RNA–Protein interactions for RNA: ENST00000427239.5

COL11A1-204, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 5

Gene COL11A1, Length 1,709 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-204ENST00000427239 NISCHQ9Y2I1 1504 aa36.32■■■■□ 3.4
COL11A1-204ENST00000427239 CCDC180Q9P1Z9 1646 aa31.99■■■□□ 2.71
COL11A1-204ENST00000427239 ABCC9O60706 1549 aa30.84■■■□□ 2.53
COL11A1-204ENST00000427239 ZCCHC6Q5VYS8 1495 aaKnown RBP30.34■■■□□ 2.45
COL11A1-204ENST00000427239 DCAF8L2P0C7V8 631 aa30.22■■■□□ 2.43
COL11A1-204ENST00000427239 DCAF1Q9Y4B6 1507 aa30.09■■■□□ 2.41
COL11A1-204ENST00000427239 MYO15BQ96JP2 1530 aa30.05■■■□□ 2.4
COL11A1-204ENST00000427239 NACADO15069 1562 aa30.02■■■□□ 2.4
COL11A1-204ENST00000427239 RB1CC1Q8TDY2 1594 aa29.91■■■□□ 2.38
COL11A1-204ENST00000427239 SCRIBQ14160 1630 aa29.22■■■□□ 2.27
COL11A1-204ENST00000427239 UNC13AQ9UPW8 1703 aa29.12■■■□□ 2.25
COL11A1-204ENST00000427239 SHROOM4Q9ULL8 1493 aa28.99■■■□□ 2.23
COL11A1-204ENST00000427239 PABPN1Q86U42 306 aaKnown RBP eCLIP28.96■■■□□ 2.23
COL11A1-204ENST00000427239 BICRAQ9NZM4 1560 aa28.94■■■□□ 2.22
COL11A1-204ENST00000427239 CECR2Q9BXF3 1484 aa28.21■■■□□ 2.11
COL11A1-204ENST00000427239 EIF4G1Q04637 1599 aaKnown RBP28.16■■■□□ 2.1
COL11A1-204ENST00000427239 BAZ1AQ9NRL2 1556 aaPredicted RBP28.12■■■□□ 2.09
COL11A1-204ENST00000427239 SMARCA4P51532 1647 aa28.02■■■□□ 2.08
COL11A1-204ENST00000427239 MROH2BQ7Z745 1585 aa27.97■■■□□ 2.07
COL11A1-204ENST00000427239 CC2D2AQ9P2K1 1620 aa27.9■■■□□ 2.06
COL11A1-204ENST00000427239 RSF1Q96T23 1441 aaPredicted RBP27.89■■■□□ 2.05
COL11A1-204ENST00000427239 DNAJC5BQ9UF47 199 aa27.87■■■□□ 2.05
COL11A1-204ENST00000427239 ATAD2BQ9ULI0 1458 aa27.79■■■□□ 2.04
COL11A1-204ENST00000427239 SMARCA2P51531 1590 aa27.78■■■□□ 2.04
COL11A1-204ENST00000427239 PEG3Q9GZU2 1588 aa27.78■■■□□ 2.04
COL11A1-204ENST00000427239 NCAPD3P42695 1498 aa27.73■■■□□ 2.03
COL11A1-204ENST00000427239 WIZO95785 1651 aa27.66■■■□□ 2.02
COL11A1-204ENST00000427239 SUPT5HO00267 1087 aaKnown RBP27.62■■■□□ 2.01
COL11A1-204ENST00000427239 BAZ1BQ9UIG0 1483 aaKnown RBP27.59■■■□□ 2.01
COL11A1-204ENST00000427239 HMGXB3Q12766 1538 aa27.59■■■□□ 2.01
COL11A1-204ENST00000427239 TOP2AP11388 1531 aaKnown RBP27.43■■□□□ 1.98
COL11A1-204ENST00000427239 CCDC88BA6NC98 1476 aa27.15■■□□□ 1.94
COL11A1-204ENST00000427239 CADPSQ9ULU8 1353 aa26.96■■□□□ 1.91
COL11A1-204ENST00000427239 CFTRP13569 1480 aa26.89■■□□□ 1.89
COL11A1-204ENST00000427239 LAMC3Q9Y6N6 1575 aa26.87■■□□□ 1.89
COL11A1-204ENST00000427239 NESP48681 1621 aa26.83■■□□□ 1.89
COL11A1-204ENST00000427239 PDS5BQ9NTI5 1447 aa26.73■■□□□ 1.87
COL11A1-204ENST00000427239 FANCD2Q9BXW9 1451 aa26.61■■□□□ 1.85
COL11A1-204ENST00000427239 PRDM2Q13029 1718 aa26.59■■□□□ 1.85
COL11A1-204ENST00000427239 ERCC6Q03468 1493 aa26.57■■□□□ 1.84
COL11A1-204ENST00000427239 CEP164Q9UPV0 1460 aa26.51■■□□□ 1.84
COL11A1-204ENST00000427239 KIF21AQ7Z4S6 1674 aa26.47■■□□□ 1.83
COL11A1-204ENST00000427239 MRC2Q9UBG0 1479 aa26.36■■□□□ 1.81
COL11A1-204ENST00000427239 ABCC8Q09428 1581 aa26.32■■□□□ 1.8
COL11A1-204ENST00000427239 WRNQ14191 1432 aaPredicted RBP eCLIP26.29■■□□□ 1.8
COL11A1-204ENST00000427239 URB2Q14146 1524 aaKnown RBP26.28■■□□□ 1.8
COL11A1-204ENST00000427239 THOC2Q8NI27 1593 aaKnown RBP26.27■■□□□ 1.8
COL11A1-204ENST00000427239 WDR62O43379 1518 aa26.23■■□□□ 1.79
COL11A1-204ENST00000427239 TOPBP1Q92547 1522 aa26.23■■□□□ 1.79
COL11A1-204ENST00000427239 DNMBPQ6XZF7 1577 aa26.23■■□□□ 1.79
COL11A1-204ENST00000427239 CUX1P39880 1505 aa26.2■■□□□ 1.78
COL11A1-204ENST00000427239 TOP2BQ02880 1626 aa26.13■■□□□ 1.77
COL11A1-204ENST00000427239 SYNJ1O43426 1573 aa26.11■■□□□ 1.77
COL11A1-204ENST00000427239 TRIM41Q8WV44 630 aa26.11■■□□□ 1.77
COL11A1-204ENST00000427239 CUX2O14529 1486 aa26.1■■□□□ 1.77
COL11A1-204ENST00000427239 CHIC1Q5VXU3 224 aa26.1■■□□□ 1.77
COL11A1-204ENST00000427239 BIVM-ERCC5R4GMW8 1640 aa26.09■■□□□ 1.77
COL11A1-204ENST00000427239 POLA1P09884 1462 aaPredicted RBP26.04■■□□□ 1.76
COL11A1-204ENST00000427239 FGD5Q6ZNL6 1462 aa26.04■■□□□ 1.76
COL11A1-204ENST00000427239 SOGA1O94964 1423 aa26■■□□□ 1.75
COL11A1-204ENST00000427239 IFT140Q96RY7 1462 aa25.96■■□□□ 1.75
COL11A1-204ENST00000427239 RAD54L2Q9Y4B4 1467 aa25.91■■□□□ 1.74
COL11A1-204ENST00000427239 TARBP1Q13395 1621 aaKnown RBP25.87■■□□□ 1.73
COL11A1-204ENST00000427239 ABCA10Q8WWZ4 1543 aa25.84■■□□□ 1.73
COL11A1-204ENST00000427239 TDRD9Q8NDG6 1382 aaKnown RBP25.77■■□□□ 1.72
COL11A1-204ENST00000427239 ZNF608Q9ULD9 1512 aaPredicted RBP25.76■■□□□ 1.71
COL11A1-204ENST00000427239 WDR97A6NE52 1622 aa25.73■■□□□ 1.71
COL11A1-204ENST00000427239 KIF27Q86VH2 1401 aa25.72■■□□□ 1.71
COL11A1-204ENST00000427239 AQRO60306 1485 aaKnown RBP eCLIP25.72■■□□□ 1.71
COL11A1-204ENST00000427239 GAPVD1Q14C86 1478 aa25.68■■□□□ 1.7
COL11A1-204ENST00000427239 EIF4G3O43432 1585 aaKnown RBP25.64■■□□□ 1.69
COL11A1-204ENST00000427239 ABCA5Q8WWZ7 1642 aa25.63■■□□□ 1.69
COL11A1-204ENST00000427239 GRIN2BQ13224 1484 aa25.61■■□□□ 1.69
COL11A1-204ENST00000427239 EEA1Q15075 1411 aa25.59■■□□□ 1.69
COL11A1-204ENST00000427239 RUSC2Q8N2Y8 1516 aa25.58■■□□□ 1.69
COL11A1-204ENST00000427239 IGF1RP08069 1367 aa25.56■■□□□ 1.68
COL11A1-204ENST00000427239 ERICH3Q5RHP9 1530 aa25.55■■□□□ 1.68
COL11A1-204ENST00000427239 CSRNP3Q8WYN3 585 aa25.51■■□□□ 1.68
COL11A1-204ENST00000427239 FAM9AQ8IZU1 332 aaPredicted RBP25.49■■□□□ 1.67
COL11A1-204ENST00000427239 PBRM1Q86U86 1689 aa25.48■■□□□ 1.67
COL11A1-204ENST00000427239 MAGI1Q96QZ7 1491 aaPredicted RBP25.48■■□□□ 1.67
COL11A1-204ENST00000427239 SNAPC4Q5SXM2 1469 aa25.45■■□□□ 1.67
COL11A1-204ENST00000427239 CARMIL1Q5VZK9 1371 aa25.42■■□□□ 1.66
COL11A1-204ENST00000427239 FHAD1B1AJZ9 1412 aa25.41■■□□□ 1.66
COL11A1-204ENST00000427239 CHMP7Q8WUX9 453 aaPredicted RBP25.39■■□□□ 1.65
COL11A1-204ENST00000427239 CUL7Q14999 1698 aa25.38■■□□□ 1.65
COL11A1-204ENST00000427239 SYNJ2O15056 1496 aa25.37■■□□□ 1.65
COL11A1-204ENST00000427239 FBLN2P98095 1184 aa25.36■■□□□ 1.65
COL11A1-204ENST00000427239 ADAMTS12P58397 1594 aa25.34■■□□□ 1.65
COL11A1-204ENST00000427239 PRXQ9BXM0 1461 aa25.33■■□□□ 1.65
COL11A1-204ENST00000427239 RAPGEF2Q9Y4G8 1499 aa25.3■■□□□ 1.64
COL11A1-204ENST00000427239 GRIN2AQ12879 1464 aa25.26■■□□□ 1.63
COL11A1-204ENST00000427239 OSCARQ8IYS5 282 aa25.21■■□□□ 1.63
COL11A1-204ENST00000427239 KIF21BO75037 1637 aa25.2■■□□□ 1.62
COL11A1-204ENST00000427239 CHD1O14646 1710 aa25.18■■□□□ 1.62
COL11A1-204ENST00000427239 NUP160Q12769 1436 aa25.13■■□□□ 1.61
COL11A1-204ENST00000427239 GOLGA3Q08378 1498 aa25.13■■□□□ 1.61
COL11A1-204ENST00000427239 UBTFP17480 764 aaKnown RBP25.09■■□□□ 1.61
COL11A1-204ENST00000427239 EHMT2Q96KQ7 1210 aa25.09■■□□□ 1.61
COL11A1-204ENST00000427239 CEP170Q5SW79 1584 aa25.06■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms