RNA–Protein interactions for RNA: ENST00000427678.1

KDM3A-204, Transcript of lysine demethylase 3A, humanhuman

TSL 2

Gene KDM3A, Length 565 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-204ENST00000427678 NISCHQ9Y2I1 1504 aa35.77■■■■□ 3.32
KDM3A-204ENST00000427678 CCDC180Q9P1Z9 1646 aa31.62■■■□□ 2.65
KDM3A-204ENST00000427678 ABCC9O60706 1549 aa31.02■■■□□ 2.56
KDM3A-204ENST00000427678 DCAF8L2P0C7V8 631 aa30.08■■■□□ 2.41
KDM3A-204ENST00000427678 NACADO15069 1562 aa29.83■■■□□ 2.37
KDM3A-204ENST00000427678 RB1CC1Q8TDY2 1594 aa29.82■■■□□ 2.36
KDM3A-204ENST00000427678 ZCCHC6Q5VYS8 1495 aaKnown RBP29.77■■■□□ 2.36
KDM3A-204ENST00000427678 MYO15BQ96JP2 1530 aa29.69■■■□□ 2.34
KDM3A-204ENST00000427678 DCAF1Q9Y4B6 1507 aa29.58■■■□□ 2.33
KDM3A-204ENST00000427678 PABPN1Q86U42 306 aaKnown RBP eCLIP29.11■■■□□ 2.25
KDM3A-204ENST00000427678 UNC13AQ9UPW8 1703 aa28.94■■■□□ 2.22
KDM3A-204ENST00000427678 SCRIBQ14160 1630 aa28.92■■■□□ 2.22
KDM3A-204ENST00000427678 BICRAQ9NZM4 1560 aa28.87■■■□□ 2.21
KDM3A-204ENST00000427678 SHROOM4Q9ULL8 1493 aa28.63■■■□□ 2.17
KDM3A-204ENST00000427678 DNAJC5BQ9UF47 199 aa28.47■■■□□ 2.15
KDM3A-204ENST00000427678 EIF4G1Q04637 1599 aaKnown RBP28.13■■■□□ 2.09
KDM3A-204ENST00000427678 CC2D2AQ9P2K1 1620 aa27.99■■■□□ 2.07
KDM3A-204ENST00000427678 CECR2Q9BXF3 1484 aa27.88■■■□□ 2.05
KDM3A-204ENST00000427678 BAZ1AQ9NRL2 1556 aaPredicted RBP27.7■■■□□ 2.03
KDM3A-204ENST00000427678 SMARCA4P51532 1647 aa27.67■■■□□ 2.02
KDM3A-204ENST00000427678 NCAPD3P42695 1498 aa27.59■■■□□ 2.01
KDM3A-204ENST00000427678 ATAD2BQ9ULI0 1458 aa27.59■■■□□ 2.01
KDM3A-204ENST00000427678 MROH2BQ7Z745 1585 aa27.56■■■□□ 2
KDM3A-204ENST00000427678 SMARCA2P51531 1590 aa27.53■■■□□ 2
KDM3A-204ENST00000427678 PEG3Q9GZU2 1588 aa27.4■■□□□ 1.98
KDM3A-204ENST00000427678 BAZ1BQ9UIG0 1483 aaKnown RBP27.37■■□□□ 1.97
KDM3A-204ENST00000427678 HMGXB3Q12766 1538 aa27.36■■□□□ 1.97
KDM3A-204ENST00000427678 RSF1Q96T23 1441 aaPredicted RBP27.34■■□□□ 1.97
KDM3A-204ENST00000427678 WIZO95785 1651 aa27.2■■□□□ 1.94
KDM3A-204ENST00000427678 TOP2AP11388 1531 aaKnown RBP26.95■■□□□ 1.9
KDM3A-204ENST00000427678 NESP48681 1621 aa26.84■■□□□ 1.89
KDM3A-204ENST00000427678 SUPT5HO00267 1087 aaKnown RBP26.83■■□□□ 1.89
KDM3A-204ENST00000427678 CADPSQ9ULU8 1353 aa26.83■■□□□ 1.88
KDM3A-204ENST00000427678 ERCC6Q03468 1493 aa26.76■■□□□ 1.87
KDM3A-204ENST00000427678 LAMC3Q9Y6N6 1575 aa26.75■■□□□ 1.87
KDM3A-204ENST00000427678 CCDC88BA6NC98 1476 aa26.71■■□□□ 1.87
KDM3A-204ENST00000427678 PDS5BQ9NTI5 1447 aa26.7■■□□□ 1.86
KDM3A-204ENST00000427678 CFTRP13569 1480 aa26.63■■□□□ 1.85
KDM3A-204ENST00000427678 FANCD2Q9BXW9 1451 aa26.46■■□□□ 1.83
KDM3A-204ENST00000427678 CUX2O14529 1486 aa26.4■■□□□ 1.82
KDM3A-204ENST00000427678 CEP164Q9UPV0 1460 aa26.4■■□□□ 1.82
KDM3A-204ENST00000427678 KIF21AQ7Z4S6 1674 aa26.38■■□□□ 1.81
KDM3A-204ENST00000427678 MRC2Q9UBG0 1479 aa26.35■■□□□ 1.81
KDM3A-204ENST00000427678 THOC2Q8NI27 1593 aaKnown RBP26.3■■□□□ 1.8
KDM3A-204ENST00000427678 WDR62O43379 1518 aa26.2■■□□□ 1.79
KDM3A-204ENST00000427678 PRDM2Q13029 1718 aa26.17■■□□□ 1.78
KDM3A-204ENST00000427678 URB2Q14146 1524 aaKnown RBP26.14■■□□□ 1.78
KDM3A-204ENST00000427678 ABCC8Q09428 1581 aa26.08■■□□□ 1.77
KDM3A-204ENST00000427678 TOPBP1Q92547 1522 aa26.02■■□□□ 1.76
KDM3A-204ENST00000427678 DNMBPQ6XZF7 1577 aa25.95■■□□□ 1.75
KDM3A-204ENST00000427678 IFT140Q96RY7 1462 aa25.87■■□□□ 1.73
KDM3A-204ENST00000427678 CUX1P39880 1505 aa25.83■■□□□ 1.73
KDM3A-204ENST00000427678 POLA1P09884 1462 aaPredicted RBP25.8■■□□□ 1.72
KDM3A-204ENST00000427678 SOGA1O94964 1423 aa25.8■■□□□ 1.72
KDM3A-204ENST00000427678 WRNQ14191 1432 aaPredicted RBP eCLIP25.79■■□□□ 1.72
KDM3A-204ENST00000427678 FGD5Q6ZNL6 1462 aa25.76■■□□□ 1.71
KDM3A-204ENST00000427678 ZNF608Q9ULD9 1512 aaPredicted RBP25.72■■□□□ 1.71
KDM3A-204ENST00000427678 RAD54L2Q9Y4B4 1467 aa25.72■■□□□ 1.71
KDM3A-204ENST00000427678 TARBP1Q13395 1621 aaKnown RBP25.66■■□□□ 1.7
KDM3A-204ENST00000427678 TDRD9Q8NDG6 1382 aaKnown RBP25.65■■□□□ 1.7
KDM3A-204ENST00000427678 AQRO60306 1485 aaKnown RBP eCLIP25.64■■□□□ 1.696e-8■■■□□ 17.1
KDM3A-204ENST00000427678 DNAJC5Q9H3Z4 198 aa25.63■■□□□ 1.69
KDM3A-204ENST00000427678 TOP2BQ02880 1626 aa25.61■■□□□ 1.69
KDM3A-204ENST00000427678 SYNJ1O43426 1573 aa25.59■■□□□ 1.69
KDM3A-204ENST00000427678 BIVM-ERCC5R4GMW8 1640 aa25.55■■□□□ 1.68
KDM3A-204ENST00000427678 ABCA10Q8WWZ4 1543 aa25.52■■□□□ 1.68
KDM3A-204ENST00000427678 EIF4G3O43432 1585 aaKnown RBP25.52■■□□□ 1.68
KDM3A-204ENST00000427678 OSCARQ8IYS5 282 aa25.5■■□□□ 1.67
KDM3A-204ENST00000427678 WDR97A6NE52 1622 aa25.47■■□□□ 1.67
KDM3A-204ENST00000427678 GAPVD1Q14C86 1478 aa25.45■■□□□ 1.66
KDM3A-204ENST00000427678 GRIN2BQ13224 1484 aa25.43■■□□□ 1.66
KDM3A-204ENST00000427678 FBLN2P98095 1184 aa25.42■■□□□ 1.66
KDM3A-204ENST00000427678 CHMP7Q8WUX9 453 aaPredicted RBP25.37■■□□□ 1.65
KDM3A-204ENST00000427678 TRIM41Q8WV44 630 aa25.37■■□□□ 1.65
KDM3A-204ENST00000427678 SNAPC4Q5SXM2 1469 aa25.34■■□□□ 1.65
KDM3A-204ENST00000427678 MAGI1Q96QZ7 1491 aaPredicted RBP25.33■■□□□ 1.65
KDM3A-204ENST00000427678 ABCA5Q8WWZ7 1642 aa25.3■■□□□ 1.64
KDM3A-204ENST00000427678 KIF27Q86VH2 1401 aa25.27■■□□□ 1.64
KDM3A-204ENST00000427678 SYNJ2O15056 1496 aa25.25■■□□□ 1.63
KDM3A-204ENST00000427678 ERICH3Q5RHP9 1530 aa25.2■■□□□ 1.62
KDM3A-204ENST00000427678 PBRM1Q86U86 1689 aa25.19■■□□□ 1.62
KDM3A-204ENST00000427678 IGF1RP08069 1367 aa25.18■■□□□ 1.62
KDM3A-204ENST00000427678 FHAD1B1AJZ9 1412 aa25.18■■□□□ 1.62
KDM3A-204ENST00000427678 CHD1O14646 1710 aa25.13■■□□□ 1.61
KDM3A-204ENST00000427678 CHIC1Q5VXU3 224 aa25.08■■□□□ 1.61
KDM3A-204ENST00000427678 ADAMTS12P58397 1594 aa25.07■■□□□ 1.6
KDM3A-204ENST00000427678 GRIN2AQ12879 1464 aa25.07■■□□□ 1.6
KDM3A-204ENST00000427678 CARMIL1Q5VZK9 1371 aa25.03■■□□□ 1.6
KDM3A-204ENST00000427678 RUSC2Q8N2Y8 1516 aa25■■□□□ 1.59
KDM3A-204ENST00000427678 NUP160Q12769 1436 aa24.97■■□□□ 1.59
KDM3A-204ENST00000427678 CLASP1Q7Z460 1538 aa24.94■■□□□ 1.58
KDM3A-204ENST00000427678 CUL7Q14999 1698 aa24.92■■□□□ 1.58
KDM3A-204ENST00000427678 CSRNP3Q8WYN3 585 aa24.89■■□□□ 1.58
KDM3A-204ENST00000427678 ARHGEF11O15085 1522 aa24.89■■□□□ 1.57
KDM3A-204ENST00000427678 CEP170Q5SW79 1584 aa24.88■■□□□ 1.57
KDM3A-204ENST00000427678 JPH4Q96JJ6 628 aa24.85■■□□□ 1.57
KDM3A-204ENST00000427678 CYB5RLQ6IPT4 315 aa24.84■■□□□ 1.57
KDM3A-204ENST00000427678 RAPGEF2Q9Y4G8 1499 aa24.83■■□□□ 1.57
KDM3A-204ENST00000427678 RIMBP3CA6NJZ7 1639 aa24.83■■□□□ 1.56
KDM3A-204ENST00000427678 RIMBP3BA6NNM3 1639 aa24.83■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms