201ENST00000430192 WDR97A6NE52 1622 aa12.7□□□□□ -0.38
LINC00299-201ENST00000430192 FAM9AQ8IZU1 332 aaPredicted RBP12.67□□□□□ -0.38
LINC00299-201ENST00000430192 CSRNP3Q8WYN3 585 aa12.66□□□□□ -0.38
LINC00299-201ENST00000430192 TDRD9Q8NDG6 1382 aaKnown RBP12.66□□□□□ -0.38
LINC00299-201ENST00000430192 GAPVD1Q14C86 1478 aa12.66□□□□□ -0.38
LINC00299-201ENST00000430192 RUSC2Q8N2Y8 1516 aa12.66□□□□□ -0.38
LINC00299-201ENST00000430192 ABCA5Q8WWZ7 1642 aa12.65□□□□□ -0.38
LINC00299-201ENST00000430192 ZNF608Q9ULD9 1512 aaPredicted RBP12.64□□□□□ -0.39
LINC00299-201ENST00000430192 ERICH3Q5RHP9 1530 aa12.62□□□□□ -0.39
LINC00299-201ENST00000430192 IGF1RP08069 1367 aa12.62□□□□□ -0.39
LINC00299-201ENST00000430192 AQRO60306 1485 aaKnown RBP eCLIP12.62□□□□□ -0.39
LINC00299-201ENST00000430192 GRIN2BQ13224 1484 aa12.62□□□□□ -0.39
LINC00299-201ENST00000430192 EIF4G3O43432 1585 aaKnown RBP12.61□□□□□ -0.39
LINC00299-201ENST00000430192 PRXQ9BXM0 1461 aa12.57□□□□□ -0.4
LINC00299-201ENST00000430192 CARMIL1Q5VZK9 1371 aa12.57□□□□□ -0.4
LINC00299-201ENST00000430192 CUL7Q14999 1698 aa12.56□□□□□ -0.4
LINC00299-201ENST00000430192 KIF21BO75037 1637 aa12.56□□□□□ -0.4
LINC00299-201ENST00000430192 MAGI1Q96QZ7 1491 aaPredicted RBP12.55□□□□□ -0.4
LINC00299-201ENST00000430192 PBRM1Q86U86 1689 aa12.54□□□□□ -0.4
LINC00299-201ENST00000430192 GOLGA3Q08378 1498 aa12.54□□□□□ -0.4
LINC00299-201ENST00000430192 FHAD1B1AJZ9 1412 aa12.54□□□□□ -0.4
LINC00299-201ENST00000430192 RAPGEF2Q9Y4G8 1499 aa12.54□□□□□ -0.4
LINC00299-201ENST00000430192 SNAPC4Q5SXM2 1469 aa12.52□□□□□ -0.4
LINC00299-201ENST00000430192 ADAMTS12P58397 1594 aa12.51□□□□□ -0.41
LINC00299-201ENST00000430192 SYNJ2O15056 1496 aa12.49□□□□□ -0.41
LINC00299-201ENST00000430192 LOC105371045A0A1W2PR82 267 aa12.48□□□□□ -0.41
LINC00299-201ENST00000430192 UBTFP17480 764 aaKnown RBP12.47□□□□□ -0.41
LINC00299-201ENST00000430192 CHMP7Q8WUX9 453 aaPredicted RBP12.47□□□□□ -0.41
LINC00299-201ENST00000430192 EHMT2Q96KQ7 1210 aa12.46□□□□□ -0.42
LINC00299-201ENST00000430192 TNIKQ9UKE5 1360 aa12.46□□□□□ -0.42
LINC00299-201ENST00000430192 GRIN2AQ12879 1464 aa12.44□□□□□ -0.42
LINC00299-201ENST00000430192 FBLN2P98095 1184 aa12.43□□□□□ -0.42
LINC00299-201ENST00000430192 NUP160Q12769 1436 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms