RNA–Protein interactions for RNA: ENST00000427473.2

CTLA4-203, Transcript of cytotoxic T-lymphocyte associated protein 4, humanhuman

TSL 5 BASIC

Gene CTLA4, Length 969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4-203ENST00000427473 NISCHQ9Y2I1 1504 aa31.24■■■□□ 2.59
CTLA4-203ENST00000427473 AEBP2Q6ZN18 517 aaPredicted RBP28.29■■■□□ 2.12
CTLA4-203ENST00000427473 CHIC1Q5VXU3 224 aa27.79■■■□□ 2.04
CTLA4-203ENST00000427473 CCDC180Q9P1Z9 1646 aa27.74■■■□□ 2.03
CTLA4-203ENST00000427473 ABCC9O60706 1549 aa26.92■■□□□ 1.9
CTLA4-203ENST00000427473 ZCCHC6Q5VYS8 1495 aaKnown RBP26.1■■□□□ 1.77
CTLA4-203ENST00000427473 NACADO15069 1562 aa26.02■■□□□ 1.76
CTLA4-203ENST00000427473 RB1CC1Q8TDY2 1594 aa26■■□□□ 1.75
CTLA4-203ENST00000427473 MYO15BQ96JP2 1530 aa25.94■■□□□ 1.74
CTLA4-203ENST00000427473 DCAF1Q9Y4B6 1507 aa25.88■■□□□ 1.73
CTLA4-203ENST00000427473 DCAF8L2P0C7V8 631 aa25.87■■□□□ 1.73
CTLA4-203ENST00000427473 UNC13AQ9UPW8 1703 aa25.39■■□□□ 1.65
CTLA4-203ENST00000427473 SCRIBQ14160 1630 aa25.28■■□□□ 1.64
CTLA4-203ENST00000427473 BICRAQ9NZM4 1560 aa25.22■■□□□ 1.63
CTLA4-203ENST00000427473 PABPN1Q86U42 306 aaKnown RBP eCLIP25.12■■□□□ 1.61
CTLA4-203ENST00000427473 SHROOM4Q9ULL8 1493 aa25.02■■□□□ 1.6
CTLA4-203ENST00000427473 EIF4G1Q04637 1599 aaKnown RBP24.54■■□□□ 1.52
CTLA4-203ENST00000427473 DNAJC5BQ9UF47 199 aa24.51■■□□□ 1.51
CTLA4-203ENST00000427473 PHF23Q9BUL5 403 aaPredicted RBP24.39■■□□□ 1.49
CTLA4-203ENST00000427473 CC2D2AQ9P2K1 1620 aa24.39■■□□□ 1.49
CTLA4-203ENST00000427473 CECR2Q9BXF3 1484 aa24.29■■□□□ 1.48
CTLA4-203ENST00000427473 SMARCA4P51532 1647 aa24.21■■□□□ 1.47
CTLA4-203ENST00000427473 BAZ1AQ9NRL2 1556 aaPredicted RBP24.2■■□□□ 1.47
CTLA4-203ENST00000427473 SENP3Q9H4L4 574 aaPredicted RBP24.11■■□□□ 1.45
CTLA4-203ENST00000427473 MROH2BQ7Z745 1585 aa24.07■■□□□ 1.44
CTLA4-203ENST00000427473 ATAD2BQ9ULI0 1458 aa24.03■■□□□ 1.44
CTLA4-203ENST00000427473 SMARCA2P51531 1590 aa24.02■■□□□ 1.44
CTLA4-203ENST00000427473 PEG3Q9GZU2 1588 aa24■■□□□ 1.43
CTLA4-203ENST00000427473 NCAPD3P42695 1498 aa23.99■■□□□ 1.43
CTLA4-203ENST00000427473 HMGXB3Q12766 1538 aa23.93■■□□□ 1.42
CTLA4-203ENST00000427473 BAZ1BQ9UIG0 1483 aaKnown RBP23.84■■□□□ 1.41
CTLA4-203ENST00000427473 RSF1Q96T23 1441 aaPredicted RBP23.84■■□□□ 1.41
CTLA4-203ENST00000427473 WIZO95785 1651 aa23.8■■□□□ 1.4
CTLA4-203ENST00000427473 TOP2AP11388 1531 aaKnown RBP23.61■■□□□ 1.37
CTLA4-203ENST00000427473 LAMC3Q9Y6N6 1575 aa23.35■■□□□ 1.33
CTLA4-203ENST00000427473 NESP48681 1621 aa23.34■■□□□ 1.33
CTLA4-203ENST00000427473 CCDC88BA6NC98 1476 aa23.28■■□□□ 1.32
CTLA4-203ENST00000427473 CADPSQ9ULU8 1353 aa23.27■■□□□ 1.32
CTLA4-203ENST00000427473 SUPT5HO00267 1087 aaKnown RBP23.24■■□□□ 1.31
CTLA4-203ENST00000427473 CFTRP13569 1480 aa23.2■■□□□ 1.3
CTLA4-203ENST00000427473 ERCC6Q03468 1493 aa23.19■■□□□ 1.3
CTLA4-203ENST00000427473 PDS5BQ9NTI5 1447 aa23.15■■□□□ 1.3
CTLA4-203ENST00000427473 KIF21AQ7Z4S6 1674 aa23.09■■□□□ 1.29
CTLA4-203ENST00000427473 PRDM2Q13029 1718 aa23.05■■□□□ 1.28
CTLA4-203ENST00000427473 THOC2Q8NI27 1593 aaKnown RBP23.03■■□□□ 1.28
CTLA4-203ENST00000427473 FANCD2Q9BXW9 1451 aa23.03■■□□□ 1.28
CTLA4-203ENST00000427473 CEP164Q9UPV0 1460 aa23■■□□□ 1.27
CTLA4-203ENST00000427473 MRC2Q9UBG0 1479 aa22.94■■□□□ 1.26
CTLA4-203ENST00000427473 CUX2O14529 1486 aa22.93■■□□□ 1.26
CTLA4-203ENST00000427473 WDR62O43379 1518 aa22.88■■□□□ 1.25
CTLA4-203ENST00000427473 URB2Q14146 1524 aaKnown RBP22.8■■□□□ 1.24
CTLA4-203ENST00000427473 DNMBPQ6XZF7 1577 aa22.69■■□□□ 1.22
CTLA4-203ENST00000427473 ABCC8Q09428 1581 aa22.68■■□□□ 1.22
CTLA4-203ENST00000427473 TOPBP1Q92547 1522 aa22.68■■□□□ 1.22
CTLA4-203ENST00000427473 PLPPR3Q6T4P5 718 aa22.66■■□□□ 1.22
CTLA4-203ENST00000427473 CUX1P39880 1505 aa22.57■■□□□ 1.2
CTLA4-203ENST00000427473 POLA1P09884 1462 aaPredicted RBP22.51■■□□□ 1.19
CTLA4-203ENST00000427473 IFT140Q96RY7 1462 aa22.51■■□□□ 1.19
CTLA4-203ENST00000427473 FGD5Q6ZNL6 1462 aa22.47■■□□□ 1.19
CTLA4-203ENST00000427473 WRNQ14191 1432 aaPredicted RBP eCLIP22.47■■□□□ 1.19
CTLA4-203ENST00000427473 BIVM-ERCC5R4GMW8 1640 aa22.45■■□□□ 1.18
CTLA4-203ENST00000427473 TOP2BQ02880 1626 aa22.43■■□□□ 1.18
CTLA4-203ENST00000427473 TARBP1Q13395 1621 aaKnown RBP22.43■■□□□ 1.18
CTLA4-203ENST00000427473 SYNJ1O43426 1573 aa22.43■■□□□ 1.18
CTLA4-203ENST00000427473 RAD54L2Q9Y4B4 1467 aa22.38■■□□□ 1.17
CTLA4-203ENST00000427473 ZNF608Q9ULD9 1512 aaPredicted RBP22.37■■□□□ 1.17
CTLA4-203ENST00000427473 SOGA1O94964 1423 aa22.37■■□□□ 1.17
CTLA4-203ENST00000427473 EIF4G3O43432 1585 aaKnown RBP22.34■■□□□ 1.17
CTLA4-203ENST00000427473 WDR97A6NE52 1622 aa22.33■■□□□ 1.17
CTLA4-203ENST00000427473 FOXD1Q16676 465 aa22.29■■□□□ 1.16
CTLA4-203ENST00000427473 ABCA10Q8WWZ4 1543 aa22.27■■□□□ 1.16
CTLA4-203ENST00000427473 AQRO60306 1485 aaKnown RBP eCLIP22.24■■□□□ 1.15
CTLA4-203ENST00000427473 TDRD9Q8NDG6 1382 aaKnown RBP22.21■■□□□ 1.15
CTLA4-203ENST00000427473 ABCA5Q8WWZ7 1642 aa22.2■■□□□ 1.14
CTLA4-203ENST00000427473 GAPVD1Q14C86 1478 aa22.14■■□□□ 1.13
CTLA4-203ENST00000427473 GRIN2BQ13224 1484 aa22.13■■□□□ 1.13
CTLA4-203ENST00000427473 PBRM1Q86U86 1689 aa22.11■■□□□ 1.13
CTLA4-203ENST00000427473 SNAPC4Q5SXM2 1469 aa22.09■■□□□ 1.13
CTLA4-203ENST00000427473 MAGI1Q96QZ7 1491 aaPredicted RBP22.07■■□□□ 1.12
CTLA4-203ENST00000427473 ERICH3Q5RHP9 1530 aa22.01■■□□□ 1.11
CTLA4-203ENST00000427473 CHD1O14646 1710 aa21.99■■□□□ 1.11
CTLA4-203ENST00000427473 KIF27Q86VH2 1401 aa21.98■■□□□ 1.11
CTLA4-203ENST00000427473 ADAMTS12P58397 1594 aa21.98■■□□□ 1.11
CTLA4-203ENST00000427473 SYNJ2O15056 1496 aa21.97■■□□□ 1.11
CTLA4-203ENST00000427473 TRIM41Q8WV44 630 aa21.96■■□□□ 1.11
CTLA4-203ENST00000427473 DNAJC5Q9H3Z4 198 aa21.95■■□□□ 1.1
CTLA4-203ENST00000427473 OSCARQ8IYS5 282 aa21.91■■□□□ 1.1
CTLA4-203ENST00000427473 FHAD1B1AJZ9 1412 aa21.9■■□□□ 1.1
CTLA4-203ENST00000427473 FBLN2P98095 1184 aa21.88■■□□□ 1.09
CTLA4-203ENST00000427473 CHMP7Q8WUX9 453 aaPredicted RBP21.87■■□□□ 1.09
CTLA4-203ENST00000427473 CUL7Q14999 1698 aa21.85■■□□□ 1.09
CTLA4-203ENST00000427473 GRIN2AQ12879 1464 aa21.85■■□□□ 1.09
CTLA4-203ENST00000427473 IGF1RP08069 1367 aa21.85■■□□□ 1.09
CTLA4-203ENST00000427473 RUSC2Q8N2Y8 1516 aa21.81■■□□□ 1.08
CTLA4-203ENST00000427473 CLASP1Q7Z460 1538 aa21.8■■□□□ 1.08
CTLA4-203ENST00000427473 NUP160Q12769 1436 aa21.76■■□□□ 1.07
CTLA4-203ENST00000427473 CEP170Q5SW79 1584 aa21.74■■□□□ 1.07
CTLA4-203ENST00000427473 CARMIL1Q5VZK9 1371 aa21.73■■□□□ 1.07
CTLA4-203ENST00000427473 EEA1Q15075 1411 aa21.69■■□□□ 1.06
CTLA4-203ENST00000427473 ARHGEF11O15085 1522 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms