RNA–Protein interactions for RNA: ENST00000428481.1

PQLC3-203, Transcript of PQ loop repeat containing 3, humanhuman

TSL 2

Gene PQLC3, Length 831 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PQLC3-203ENST00000428481 NISCHQ9Y2I1 1504 aa33.78■■■■□ 3
PQLC3-203ENST00000428481 ABCC9O60706 1549 aa31.24■■■□□ 2.59
PQLC3-203ENST00000428481 CCDC180Q9P1Z9 1646 aa30.56■■■□□ 2.48
PQLC3-203ENST00000428481 DNAJC5BQ9UF47 199 aa30.02■■■□□ 2.4
PQLC3-203ENST00000428481 RB1CC1Q8TDY2 1594 aa29.45■■■□□ 2.31
PQLC3-203ENST00000428481 NACADO15069 1562 aa29.12■■■□□ 2.25
PQLC3-203ENST00000428481 PABPN1Q86U42 306 aaKnown RBP eCLIP29.01■■■□□ 2.23
PQLC3-203ENST00000428481 DCAF8L2P0C7V8 631 aa28.77■■■□□ 2.2
PQLC3-203ENST00000428481 UNC13AQ9UPW8 1703 aa28.7■■■□□ 2.19
PQLC3-203ENST00000428481 BICRAQ9NZM4 1560 aa28.63■■■□□ 2.17
PQLC3-203ENST00000428481 MYO15BQ96JP2 1530 aa28.54■■■□□ 2.16
PQLC3-203ENST00000428481 CECR2Q9BXF3 1484 aa28.25■■■□□ 2.11
PQLC3-203ENST00000428481 SHROOM4Q9ULL8 1493 aa28.23■■■□□ 2.11
PQLC3-203ENST00000428481 CC2D2AQ9P2K1 1620 aa28.19■■■□□ 2.1
PQLC3-203ENST00000428481 DNAJC5Q9H3Z4 198 aa28.12■■■□□ 2.09
PQLC3-203ENST00000428481 EIF4G1Q04637 1599 aaKnown RBP27.98■■■□□ 2.07
PQLC3-203ENST00000428481 DCAF1Q9Y4B6 1507 aa27.9■■■□□ 2.06
PQLC3-203ENST00000428481 ZCCHC6Q5VYS8 1495 aaKnown RBP27.83■■■□□ 2.05
PQLC3-203ENST00000428481 SCRIBQ14160 1630 aa27.75■■■□□ 2.03
PQLC3-203ENST00000428481 CUX2O14529 1486 aa27.27■■□□□ 1.96
PQLC3-203ENST00000428481 ERCC6Q03468 1493 aa27.02■■□□□ 1.92
PQLC3-203ENST00000428481 NCAPD3P42695 1498 aa26.94■■□□□ 1.9
PQLC3-203ENST00000428481 ATAD2BQ9ULI0 1458 aa26.72■■□□□ 1.87
PQLC3-203ENST00000428481 NESP48681 1621 aa26.65■■□□□ 1.86
PQLC3-203ENST00000428481 HMGXB3Q12766 1538 aa26.61■■□□□ 1.85
PQLC3-203ENST00000428481 SMARCA2P51531 1590 aa26.58■■□□□ 1.85
PQLC3-203ENST00000428481 THOC2Q8NI27 1593 aaKnown RBP26.5■■□□□ 1.83
PQLC3-203ENST00000428481 TRIM41Q8WV44 630 aa26.47■■□□□ 1.83
PQLC3-203ENST00000428481 SMARCA4P51532 1647 aa26.45■■□□□ 1.82
PQLC3-203ENST00000428481 LAMC3Q9Y6N6 1575 aa26.37■■□□□ 1.81
PQLC3-203ENST00000428481 BAZ1BQ9UIG0 1483 aaKnown RBP26.37■■□□□ 1.81
PQLC3-203ENST00000428481 PDS5BQ9NTI5 1447 aa26.28■■□□□ 1.8
PQLC3-203ENST00000428481 PEG3Q9GZU2 1588 aa26.27■■□□□ 1.8
PQLC3-203ENST00000428481 BAZ1AQ9NRL2 1556 aaPredicted RBP26.24■■□□□ 1.79
PQLC3-203ENST00000428481 KIF21AQ7Z4S6 1674 aa26.22■■□□□ 1.79
PQLC3-203ENST00000428481 CADPSQ9ULU8 1353 aa26.07■■□□□ 1.76
PQLC3-203ENST00000428481 MRC2Q9UBG0 1479 aa26.05■■□□□ 1.76
PQLC3-203ENST00000428481 WDR62O43379 1518 aa26.03■■□□□ 1.76
PQLC3-203ENST00000428481 MROH2BQ7Z745 1585 aa25.99■■□□□ 1.75
PQLC3-203ENST00000428481 OSCARQ8IYS5 282 aa25.95■■□□□ 1.74
PQLC3-203ENST00000428481 CEP164Q9UPV0 1460 aa25.8■■□□□ 1.72
PQLC3-203ENST00000428481 FANCD2Q9BXW9 1451 aa25.72■■□□□ 1.71
PQLC3-203ENST00000428481 CFTRP13569 1480 aa25.62■■□□□ 1.69
PQLC3-203ENST00000428481 WIZO95785 1651 aa25.6■■□□□ 1.69
PQLC3-203ENST00000428481 RIMBP3CA6NJZ7 1639 aa25.58■■□□□ 1.69
PQLC3-203ENST00000428481 RIMBP3BA6NNM3 1639 aa25.58■■□□□ 1.69
PQLC3-203ENST00000428481 RIMBP3Q9UFD9 1639 aa25.58■■□□□ 1.69
PQLC3-203ENST00000428481 URB2Q14146 1524 aaKnown RBP25.55■■□□□ 1.68
PQLC3-203ENST00000428481 ARHGEF11O15085 1522 aa25.47■■□□□ 1.67
PQLC3-203ENST00000428481 CYB5RLQ6IPT4 315 aa25.35■■□□□ 1.65
PQLC3-203ENST00000428481 ZNF608Q9ULD9 1512 aaPredicted RBP25.35■■□□□ 1.65
PQLC3-203ENST00000428481 IFT140Q96RY7 1462 aa25.34■■□□□ 1.65
PQLC3-203ENST00000428481 TOP2AP11388 1531 aaKnown RBP25.26■■□□□ 1.63
PQLC3-203ENST00000428481 TRHP20396 242 aaPredicted RBP25.25■■□□□ 1.63
PQLC3-203ENST00000428481 RSF1Q96T23 1441 aaPredicted RBP25.24■■□□□ 1.63
PQLC3-203ENST00000428481 ARAP1Q96P48 1450 aa25.16■■□□□ 1.62
PQLC3-203ENST00000428481 PRDM2Q13029 1718 aa25.16■■□□□ 1.62
PQLC3-203ENST00000428481 TOPBP1Q92547 1522 aa25.15■■□□□ 1.62
PQLC3-203ENST00000428481 EIF4G3O43432 1585 aaKnown RBP25.12■■□□□ 1.61
PQLC3-203ENST00000428481 ABCC8Q09428 1581 aa25.1■■□□□ 1.61
PQLC3-203ENST00000428481 AQRO60306 1485 aaKnown RBP eCLIP25.04■■□□□ 1.6
PQLC3-203ENST00000428481 CHD1O14646 1710 aa25.03■■□□□ 1.6
PQLC3-203ENST00000428481 AEBP2Q6ZN18 517 aaPredicted RBP25.03■■□□□ 1.6
PQLC3-203ENST00000428481 CCDC88BA6NC98 1476 aa25.02■■□□□ 1.6
PQLC3-203ENST00000428481 FBLN2P98095 1184 aa24.99■■□□□ 1.59
PQLC3-203ENST00000428481 TARBP1Q13395 1621 aaKnown RBP24.98■■□□□ 1.59
PQLC3-203ENST00000428481 DNMBPQ6XZF7 1577 aa24.98■■□□□ 1.59
PQLC3-203ENST00000428481 POLA1P09884 1462 aaPredicted RBP24.86■■□□□ 1.57
PQLC3-203ENST00000428481 CLASP1Q7Z460 1538 aa24.81■■□□□ 1.56
PQLC3-203ENST00000428481 TDRD9Q8NDG6 1382 aaKnown RBP24.78■■□□□ 1.56
PQLC3-203ENST00000428481 RAD54L2Q9Y4B4 1467 aa24.77■■□□□ 1.56
PQLC3-203ENST00000428481 SOGA1O94964 1423 aa24.75■■□□□ 1.55
PQLC3-203ENST00000428481 CHMP7Q8WUX9 453 aaPredicted RBP24.74■■□□□ 1.55
PQLC3-203ENST00000428481 SNAPC4Q5SXM2 1469 aa24.73■■□□□ 1.55
PQLC3-203ENST00000428481 SYNJ1O43426 1573 aa24.71■■□□□ 1.55
PQLC3-203ENST00000428481 WDR97A6NE52 1622 aa24.7■■□□□ 1.54
PQLC3-203ENST00000428481 MAGI1Q96QZ7 1491 aaPredicted RBP24.68■■□□□ 1.54
PQLC3-203ENST00000428481 SYNJ2O15056 1496 aa24.61■■□□□ 1.53
PQLC3-203ENST00000428481 GAPVD1Q14C86 1478 aa24.61■■□□□ 1.53
PQLC3-203ENST00000428481 GRIN2BQ13224 1484 aa24.6■■□□□ 1.53
PQLC3-203ENST00000428481 FGD5Q6ZNL6 1462 aa24.58■■□□□ 1.53
PQLC3-203ENST00000428481 CUX1P39880 1505 aa24.45■■□□□ 1.51
PQLC3-203ENST00000428481 PBRM1Q86U86 1689 aa24.36■■□□□ 1.49
PQLC3-203ENST00000428481 ERCC6L2Q5T890 1561 aa24.34■■□□□ 1.49
PQLC3-203ENST00000428481 ABCA10Q8WWZ4 1543 aa24.3■■□□□ 1.48
PQLC3-203ENST00000428481 GRIN2AQ12879 1464 aa24.28■■□□□ 1.48
PQLC3-203ENST00000428481 ABCA5Q8WWZ7 1642 aa24.28■■□□□ 1.48
PQLC3-203ENST00000428481 CEP170Q5SW79 1584 aa24.27■■□□□ 1.48
PQLC3-203ENST00000428481 NUP160Q12769 1436 aa24.27■■□□□ 1.48
PQLC3-203ENST00000428481 KIF13AQ9H1H9 1805 aa24.2■■□□□ 1.46
PQLC3-203ENST00000428481 SHROOM2Q13796 1616 aa24.19■■□□□ 1.46
PQLC3-203ENST00000428481 ADAMTS12P58397 1594 aa24.13■■□□□ 1.45
PQLC3-203ENST00000428481 FHAD1B1AJZ9 1412 aa24.1■■□□□ 1.45
PQLC3-203ENST00000428481 ABCC10Q5T3U5 1492 aa24.08■■□□□ 1.45
PQLC3-203ENST00000428481 KDM4FA0A1W2PPD8 638 aa24.08■■□□□ 1.45
PQLC3-203ENST00000428481 FAM69CQ0P6D2 419 aa24.08■■□□□ 1.45
PQLC3-203ENST00000428481 WRNQ14191 1432 aaPredicted RBP eCLIP24.08■■□□□ 1.44
PQLC3-203ENST00000428481 SUPT5HO00267 1087 aaKnown RBP24.07■■□□□ 1.44
PQLC3-203ENST00000428481 PRG4Q92954 1404 aaPredicted RBP24.05■■□□□ 1.44
PQLC3-203ENST00000428481 ILDR1Q86SU0 546 aaPredicted RBP24.05■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms