RNA–Protein interactions for RNA: ENST00000427797.5

PSPH-209, Transcript of phosphoserine phosphatase, humanhuman

TSL 3

Gene PSPH, Length 809 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPH-209ENST00000427797 NISCHQ9Y2I1 1504 aa38.08■■■■□ 3.69
PSPH-209ENST00000427797 CCDC180Q9P1Z9 1646 aa33.46■■■□□ 2.95
PSPH-209ENST00000427797 ABCC9O60706 1549 aa32.39■■■□□ 2.78
PSPH-209ENST00000427797 ZCCHC6Q5VYS8 1495 aaKnown RBP31.83■■■□□ 2.69
PSPH-209ENST00000427797 DCAF8L2P0C7V8 631 aa31.74■■■□□ 2.67
PSPH-209ENST00000427797 DCAF1Q9Y4B6 1507 aa31.47■■■□□ 2.63
PSPH-209ENST00000427797 NACADO15069 1562 aa31.4■■■□□ 2.62
PSPH-209ENST00000427797 MYO15BQ96JP2 1530 aa31.38■■■□□ 2.61
PSPH-209ENST00000427797 RB1CC1Q8TDY2 1594 aa31.29■■■□□ 2.6
PSPH-209ENST00000427797 SCRIBQ14160 1630 aa30.72■■■□□ 2.51
PSPH-209ENST00000427797 SHROOM4Q9ULL8 1493 aa30.57■■■□□ 2.48
PSPH-209ENST00000427797 UNC13AQ9UPW8 1703 aa30.54■■■□□ 2.48
PSPH-209ENST00000427797 PABPN1Q86U42 306 aaKnown RBP eCLIP30.46■■■□□ 2.47
PSPH-209ENST00000427797 BICRAQ9NZM4 1560 aa30.38■■■□□ 2.45
PSPH-209ENST00000427797 CECR2Q9BXF3 1484 aa29.68■■■□□ 2.34
PSPH-209ENST00000427797 EIF4G1Q04637 1599 aaKnown RBP29.51■■■□□ 2.31
PSPH-209ENST00000427797 BAZ1AQ9NRL2 1556 aaPredicted RBP29.43■■■□□ 2.3
PSPH-209ENST00000427797 MROH2BQ7Z745 1585 aa29.4■■■□□ 2.3
PSPH-209ENST00000427797 SMARCA4P51532 1647 aa29.39■■■□□ 2.3
PSPH-209ENST00000427797 DNAJC5BQ9UF47 199 aa29.33■■■□□ 2.29
PSPH-209ENST00000427797 RSF1Q96T23 1441 aaPredicted RBP29.28■■■□□ 2.28
PSPH-209ENST00000427797 CC2D2AQ9P2K1 1620 aa29.26■■■□□ 2.27
PSPH-209ENST00000427797 ATAD2BQ9ULI0 1458 aa29.15■■■□□ 2.26
PSPH-209ENST00000427797 SUPT5HO00267 1087 aaKnown RBP29.07■■■□□ 2.24
PSPH-209ENST00000427797 WIZO95785 1651 aa29.07■■■□□ 2.24
PSPH-209ENST00000427797 SMARCA2P51531 1590 aa29.06■■■□□ 2.24
PSPH-209ENST00000427797 PEG3Q9GZU2 1588 aa29.06■■■□□ 2.24
PSPH-209ENST00000427797 NCAPD3P42695 1498 aa29.03■■■□□ 2.24
PSPH-209ENST00000427797 BAZ1BQ9UIG0 1483 aaKnown RBP28.91■■■□□ 2.22
PSPH-209ENST00000427797 HMGXB3Q12766 1538 aa28.86■■■□□ 2.21
PSPH-209ENST00000427797 TOP2AP11388 1531 aaKnown RBP28.78■■■□□ 2.2
PSPH-209ENST00000427797 CCDC88BA6NC98 1476 aa28.52■■■□□ 2.16
PSPH-209ENST00000427797 CADPSQ9ULU8 1353 aa28.24■■■□□ 2.11
PSPH-209ENST00000427797 NESP48681 1621 aa28.21■■■□□ 2.11
PSPH-209ENST00000427797 CFTRP13569 1480 aa28.16■■■□□ 2.1
PSPH-209ENST00000427797 LAMC3Q9Y6N6 1575 aa28.09■■■□□ 2.09
PSPH-209ENST00000427797 PDS5BQ9NTI5 1447 aa27.95■■■□□ 2.07
PSPH-209ENST00000427797 FANCD2Q9BXW9 1451 aa27.89■■■□□ 2.06
PSPH-209ENST00000427797 ERCC6Q03468 1493 aa27.83■■■□□ 2.04
PSPH-209ENST00000427797 PRDM2Q13029 1718 aa27.82■■■□□ 2.04
PSPH-209ENST00000427797 CEP164Q9UPV0 1460 aa27.77■■■□□ 2.04
PSPH-209ENST00000427797 KIF21AQ7Z4S6 1674 aa27.77■■■□□ 2.04
PSPH-209ENST00000427797 ABCC8Q09428 1581 aa27.63■■■□□ 2.01
PSPH-209ENST00000427797 MRC2Q9UBG0 1479 aa27.63■■■□□ 2.01
PSPH-209ENST00000427797 URB2Q14146 1524 aaKnown RBP27.6■■■□□ 2.01
PSPH-209ENST00000427797 WRNQ14191 1432 aaPredicted RBP eCLIP27.57■■■□□ 2
PSPH-209ENST00000427797 THOC2Q8NI27 1593 aaKnown RBP27.55■■■□□ 2
PSPH-209ENST00000427797 CUX1P39880 1505 aa27.53■■■□□ 2
PSPH-209ENST00000427797 TOPBP1Q92547 1522 aa27.51■■□□□ 1.99
PSPH-209ENST00000427797 WDR62O43379 1518 aa27.49■■□□□ 1.99
PSPH-209ENST00000427797 DNMBPQ6XZF7 1577 aa27.48■■□□□ 1.99
PSPH-209ENST00000427797 CHIC1Q5VXU3 224 aa27.46■■□□□ 1.99
PSPH-209ENST00000427797 SYNJ1O43426 1573 aa27.46■■□□□ 1.99
PSPH-209ENST00000427797 TOP2BQ02880 1626 aa27.39■■□□□ 1.98
PSPH-209ENST00000427797 TRIM41Q8WV44 630 aa27.38■■□□□ 1.97
PSPH-209ENST00000427797 BIVM-ERCC5R4GMW8 1640 aa27.34■■□□□ 1.97
PSPH-209ENST00000427797 FGD5Q6ZNL6 1462 aa27.34■■□□□ 1.97
PSPH-209ENST00000427797 POLA1P09884 1462 aaPredicted RBP27.32■■□□□ 1.96
PSPH-209ENST00000427797 CUX2O14529 1486 aa27.29■■□□□ 1.96
PSPH-209ENST00000427797 RAD54L2Q9Y4B4 1467 aa27.25■■□□□ 1.95
PSPH-209ENST00000427797 SOGA1O94964 1423 aa27.25■■□□□ 1.95
PSPH-209ENST00000427797 IFT140Q96RY7 1462 aa27.19■■□□□ 1.94
PSPH-209ENST00000427797 TARBP1Q13395 1621 aaKnown RBP27.12■■□□□ 1.93
PSPH-209ENST00000427797 ABCA10Q8WWZ4 1543 aa27.09■■□□□ 1.93
PSPH-209ENST00000427797 ZNF608Q9ULD9 1512 aaPredicted RBP27.07■■□□□ 1.92
PSPH-209ENST00000427797 TDRD9Q8NDG6 1382 aaKnown RBP27.07■■□□□ 1.92
PSPH-209ENST00000427797 AQRO60306 1485 aaKnown RBP eCLIP27.01■■□□□ 1.912e-7■■■■■ 29
PSPH-209ENST00000427797 WDR97A6NE52 1622 aa26.98■■□□□ 1.91
PSPH-209ENST00000427797 RUSC2Q8N2Y8 1516 aa26.95■■□□□ 1.91
PSPH-209ENST00000427797 KIF27Q86VH2 1401 aa26.94■■□□□ 1.9
PSPH-209ENST00000427797 GAPVD1Q14C86 1478 aa26.92■■□□□ 1.9
PSPH-209ENST00000427797 EIF4G3O43432 1585 aaKnown RBP26.88■■□□□ 1.89
PSPH-209ENST00000427797 ABCA5Q8WWZ7 1642 aa26.88■■□□□ 1.89
PSPH-209ENST00000427797 FAM9AQ8IZU1 332 aaPredicted RBP26.87■■□□□ 1.89
PSPH-209ENST00000427797 IGF1RP08069 1367 aa26.83■■□□□ 1.88
PSPH-209ENST00000427797 GRIN2BQ13224 1484 aa26.82■■□□□ 1.88
PSPH-209ENST00000427797 EEA1Q15075 1411 aa26.77■■□□□ 1.88
PSPH-209ENST00000427797 CSRNP3Q8WYN3 585 aa26.76■■□□□ 1.87
PSPH-209ENST00000427797 ERICH3Q5RHP9 1530 aa26.74■■□□□ 1.87
PSPH-209ENST00000427797 SNAPC4Q5SXM2 1469 aa26.73■■□□□ 1.87
PSPH-209ENST00000427797 PBRM1Q86U86 1689 aa26.72■■□□□ 1.87
PSPH-209ENST00000427797 CARMIL1Q5VZK9 1371 aa26.66■■□□□ 1.86
PSPH-209ENST00000427797 MAGI1Q96QZ7 1491 aaPredicted RBP26.66■■□□□ 1.86
PSPH-209ENST00000427797 FHAD1B1AJZ9 1412 aa26.63■■□□□ 1.85
PSPH-209ENST00000427797 ADAMTS12P58397 1594 aa26.6■■□□□ 1.85
PSPH-209ENST00000427797 FBLN2P98095 1184 aa26.6■■□□□ 1.85
PSPH-209ENST00000427797 CHMP7Q8WUX9 453 aaPredicted RBP26.59■■□□□ 1.85
PSPH-209ENST00000427797 PRXQ9BXM0 1461 aa26.58■■□□□ 1.85
PSPH-209ENST00000427797 SYNJ2O15056 1496 aa26.57■■□□□ 1.84
PSPH-209ENST00000427797 CUL7Q14999 1698 aa26.56■■□□□ 1.84
PSPH-209ENST00000427797 EHMT2Q96KQ7 1210 aa26.52■■□□□ 1.84
PSPH-209ENST00000427797 RAPGEF2Q9Y4G8 1499 aa26.52■■□□□ 1.84
PSPH-209ENST00000427797 GRIN2AQ12879 1464 aa26.47■■□□□ 1.83
PSPH-209ENST00000427797 KIF21BO75037 1637 aa26.43■■□□□ 1.82
PSPH-209ENST00000427797 CHD1O14646 1710 aa26.42■■□□□ 1.82
PSPH-209ENST00000427797 LOC105371045A0A1W2PR82 267 aa26.4■■□□□ 1.82
PSPH-209ENST00000427797 GOLGA3Q08378 1498 aa26.36■■□□□ 1.81
PSPH-209ENST00000427797 OSCARQ8IYS5 282 aa26.36■■□□□ 1.81
PSPH-209ENST00000427797 NUP160Q12769 1436 aa26.34■■□□□ 1.81
PSPH-209ENST00000427797 UBTFP17480 764 aaKnown RBP26.34■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms