RNA–Protein interactions for RNA: ENST00000428860.2

AL627313.1-201, humanhuman

BASIC

Gene AL627313.1, Length 238 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL627313.1-201ENST00000428860 NISCHQ9Y2I1 1504 aa26.61■■□□□ 1.85
AL627313.1-201ENST00000428860 CCDC180Q9P1Z9 1646 aa23.46■■□□□ 1.35
AL627313.1-201ENST00000428860 ZCCHC6Q5VYS8 1495 aaKnown RBP22.37■■□□□ 1.17
AL627313.1-201ENST00000428860 DCAF1Q9Y4B6 1507 aa22.16■■□□□ 1.14
AL627313.1-201ENST00000428860 ABCC9O60706 1549 aa21.99■■□□□ 1.11
AL627313.1-201ENST00000428860 MYO15BQ96JP2 1530 aa21.98■■□□□ 1.11
AL627313.1-201ENST00000428860 NACADO15069 1562 aa21.81■■□□□ 1.08
AL627313.1-201ENST00000428860 DCAF8L2P0C7V8 631 aa21.69■■□□□ 1.06
AL627313.1-201ENST00000428860 RB1CC1Q8TDY2 1594 aa21.64■■□□□ 1.05
AL627313.1-201ENST00000428860 SCRIBQ14160 1630 aa21.33■■□□□ 1
AL627313.1-201ENST00000428860 SHROOM4Q9ULL8 1493 aa21.32■■□□□ 1
AL627313.1-201ENST00000428860 UNC13AQ9UPW8 1703 aa21.17■□□□□ 0.98
AL627313.1-201ENST00000428860 BICRAQ9NZM4 1560 aa20.89■□□□□ 0.94
AL627313.1-201ENST00000428860 BAZ1AQ9NRL2 1556 aaPredicted RBP20.63■□□□□ 0.89
AL627313.1-201ENST00000428860 PABPN1Q86U42 306 aaKnown RBP eCLIP20.57■□□□□ 0.88
AL627313.1-201ENST00000428860 CECR2Q9BXF3 1484 aa20.56■□□□□ 0.88
AL627313.1-201ENST00000428860 SMARCA4P51532 1647 aa20.53■□□□□ 0.88
AL627313.1-201ENST00000428860 RSF1Q96T23 1441 aaPredicted RBP20.52■□□□□ 0.87
AL627313.1-201ENST00000428860 MROH2BQ7Z745 1585 aa20.47■□□□□ 0.87
AL627313.1-201ENST00000428860 SUPT5HO00267 1087 aaKnown RBP20.44■□□□□ 0.86
AL627313.1-201ENST00000428860 PEG3Q9GZU2 1588 aa20.36■□□□□ 0.85
AL627313.1-201ENST00000428860 WIZO95785 1651 aa20.32■□□□□ 0.84
AL627313.1-201ENST00000428860 EIF4G1Q04637 1599 aaKnown RBP20.3■□□□□ 0.84
AL627313.1-201ENST00000428860 SMARCA2P51531 1590 aa20.26■□□□□ 0.83
AL627313.1-201ENST00000428860 TOP2AP11388 1531 aaKnown RBP20.22■□□□□ 0.83
AL627313.1-201ENST00000428860 ATAD2BQ9ULI0 1458 aa20.16■□□□□ 0.82
AL627313.1-201ENST00000428860 HMGXB3Q12766 1538 aa20.11■□□□□ 0.81
AL627313.1-201ENST00000428860 BAZ1BQ9UIG0 1483 aaKnown RBP20.06■□□□□ 0.8
AL627313.1-201ENST00000428860 NCAPD3P42695 1498 aa20.05■□□□□ 0.8
AL627313.1-201ENST00000428860 CC2D2AQ9P2K1 1620 aa20.01■□□□□ 0.79
AL627313.1-201ENST00000428860 CCDC88BA6NC98 1476 aa19.88■□□□□ 0.77
AL627313.1-201ENST00000428860 PRDM2Q13029 1718 aa19.64■□□□□ 0.73
AL627313.1-201ENST00000428860 CHIC1Q5VXU3 224 aa19.57■□□□□ 0.72
AL627313.1-201ENST00000428860 CFTRP13569 1480 aa19.56■□□□□ 0.72
AL627313.1-201ENST00000428860 CADPSQ9ULU8 1353 aa19.47■□□□□ 0.71
AL627313.1-201ENST00000428860 LAMC3Q9Y6N6 1575 aa19.47■□□□□ 0.71
AL627313.1-201ENST00000428860 ABCC8Q09428 1581 aa19.38■□□□□ 0.69
AL627313.1-201ENST00000428860 WRNQ14191 1432 aaPredicted RBP eCLIP19.36■□□□□ 0.69
AL627313.1-201ENST00000428860 DNAJC5BQ9UF47 199 aa19.34■□□□□ 0.69
AL627313.1-201ENST00000428860 TRIM41Q8WV44 630 aa19.33■□□□□ 0.68
AL627313.1-201ENST00000428860 BIVM-ERCC5R4GMW8 1640 aa19.31■□□□□ 0.68
AL627313.1-201ENST00000428860 TOP2BQ02880 1626 aa19.29■□□□□ 0.68
AL627313.1-201ENST00000428860 SYNJ1O43426 1573 aa19.27■□□□□ 0.68
AL627313.1-201ENST00000428860 FANCD2Q9BXW9 1451 aa19.27■□□□□ 0.67
AL627313.1-201ENST00000428860 PDS5BQ9NTI5 1447 aa19.25■□□□□ 0.67
AL627313.1-201ENST00000428860 NESP48681 1621 aa19.25■□□□□ 0.67
AL627313.1-201ENST00000428860 CEP164Q9UPV0 1460 aa19.21■□□□□ 0.67
AL627313.1-201ENST00000428860 CUX1P39880 1505 aa19.19■□□□□ 0.66
AL627313.1-201ENST00000428860 KIF21AQ7Z4S6 1674 aa19.16■□□□□ 0.66
AL627313.1-201ENST00000428860 DNMBPQ6XZF7 1577 aa19.15■□□□□ 0.66
AL627313.1-201ENST00000428860 EEA1Q15075 1411 aa19.13■□□□□ 0.65
AL627313.1-201ENST00000428860 TOPBP1Q92547 1522 aa19.05■□□□□ 0.64
AL627313.1-201ENST00000428860 MRC2Q9UBG0 1479 aa19.02■□□□□ 0.63
AL627313.1-201ENST00000428860 URB2Q14146 1524 aaKnown RBP19.01■□□□□ 0.63
AL627313.1-201ENST00000428860 FGD5Q6ZNL6 1462 aa19■□□□□ 0.63
AL627313.1-201ENST00000428860 WDR62O43379 1518 aa18.96■□□□□ 0.63
AL627313.1-201ENST00000428860 ERCC6Q03468 1493 aa18.95■□□□□ 0.62
AL627313.1-201ENST00000428860 SOGA1O94964 1423 aa18.94■□□□□ 0.62
AL627313.1-201ENST00000428860 POLA1P09884 1462 aaPredicted RBP18.94■□□□□ 0.62
AL627313.1-201ENST00000428860 THOC2Q8NI27 1593 aaKnown RBP18.93■□□□□ 0.62
AL627313.1-201ENST00000428860 WDR97A6NE52 1622 aa18.92■□□□□ 0.62
AL627313.1-201ENST00000428860 KIF27Q86VH2 1401 aa18.91■□□□□ 0.62
AL627313.1-201ENST00000428860 ABCA10Q8WWZ4 1543 aa18.9■□□□□ 0.62
AL627313.1-201ENST00000428860 KIF21BO75037 1637 aa18.87■□□□□ 0.61
AL627313.1-201ENST00000428860 RUSC2Q8N2Y8 1516 aa18.85■□□□□ 0.61
AL627313.1-201ENST00000428860 CUX2O14529 1486 aa18.83■□□□□ 0.6
AL627313.1-201ENST00000428860 TARBP1Q13395 1621 aaKnown RBP18.82■□□□□ 0.6
AL627313.1-201ENST00000428860 FAM9AQ8IZU1 332 aaPredicted RBP18.82■□□□□ 0.6
AL627313.1-201ENST00000428860 CSRNP3Q8WYN3 585 aa18.82■□□□□ 0.6
AL627313.1-201ENST00000428860 ABCA5Q8WWZ7 1642 aa18.79■□□□□ 0.6
AL627313.1-201ENST00000428860 ERICH3Q5RHP9 1530 aa18.79■□□□□ 0.6
AL627313.1-201ENST00000428860 GOLGA3Q08378 1498 aa18.77■□□□□ 0.6
AL627313.1-201ENST00000428860 IFT140Q96RY7 1462 aa18.77■□□□□ 0.6
AL627313.1-201ENST00000428860 RAD54L2Q9Y4B4 1467 aa18.77■□□□□ 0.6
AL627313.1-201ENST00000428860 CUL7Q14999 1698 aa18.74■□□□□ 0.59
AL627313.1-201ENST00000428860 PRXQ9BXM0 1461 aa18.73■□□□□ 0.59
AL627313.1-201ENST00000428860 PBRM1Q86U86 1689 aa18.67■□□□□ 0.58
AL627313.1-201ENST00000428860 GAPVD1Q14C86 1478 aa18.67■□□□□ 0.58
AL627313.1-201ENST00000428860 LOC105371045A0A1W2PR82 267 aa18.67■□□□□ 0.58
AL627313.1-201ENST00000428860 IGF1RP08069 1367 aa18.66■□□□□ 0.58
AL627313.1-201ENST00000428860 TNIKQ9UKE5 1360 aa18.65■□□□□ 0.58
AL627313.1-201ENST00000428860 RAPGEF2Q9Y4G8 1499 aa18.63■□□□□ 0.57
AL627313.1-201ENST00000428860 EIF4G3O43432 1585 aaKnown RBP18.6■□□□□ 0.57
AL627313.1-201ENST00000428860 GRIN2BQ13224 1484 aa18.58■□□□□ 0.57
AL627313.1-201ENST00000428860 CARMIL1Q5VZK9 1371 aa18.58■□□□□ 0.57
AL627313.1-201ENST00000428860 TDRD9Q8NDG6 1382 aaKnown RBP18.57■□□□□ 0.56
AL627313.1-201ENST00000428860 ADAMTS12P58397 1594 aa18.55■□□□□ 0.56
AL627313.1-201ENST00000428860 ZNF608Q9ULD9 1512 aaPredicted RBP18.53■□□□□ 0.56
AL627313.1-201ENST00000428860 UBTFP17480 764 aaKnown RBP18.52■□□□□ 0.56
AL627313.1-201ENST00000428860 CEP162Q5TB80 1403 aa18.51■□□□□ 0.55
AL627313.1-201ENST00000428860 AQRO60306 1485 aaKnown RBP eCLIP18.5■□□□□ 0.55
AL627313.1-201ENST00000428860 CTTNBP2Q8WZ74 1663 aa18.5■□□□□ 0.55
AL627313.1-201ENST00000428860 FHAD1B1AJZ9 1412 aa18.49■□□□□ 0.55
AL627313.1-201ENST00000428860 MAGI1Q96QZ7 1491 aaPredicted RBP18.49■□□□□ 0.55
AL627313.1-201ENST00000428860 EHMT2Q96KQ7 1210 aa18.44■□□□□ 0.54
AL627313.1-201ENST00000428860 SNAPC4Q5SXM2 1469 aa18.42■□□□□ 0.54
AL627313.1-201ENST00000428860 CLIP1P30622 1438 aa18.4■□□□□ 0.54
AL627313.1-201ENST00000428860 SYNJ2O15056 1496 aa18.38■□□□□ 0.53
AL627313.1-201ENST00000428860 EFCAB5A4FU69 1503 aa18.35■□□□□ 0.53
AL627313.1-201ENST00000428860 GRIN2AQ12879 1464 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms