RNA–Protein interactions for RNA: ENST00000428835.5

HLA-DPB1-212, Transcript of major histocompatibility complex, class II, DP beta 1, humanhuman

APPRIS ALT2

Gene HLA-DPB1, Length 688 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1-212ENST00000428835 NISCHQ9Y2I1 1504 aa48.74■■■■■ 5.39
HLA-DPB1-212ENST00000428835 CCDC180Q9P1Z9 1646 aa43.19■■■■■ 4.5
HLA-DPB1-212ENST00000428835 ABCC9O60706 1549 aa42.28■■■■■ 4.36
HLA-DPB1-212ENST00000428835 DCAF8L2P0C7V8 631 aa40.88■■■■■ 4.13
HLA-DPB1-212ENST00000428835 RB1CC1Q8TDY2 1594 aa40.66■■■■■ 4.1
HLA-DPB1-212ENST00000428835 NACADO15069 1562 aa40.65■■■■■ 4.1
HLA-DPB1-212ENST00000428835 ZCCHC6Q5VYS8 1495 aaKnown RBP40.6■■■■■ 4.09
HLA-DPB1-212ENST00000428835 MYO15BQ96JP2 1530 aa40.42■■■■■ 4.06
HLA-DPB1-212ENST00000428835 DCAF1Q9Y4B6 1507 aa40.29■■■■■ 4.04
HLA-DPB1-212ENST00000428835 UNC13AQ9UPW8 1703 aa39.64■■■■□ 3.94
HLA-DPB1-212ENST00000428835 PABPN1Q86U42 306 aaKnown RBP eCLIP39.61■■■■□ 3.93
HLA-DPB1-212ENST00000428835 SCRIBQ14160 1630 aa39.51■■■■□ 3.91
HLA-DPB1-212ENST00000428835 BICRAQ9NZM4 1560 aa39.4■■■■□ 3.9
HLA-DPB1-212ENST00000428835 SHROOM4Q9ULL8 1493 aa38.98■■■■□ 3.83
HLA-DPB1-212ENST00000428835 DNAJC5BQ9UF47 199 aa38.73■■■■□ 3.79
HLA-DPB1-212ENST00000428835 EIF4G1Q04637 1599 aaKnown RBP38.37■■■■□ 3.73
HLA-DPB1-212ENST00000428835 CC2D2AQ9P2K1 1620 aa38.2■■■■□ 3.7
HLA-DPB1-212ENST00000428835 CECR2Q9BXF3 1484 aa37.99■■■■□ 3.67
HLA-DPB1-212ENST00000428835 BAZ1AQ9NRL2 1556 aaPredicted RBP37.76■■■■□ 3.64
HLA-DPB1-212ENST00000428835 SMARCA4P51532 1647 aa37.76■■■■□ 3.64
HLA-DPB1-212ENST00000428835 MROH2BQ7Z745 1585 aa37.58■■■■□ 3.61
HLA-DPB1-212ENST00000428835 ATAD2BQ9ULI0 1458 aa37.58■■■■□ 3.61
HLA-DPB1-212ENST00000428835 NCAPD3P42695 1498 aa37.53■■■■□ 3.6
HLA-DPB1-212ENST00000428835 SMARCA2P51531 1590 aa37.52■■■■□ 3.6
HLA-DPB1-212ENST00000428835 PEG3Q9GZU2 1588 aa37.36■■■■□ 3.57
HLA-DPB1-212ENST00000428835 HMGXB3Q12766 1538 aa37.31■■■■□ 3.56
HLA-DPB1-212ENST00000428835 BAZ1BQ9UIG0 1483 aaKnown RBP37.29■■■■□ 3.56
HLA-DPB1-212ENST00000428835 RSF1Q96T23 1441 aaPredicted RBP37.22■■■■□ 3.55
HLA-DPB1-212ENST00000428835 WIZO95785 1651 aa37.15■■■■□ 3.54
HLA-DPB1-212ENST00000428835 TOP2AP11388 1531 aaKnown RBP36.77■■■■□ 3.48
HLA-DPB1-212ENST00000428835 NESP48681 1621 aa36.6■■■■□ 3.45
HLA-DPB1-212ENST00000428835 SUPT5HO00267 1087 aaKnown RBP36.5■■■■□ 3.43
HLA-DPB1-212ENST00000428835 CADPSQ9ULU8 1353 aa36.49■■■■□ 3.43
HLA-DPB1-212ENST00000428835 LAMC3Q9Y6N6 1575 aa36.49■■■■□ 3.43
HLA-DPB1-212ENST00000428835 ERCC6Q03468 1493 aa36.45■■■■□ 3.43
HLA-DPB1-212ENST00000428835 CCDC88BA6NC98 1476 aa36.38■■■■□ 3.41
HLA-DPB1-212ENST00000428835 PDS5BQ9NTI5 1447 aa36.32■■■■□ 3.4
HLA-DPB1-212ENST00000428835 CFTRP13569 1480 aa36.25■■■■□ 3.39
HLA-DPB1-212ENST00000428835 KIF21AQ7Z4S6 1674 aa36.1■■■■□ 3.37
HLA-DPB1-212ENST00000428835 FANCD2Q9BXW9 1451 aa36.05■■■■□ 3.36
HLA-DPB1-212ENST00000428835 CEP164Q9UPV0 1460 aa35.98■■■■□ 3.35
HLA-DPB1-212ENST00000428835 CUX2O14529 1486 aa35.96■■■■□ 3.35
HLA-DPB1-212ENST00000428835 THOC2Q8NI27 1593 aaKnown RBP35.93■■■■□ 3.34
HLA-DPB1-212ENST00000428835 MRC2Q9UBG0 1479 aa35.9■■■■□ 3.34
HLA-DPB1-212ENST00000428835 PRDM2Q13029 1718 aa35.86■■■■□ 3.33
HLA-DPB1-212ENST00000428835 WDR62O43379 1518 aa35.73■■■■□ 3.31
HLA-DPB1-212ENST00000428835 URB2Q14146 1524 aaKnown RBP35.65■■■■□ 3.3
HLA-DPB1-212ENST00000428835 ABCC8Q09428 1581 aa35.48■■■■□ 3.27
HLA-DPB1-212ENST00000428835 TOPBP1Q92547 1522 aa35.47■■■■□ 3.27
HLA-DPB1-212ENST00000428835 DNMBPQ6XZF7 1577 aa35.41■■■■□ 3.26
HLA-DPB1-212ENST00000428835 CUX1P39880 1505 aa35.24■■■■□ 3.23
HLA-DPB1-212ENST00000428835 IFT140Q96RY7 1462 aa35.22■■■■□ 3.23
HLA-DPB1-212ENST00000428835 POLA1P09884 1462 aaPredicted RBP35.17■■■■□ 3.22
HLA-DPB1-212ENST00000428835 FGD5Q6ZNL6 1462 aa35.12■■■■□ 3.21
HLA-DPB1-212ENST00000428835 WRNQ14191 1432 aaPredicted RBP eCLIP35.1■■■■□ 3.21
HLA-DPB1-212ENST00000428835 SOGA1O94964 1423 aa35.09■■■■□ 3.21
HLA-DPB1-212ENST00000428835 ZNF608Q9ULD9 1512 aaPredicted RBP35.06■■■■□ 3.2
HLA-DPB1-212ENST00000428835 RAD54L2Q9Y4B4 1467 aa35.05■■■■□ 3.2
HLA-DPB1-212ENST00000428835 TARBP1Q13395 1621 aaKnown RBP35.02■■■■□ 3.2
HLA-DPB1-212ENST00000428835 SYNJ1O43426 1573 aa34.95■■■■□ 3.18
HLA-DPB1-212ENST00000428835 TOP2BQ02880 1626 aa34.95■■■■□ 3.18
HLA-DPB1-212ENST00000428835 AQRO60306 1485 aaKnown RBP eCLIP34.91■■■■□ 3.18
HLA-DPB1-212ENST00000428835 BIVM-ERCC5R4GMW8 1640 aa34.91■■■■□ 3.18
HLA-DPB1-212ENST00000428835 TDRD9Q8NDG6 1382 aaKnown RBP34.89■■■■□ 3.18
HLA-DPB1-212ENST00000428835 EIF4G3O43432 1585 aaKnown RBP34.86■■■■□ 3.17
HLA-DPB1-212ENST00000428835 DNAJC5Q9H3Z4 198 aa34.79■■■■□ 3.16
HLA-DPB1-212ENST00000428835 ABCA10Q8WWZ4 1543 aa34.76■■■■□ 3.16
HLA-DPB1-212ENST00000428835 WDR97A6NE52 1622 aa34.73■■■■□ 3.15
HLA-DPB1-212ENST00000428835 GAPVD1Q14C86 1478 aa34.66■■■■□ 3.14
HLA-DPB1-212ENST00000428835 GRIN2BQ13224 1484 aa34.63■■■■□ 3.13
HLA-DPB1-212ENST00000428835 OSCARQ8IYS5 282 aa34.62■■■■□ 3.13
HLA-DPB1-212ENST00000428835 ABCA5Q8WWZ7 1642 aa34.56■■■■□ 3.12
HLA-DPB1-212ENST00000428835 FBLN2P98095 1184 aa34.56■■■■□ 3.12
HLA-DPB1-212ENST00000428835 SNAPC4Q5SXM2 1469 aa34.56■■■■□ 3.12
HLA-DPB1-212ENST00000428835 MAGI1Q96QZ7 1491 aaPredicted RBP34.51■■■■□ 3.11
HLA-DPB1-212ENST00000428835 PBRM1Q86U86 1689 aa34.47■■■■□ 3.11
HLA-DPB1-212ENST00000428835 CHMP7Q8WUX9 453 aaPredicted RBP34.47■■■■□ 3.11
HLA-DPB1-212ENST00000428835 TRIM41Q8WV44 630 aa34.46■■■■□ 3.11
HLA-DPB1-212ENST00000428835 CHD1O14646 1710 aa34.38■■■■□ 3.09
HLA-DPB1-212ENST00000428835 SYNJ2O15056 1496 aa34.38■■■■□ 3.09
HLA-DPB1-212ENST00000428835 KIF27Q86VH2 1401 aa34.38■■■■□ 3.09
HLA-DPB1-212ENST00000428835 ERICH3Q5RHP9 1530 aa34.35■■■■□ 3.09
HLA-DPB1-212ENST00000428835 FHAD1B1AJZ9 1412 aa34.27■■■■□ 3.08
HLA-DPB1-212ENST00000428835 ADAMTS12P58397 1594 aa34.24■■■■□ 3.07
HLA-DPB1-212ENST00000428835 IGF1RP08069 1367 aa34.23■■■■□ 3.07
HLA-DPB1-212ENST00000428835 GRIN2AQ12879 1464 aa34.16■■■■□ 3.06
HLA-DPB1-212ENST00000428835 CHIC1Q5VXU3 224 aa34.1■■■■□ 3.05
HLA-DPB1-212ENST00000428835 RUSC2Q8N2Y8 1516 aa34.09■■■■□ 3.05
HLA-DPB1-212ENST00000428835 CARMIL1Q5VZK9 1371 aa34.04■■■■□ 3.04
HLA-DPB1-212ENST00000428835 CLASP1Q7Z460 1538 aa34.04■■■■□ 3.04
HLA-DPB1-212ENST00000428835 CUL7Q14999 1698 aa34.03■■■■□ 3.04
HLA-DPB1-212ENST00000428835 NUP160Q12769 1436 aa34■■■■□ 3.03
HLA-DPB1-212ENST00000428835 CEP170Q5SW79 1584 aa33.96■■■■□ 3.03
HLA-DPB1-212ENST00000428835 ARHGEF11O15085 1522 aa33.94■■■■□ 3.02
HLA-DPB1-212ENST00000428835 RIMBP3CA6NJZ7 1639 aa33.9■■■■□ 3.02
HLA-DPB1-212ENST00000428835 RIMBP3BA6NNM3 1639 aa33.9■■■■□ 3.02
HLA-DPB1-212ENST00000428835 RIMBP3Q9UFD9 1639 aa33.9■■■■□ 3.02
HLA-DPB1-212ENST00000428835 RAPGEF2Q9Y4G8 1499 aa33.82■■■■□ 3
HLA-DPB1-212ENST00000428835 CSRNP3Q8WYN3 585 aa33.8■■■■□ 3
HLA-DPB1-212ENST00000428835 EEA1Q15075 1411 aa33.78■■■■□ 3
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms