RNA–Protein interactions for RNA: ENST00000429355.6

R3HDM2-206, Transcript of R3H domain containing 2, humanhuman

TSL 5

Gene R3HDM2, Length 2,266 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2-206ENST00000429355 NISCHQ9Y2I1 1504 aa32.2■■■□□ 2.75
R3HDM2-206ENST00000429355 CCDC180Q9P1Z9 1646 aa28.2■■■□□ 2.11
R3HDM2-206ENST00000429355 ABCC9O60706 1549 aa26.98■■□□□ 1.91
R3HDM2-206ENST00000429355 ZCCHC6Q5VYS8 1495 aaKnown RBP26.98■■□□□ 1.91
R3HDM2-206ENST00000429355 DCAF8L2P0C7V8 631 aa26.7■■□□□ 1.86
R3HDM2-206ENST00000429355 DCAF1Q9Y4B6 1507 aa26.65■■□□□ 1.86
R3HDM2-206ENST00000429355 MYO15BQ96JP2 1530 aa26.47■■□□□ 1.83
R3HDM2-206ENST00000429355 NACADO15069 1562 aa26.38■■□□□ 1.81
R3HDM2-206ENST00000429355 RB1CC1Q8TDY2 1594 aa26.22■■□□□ 1.79
R3HDM2-206ENST00000429355 SHROOM4Q9ULL8 1493 aa26■■□□□ 1.75
R3HDM2-206ENST00000429355 SCRIBQ14160 1630 aa25.87■■□□□ 1.73
R3HDM2-206ENST00000429355 UNC13AQ9UPW8 1703 aa25.61■■□□□ 1.69
R3HDM2-206ENST00000429355 BICRAQ9NZM4 1560 aa25.43■■□□□ 1.66
R3HDM2-206ENST00000429355 PABPN1Q86U42 306 aaKnown RBP eCLIP25.4■■□□□ 1.66
R3HDM2-206ENST00000429355 CECR2Q9BXF3 1484 aa25.05■■□□□ 1.6
R3HDM2-206ENST00000429355 BAZ1AQ9NRL2 1556 aaPredicted RBP24.88■■□□□ 1.57
R3HDM2-206ENST00000429355 SUPT5HO00267 1087 aaKnown RBP24.87■■□□□ 1.57
R3HDM2-206ENST00000429355 RSF1Q96T23 1441 aaPredicted RBP24.87■■□□□ 1.57
R3HDM2-206ENST00000429355 MROH2BQ7Z745 1585 aa24.86■■□□□ 1.57
R3HDM2-206ENST00000429355 SMARCA4P51532 1647 aa24.8■■□□□ 1.56
R3HDM2-206ENST00000429355 EIF4G1Q04637 1599 aaKnown RBP24.69■■□□□ 1.54
R3HDM2-206ENST00000429355 WIZO95785 1651 aa24.6■■□□□ 1.53
R3HDM2-206ENST00000429355 PEG3Q9GZU2 1588 aa24.54■■□□□ 1.52
R3HDM2-206ENST00000429355 HRCP23327 699 aa24.54■■□□□ 1.52
R3HDM2-206ENST00000429355 ATAD2BQ9ULI0 1458 aa24.51■■□□□ 1.51
R3HDM2-206ENST00000429355 SMARCA2P51531 1590 aa24.48■■□□□ 1.51
R3HDM2-206ENST00000429355 CC2D2AQ9P2K1 1620 aa24.4■■□□□ 1.5
R3HDM2-206ENST00000429355 NCAPD3P42695 1498 aa24.38■■□□□ 1.49
R3HDM2-206ENST00000429355 TOP2AP11388 1531 aaKnown RBP24.37■■□□□ 1.49
R3HDM2-206ENST00000429355 BAZ1BQ9UIG0 1483 aaKnown RBP24.34■■□□□ 1.49
R3HDM2-206ENST00000429355 HMGXB3Q12766 1538 aa24.28■■□□□ 1.48
R3HDM2-206ENST00000429355 DNAJC5BQ9UF47 199 aa24.13■■□□□ 1.45
R3HDM2-206ENST00000429355 CCDC88BA6NC98 1476 aa24.13■■□□□ 1.45
R3HDM2-206ENST00000429355 PCGF6Q9BYE7 350 aa23.93■■□□□ 1.42
R3HDM2-206ENST00000429355 CHIC1Q5VXU3 224 aa23.91■■□□□ 1.42
R3HDM2-206ENST00000429355 PPARGC1BQ86YN6 1023 aaKnown RBP23.82■■□□□ 1.4
R3HDM2-206ENST00000429355 CFTRP13569 1480 aa23.73■■□□□ 1.39
R3HDM2-206ENST00000429355 CADPSQ9ULU8 1353 aa23.72■■□□□ 1.39
R3HDM2-206ENST00000429355 PELP1Q8IZL8 1130 aaKnown RBP23.67■■□□□ 1.38
R3HDM2-206ENST00000429355 NESP48681 1621 aa23.58■■□□□ 1.37
R3HDM2-206ENST00000429355 LAMC3Q9Y6N6 1575 aa23.57■■□□□ 1.36
R3HDM2-206ENST00000429355 PRDM2Q13029 1718 aa23.5■■□□□ 1.35
R3HDM2-206ENST00000429355 ABCC8Q09428 1581 aa23.48■■□□□ 1.35
R3HDM2-206ENST00000429355 FANCD2Q9BXW9 1451 aa23.44■■□□□ 1.34
R3HDM2-206ENST00000429355 TRIM41Q8WV44 630 aa23.43■■□□□ 1.34
R3HDM2-206ENST00000429355 PDS5BQ9NTI5 1447 aa23.42■■□□□ 1.34
R3HDM2-206ENST00000429355 WRNQ14191 1432 aaPredicted RBP eCLIP23.41■■□□□ 1.34
R3HDM2-206ENST00000429355 TRIM26Q12899 539 aaPredicted RBP23.34■■□□□ 1.33
R3HDM2-206ENST00000429355 CEP164Q9UPV0 1460 aa23.32■■□□□ 1.32
R3HDM2-206ENST00000429355 SYNJ1O43426 1573 aa23.29■■□□□ 1.32
R3HDM2-206ENST00000429355 CUX1P39880 1505 aa23.26■■□□□ 1.31
R3HDM2-206ENST00000429355 KIF21AQ7Z4S6 1674 aa23.25■■□□□ 1.31
R3HDM2-206ENST00000429355 TOP2BQ02880 1626 aa23.24■■□□□ 1.31
R3HDM2-206ENST00000429355 ZEB1P37275 1124 aaPredicted RBP23.22■■□□□ 1.31
R3HDM2-206ENST00000429355 BIVM-ERCC5R4GMW8 1640 aa23.2■■□□□ 1.31
R3HDM2-206ENST00000429355 LOC105371045A0A1W2PR82 267 aa23.19■■□□□ 1.3
R3HDM2-206ENST00000429355 ERCC6Q03468 1493 aa23.17■■□□□ 1.3
R3HDM2-206ENST00000429355 URB2Q14146 1524 aaKnown RBP23.16■■□□□ 1.3
R3HDM2-206ENST00000429355 DNMBPQ6XZF7 1577 aa23.15■■□□□ 1.3
R3HDM2-206ENST00000429355 TOPBP1Q92547 1522 aa23.14■■□□□ 1.3
R3HDM2-206ENST00000429355 MRC2Q9UBG0 1479 aa23.12■■□□□ 1.29
R3HDM2-206ENST00000429355 SCAF1Q9H7N4 1312 aaKnown RBP23.08■■□□□ 1.29
R3HDM2-206ENST00000429355 FGD5Q6ZNL6 1462 aa23.06■■□□□ 1.28
R3HDM2-206ENST00000429355 WDR62O43379 1518 aa23.01■■□□□ 1.27
R3HDM2-206ENST00000429355 POLA1P09884 1462 aaPredicted RBP23.01■■□□□ 1.27
R3HDM2-206ENST00000429355 SOGA1O94964 1423 aa23.01■■□□□ 1.27
R3HDM2-206ENST00000429355 THOC2Q8NI27 1593 aaKnown RBP22.99■■□□□ 1.27
R3HDM2-206ENST00000429355 FAM9AQ8IZU1 332 aaPredicted RBP22.97■■□□□ 1.27
R3HDM2-206ENST00000429355 RUSC2Q8N2Y8 1516 aa22.93■■□□□ 1.26
R3HDM2-206ENST00000429355 RAD54L2Q9Y4B4 1467 aa22.92■■□□□ 1.26
R3HDM2-206ENST00000429355 EEA1Q15075 1411 aa22.9■■□□□ 1.26
R3HDM2-206ENST00000429355 CUX2O14529 1486 aa22.87■■□□□ 1.25
R3HDM2-206ENST00000429355 ABCA10Q8WWZ4 1543 aa22.86■■□□□ 1.25
R3HDM2-206ENST00000429355 KIF27Q86VH2 1401 aa22.86■■□□□ 1.25
R3HDM2-206ENST00000429355 CSRNP3Q8WYN3 585 aa22.83■■□□□ 1.24
R3HDM2-206ENST00000429355 TARBP1Q13395 1621 aaKnown RBP22.82■■□□□ 1.24
R3HDM2-206ENST00000429355 IFT140Q96RY7 1462 aa22.79■■□□□ 1.24
R3HDM2-206ENST00000429355 MYT1Q01538 1121 aa22.78■■□□□ 1.24
R3HDM2-206ENST00000429355 WDR97A6NE52 1622 aa22.77■■□□□ 1.24
R3HDM2-206ENST00000429355 TDRD9Q8NDG6 1382 aaKnown RBP22.75■■□□□ 1.23
R3HDM2-206ENST00000429355 IGF1RP08069 1367 aa22.7■■□□□ 1.22
R3HDM2-206ENST00000429355 GAPVD1Q14C86 1478 aa22.68■■□□□ 1.22
R3HDM2-206ENST00000429355 ABCA5Q8WWZ7 1642 aa22.68■■□□□ 1.22
R3HDM2-206ENST00000429355 ZNF608Q9ULD9 1512 aaPredicted RBP22.66■■□□□ 1.22
R3HDM2-206ENST00000429355 AQRO60306 1485 aaKnown RBP eCLIP22.65■■□□□ 1.221e-6■■■■□ 19.6
R3HDM2-206ENST00000429355 EHMT2Q96KQ7 1210 aa22.63■■□□□ 1.21
R3HDM2-206ENST00000429355 PRXQ9BXM0 1461 aa22.61■■□□□ 1.21
R3HDM2-206ENST00000429355 ACIN1Q9UKV3 1341 aaKnown RBP22.61■■□□□ 1.21
R3HDM2-206ENST00000429355 ERICH3Q5RHP9 1530 aa22.59■■□□□ 1.21
R3HDM2-206ENST00000429355 KIF21BO75037 1637 aa22.59■■□□□ 1.21
R3HDM2-206ENST00000429355 CARMIL1Q5VZK9 1371 aa22.57■■□□□ 1.2
R3HDM2-206ENST00000429355 EIF4G3O43432 1585 aaKnown RBP22.56■■□□□ 1.2
R3HDM2-206ENST00000429355 GRIN2BQ13224 1484 aa22.56■■□□□ 1.2
R3HDM2-206ENST00000429355 GOLGA3Q08378 1498 aa22.55■■□□□ 1.2
R3HDM2-206ENST00000429355 RAPGEF2Q9Y4G8 1499 aa22.55■■□□□ 1.2
R3HDM2-206ENST00000429355 PBRM1Q86U86 1689 aa22.51■■□□□ 1.19
R3HDM2-206ENST00000429355 CUL7Q14999 1698 aa22.5■■□□□ 1.19
R3HDM2-206ENST00000429355 UBTFP17480 764 aaKnown RBP22.48■■□□□ 1.19
R3HDM2-206ENST00000429355 NEUROD1Q13562 356 aa22.47■■□□□ 1.19
R3HDM2-206ENST00000429355 TNIKQ9UKE5 1360 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms