RNA–Protein interactions for RNA: ENST00000428454.1

PABPC1P12-201, Transcript of poly(A) binding protein cytoplasmic 1 pseudogene 12, humanhuman

BASIC

Gene PABPC1P12, Length 2,175 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1P12-201ENST00000428454 NISCHQ9Y2I1 1504 aa20.78■□□□□ 0.92
PABPC1P12-201ENST00000428454 CCDC180Q9P1Z9 1646 aa17.91■□□□□ 0.46
PABPC1P12-201ENST00000428454 ZCCHC6Q5VYS8 1495 aaKnown RBP17.51■□□□□ 0.39
PABPC1P12-201ENST00000428454 SHROOM4Q9ULL8 1493 aa17.31■□□□□ 0.36
PABPC1P12-201ENST00000428454 DCAF8L2P0C7V8 631 aa17.23■□□□□ 0.35
PABPC1P12-201ENST00000428454 DCAF1Q9Y4B6 1507 aa17.1■□□□□ 0.33
PABPC1P12-201ENST00000428454 ABCC9O60706 1549 aa16.83■□□□□ 0.28
PABPC1P12-201ENST00000428454 SUPT5HO00267 1087 aaKnown RBP16.78■□□□□ 0.28
PABPC1P12-201ENST00000428454 MYO15BQ96JP2 1530 aa16.77■□□□□ 0.28
PABPC1P12-201ENST00000428454 SCRIBQ14160 1630 aa16.64■□□□□ 0.25
PABPC1P12-201ENST00000428454 NACADO15069 1562 aa16.63■□□□□ 0.25
PABPC1P12-201ENST00000428454 RB1CC1Q8TDY2 1594 aa16.45■□□□□ 0.22
PABPC1P12-201ENST00000428454 RSF1Q96T23 1441 aaPredicted RBP16.26■□□□□ 0.19
PABPC1P12-201ENST00000428454 CECR2Q9BXF3 1484 aa16.18■□□□□ 0.18
PABPC1P12-201ENST00000428454 CHIC1Q5VXU3 224 aa16.16■□□□□ 0.18
PABPC1P12-201ENST00000428454 UNC13AQ9UPW8 1703 aa16.14■□□□□ 0.17
PABPC1P12-201ENST00000428454 MROH2BQ7Z745 1585 aa16.1■□□□□ 0.17
PABPC1P12-201ENST00000428454 BAZ1AQ9NRL2 1556 aaPredicted RBP16.01■□□□□ 0.15
PABPC1P12-201ENST00000428454 WIZO95785 1651 aa15.99■□□□□ 0.15
PABPC1P12-201ENST00000428454 PABPN1Q86U42 306 aaKnown RBP eCLIP15.97■□□□□ 0.15
PABPC1P12-201ENST00000428454 BICRAQ9NZM4 1560 aa15.97■□□□□ 0.15
PABPC1P12-201ENST00000428454 SMARCA4P51532 1647 aa15.91■□□□□ 0.14
PABPC1P12-201ENST00000428454 TOP2AP11388 1531 aaKnown RBP15.78■□□□□ 0.12
PABPC1P12-201ENST00000428454 TRIM41Q8WV44 630 aa15.7■□□□□ 0.1
PABPC1P12-201ENST00000428454 CCDC88BA6NC98 1476 aa15.67■□□□□ 0.1
PABPC1P12-201ENST00000428454 SMARCA2P51531 1590 aa15.66■□□□□ 0.1
PABPC1P12-201ENST00000428454 PEG3Q9GZU2 1588 aa15.66■□□□□ 0.1
PABPC1P12-201ENST00000428454 EIF4G1Q04637 1599 aaKnown RBP15.63■□□□□ 0.09
PABPC1P12-201ENST00000428454 LOC105371045A0A1W2PR82 267 aa15.62■□□□□ 0.09
PABPC1P12-201ENST00000428454 ATAD2BQ9ULI0 1458 aa15.59■□□□□ 0.09
PABPC1P12-201ENST00000428454 BAZ1BQ9UIG0 1483 aaKnown RBP15.53■□□□□ 0.08
PABPC1P12-201ENST00000428454 FAM9AQ8IZU1 332 aaPredicted RBP15.51■□□□□ 0.07
PABPC1P12-201ENST00000428454 ABCC8Q09428 1581 aa15.47■□□□□ 0.07
PABPC1P12-201ENST00000428454 NCAPD3P42695 1498 aa15.37■□□□□ 0.05
PABPC1P12-201ENST00000428454 HMGXB3Q12766 1538 aa15.36■□□□□ 0.05
PABPC1P12-201ENST00000428454 EHMT2Q96KQ7 1210 aa15.35■□□□□ 0.05
PABPC1P12-201ENST00000428454 AEBP2Q6ZN18 517 aaPredicted RBP15.32■□□□□ 0.04
PABPC1P12-201ENST00000428454 WRNQ14191 1432 aaPredicted RBP eCLIP15.29■□□□□ 0.04
PABPC1P12-201ENST00000428454 SOGA1O94964 1423 aa15.24■□□□□ 0.03
PABPC1P12-201ENST00000428454 SYNJ1O43426 1573 aa15.23■□□□□ 0.03
PABPC1P12-201ENST00000428454 PCGF6Q9BYE7 350 aa15.21■□□□□ 0.02
PABPC1P12-201ENST00000428454 CC2D2AQ9P2K1 1620 aa15.19■□□□□ 0.02
PABPC1P12-201ENST00000428454 RUSC2Q8N2Y8 1516 aa15.17■□□□□ 0.02
PABPC1P12-201ENST00000428454 EEA1Q15075 1411 aa15.17■□□□□ 0.02
PABPC1P12-201ENST00000428454 CFTRP13569 1480 aa15.14■□□□□ 0.01
PABPC1P12-201ENST00000428454 CSRNP3Q8WYN3 585 aa15.13■□□□□ 0.01
PABPC1P12-201ENST00000428454 TOP2BQ02880 1626 aa15.1■□□□□ 0.01
PABPC1P12-201ENST00000428454 BIVM-ERCC5R4GMW8 1640 aa15.07■□□□□ 0
PABPC1P12-201ENST00000428454 TRIM26Q12899 539 aaPredicted RBP15.06■□□□□ 0
PABPC1P12-201ENST00000428454 CADPSQ9ULU8 1353 aa15.04■□□□□ -0
PABPC1P12-201ENST00000428454 CUX1P39880 1505 aa15.03■□□□□ -0
PABPC1P12-201ENST00000428454 TNIKQ9UKE5 1360 aa15.02■□□□□ -0
PABPC1P12-201ENST00000428454 GOLGA3Q08378 1498 aa15.02□□□□□ -0.01
PABPC1P12-201ENST00000428454 UBTFP17480 764 aaKnown RBP15.01□□□□□ -0.01
PABPC1P12-201ENST00000428454 PRDM2Q13029 1718 aa15.01□□□□□ -0.01
PABPC1P12-201ENST00000428454 CEP162Q5TB80 1403 aa15□□□□□ -0.01
PABPC1P12-201ENST00000428454 CEP164Q9UPV0 1460 aa14.98□□□□□ -0.01
PABPC1P12-201ENST00000428454 KIF21BO75037 1637 aa14.97□□□□□ -0.01
PABPC1P12-201ENST00000428454 HRCP23327 699 aa14.95□□□□□ -0.02
PABPC1P12-201ENST00000428454 PPARGC1BQ86YN6 1023 aaKnown RBP14.91□□□□□ -0.02
PABPC1P12-201ENST00000428454 RAPGEF2Q9Y4G8 1499 aa14.9□□□□□ -0.02
PABPC1P12-201ENST00000428454 FANCD2Q9BXW9 1451 aa14.89□□□□□ -0.03
PABPC1P12-201ENST00000428454 NESP48681 1621 aa14.87□□□□□ -0.03
PABPC1P12-201ENST00000428454 KIF27Q86VH2 1401 aa14.87□□□□□ -0.03
PABPC1P12-201ENST00000428454 PRXQ9BXM0 1461 aa14.83□□□□□ -0.04
PABPC1P12-201ENST00000428454 DNAJC5BQ9UF47 199 aa14.83□□□□□ -0.04
PABPC1P12-201ENST00000428454 FGD5Q6ZNL6 1462 aa14.82□□□□□ -0.04
PABPC1P12-201ENST00000428454 CLIP1P30622 1438 aa14.81□□□□□ -0.04
PABPC1P12-201ENST00000428454 ERICH3Q5RHP9 1530 aa14.81□□□□□ -0.04
PABPC1P12-201ENST00000428454 LAMC3Q9Y6N6 1575 aa14.8□□□□□ -0.04
PABPC1P12-201ENST00000428454 CUX2O14529 1486 aa14.8□□□□□ -0.04
PABPC1P12-201ENST00000428454 RANGAP1P46060 587 aaPredicted RBP14.77□□□□□ -0.04
PABPC1P12-201ENST00000428454 DNMBPQ6XZF7 1577 aa14.77□□□□□ -0.05
PABPC1P12-201ENST00000428454 TTBK1Q5TCY1 1321 aaPredicted RBP14.75□□□□□ -0.05
PABPC1P12-201ENST00000428454 TOPBP1Q92547 1522 aa14.75□□□□□ -0.05
PABPC1P12-201ENST00000428454 IGF1RP08069 1367 aa14.72□□□□□ -0.05
PABPC1P12-201ENST00000428454 POLA1P09884 1462 aaPredicted RBP14.71□□□□□ -0.05
PABPC1P12-201ENST00000428454 VPS8Q8N3P4 1428 aa14.71□□□□□ -0.06
PABPC1P12-201ENST00000428454 PDS5BQ9NTI5 1447 aa14.7□□□□□ -0.06
PABPC1P12-201ENST00000428454 RAD54L2Q9Y4B4 1467 aa14.7□□□□□ -0.06
PABPC1P12-201ENST00000428454 URB2Q14146 1524 aaKnown RBP14.68□□□□□ -0.06
PABPC1P12-201ENST00000428454 ABCA10Q8WWZ4 1543 aa14.66□□□□□ -0.06
PABPC1P12-201ENST00000428454 CARMIL1Q5VZK9 1371 aa14.66□□□□□ -0.06
PABPC1P12-201ENST00000428454 KIF21AQ7Z4S6 1674 aa14.64□□□□□ -0.07
PABPC1P12-201ENST00000428454 ARAP1Q96P48 1450 aa14.63□□□□□ -0.07
PABPC1P12-201ENST00000428454 APLP2Q06481 763 aa14.61□□□□□ -0.07
PABPC1P12-201ENST00000428454 ARHGAP35Q9NRY4 1499 aa14.57□□□□□ -0.08
PABPC1P12-201ENST00000428454 WDR97A6NE52 1622 aa14.57□□□□□ -0.08
PABPC1P12-201ENST00000428454 ZEB1P37275 1124 aaPredicted RBP14.57□□□□□ -0.08
PABPC1P12-201ENST00000428454 TDRD9Q8NDG6 1382 aaKnown RBP14.54□□□□□ -0.08
PABPC1P12-201ENST00000428454 CUL7Q14999 1698 aa14.53□□□□□ -0.08
PABPC1P12-201ENST00000428454 ABCA5Q8WWZ7 1642 aa14.52□□□□□ -0.09
PABPC1P12-201ENST00000428454 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.5□□□□□ -0.09
PABPC1P12-201ENST00000428454 GAPVD1Q14C86 1478 aa14.5□□□□□ -0.09
PABPC1P12-201ENST00000428454 MRC2Q9UBG0 1479 aa14.5□□□□□ -0.09
PABPC1P12-201ENST00000428454 TARBP1Q13395 1621 aaKnown RBP14.48□□□□□ -0.09
PABPC1P12-201ENST00000428454 CCER1Q8TC90 406 aaPredicted RBP14.46□□□□□ -0.09
PABPC1P12-201ENST00000428454 KANK4Q5T7N3 995 aaPredicted RBP14.45□□□□□ -0.1
PABPC1P12-201ENST00000428454 CTTNBP2Q8WZ74 1663 aa14.42□□□□□ -0.1
PABPC1P12-201ENST00000428454 P3H3Q8IVL6 736 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms