RNA–Protein interactions for RNA: ENST00000427174.5

RPUSD3-205, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 5

Gene RPUSD3, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-205ENST00000427174 NISCHQ9Y2I1 1504 aa52.15■■■■■ 5.94
RPUSD3-205ENST00000427174 CCDC180Q9P1Z9 1646 aa46.34■■■■■ 5.01
RPUSD3-205ENST00000427174 ABCC9O60706 1549 aa44.94■■■■■ 4.78
RPUSD3-205ENST00000427174 ZCCHC6Q5VYS8 1495 aaKnown RBP43.51■■■■■ 4.56
RPUSD3-205ENST00000427174 NACADO15069 1562 aa43.43■■■■■ 4.54
RPUSD3-205ENST00000427174 RB1CC1Q8TDY2 1594 aa43.4■■■■■ 4.54
RPUSD3-205ENST00000427174 MYO15BQ96JP2 1530 aa43.31■■■■■ 4.52
RPUSD3-205ENST00000427174 DCAF1Q9Y4B6 1507 aa43.22■■■■■ 4.51
RPUSD3-205ENST00000427174 DCAF8L2P0C7V8 631 aa43.21■■■■■ 4.51
RPUSD3-205ENST00000427174 UNC13AQ9UPW8 1703 aa42.6■■■■■ 4.41
RPUSD3-205ENST00000427174 SCRIBQ14160 1630 aa42.19■■■■■ 4.34
RPUSD3-205ENST00000427174 BICRAQ9NZM4 1560 aa42.17■■■■■ 4.34
RPUSD3-205ENST00000427174 PABPN1Q86U42 306 aaKnown RBP eCLIP41.97■■■■■ 4.31
RPUSD3-205ENST00000427174 SHROOM4Q9ULL8 1493 aa41.7■■■■■ 4.27
RPUSD3-205ENST00000427174 DNAJC5BQ9UF47 199 aa41.04■■■■■ 4.16
RPUSD3-205ENST00000427174 EIF4G1Q04637 1599 aaKnown RBP40.97■■■■■ 4.15
RPUSD3-205ENST00000427174 CC2D2AQ9P2K1 1620 aa40.75■■■■■ 4.11
RPUSD3-205ENST00000427174 CECR2Q9BXF3 1484 aa40.58■■■■■ 4.09
RPUSD3-205ENST00000427174 SMARCA4P51532 1647 aa40.44■■■■■ 4.06
RPUSD3-205ENST00000427174 BAZ1AQ9NRL2 1556 aaPredicted RBP40.39■■■■■ 4.06
RPUSD3-205ENST00000427174 MROH2BQ7Z745 1585 aa40.19■■■■■ 4.02
RPUSD3-205ENST00000427174 ATAD2BQ9ULI0 1458 aa40.11■■■■■ 4.01
RPUSD3-205ENST00000427174 PEG3Q9GZU2 1588 aa40.09■■■■■ 4.01
RPUSD3-205ENST00000427174 SMARCA2P51531 1590 aa40.08■■■■■ 4.01
RPUSD3-205ENST00000427174 NCAPD3P42695 1498 aa40.07■■■■■ 4
RPUSD3-205ENST00000427174 HMGXB3Q12766 1538 aa39.92■■■■□ 3.98
RPUSD3-205ENST00000427174 WIZO95785 1651 aa39.8■■■■□ 3.96
RPUSD3-205ENST00000427174 RSF1Q96T23 1441 aaPredicted RBP39.8■■■■□ 3.96
RPUSD3-205ENST00000427174 BAZ1BQ9UIG0 1483 aaKnown RBP39.75■■■■□ 3.95
RPUSD3-205ENST00000427174 TOP2AP11388 1531 aaKnown RBP39.37■■■■□ 3.89
RPUSD3-205ENST00000427174 NESP48681 1621 aa39■■■■□ 3.83
RPUSD3-205ENST00000427174 LAMC3Q9Y6N6 1575 aa38.98■■■■□ 3.83
RPUSD3-205ENST00000427174 CCDC88BA6NC98 1476 aa38.87■■■■□ 3.81
RPUSD3-205ENST00000427174 CADPSQ9ULU8 1353 aa38.85■■■■□ 3.81
RPUSD3-205ENST00000427174 SUPT5HO00267 1087 aaKnown RBP38.81■■■■□ 3.8
RPUSD3-205ENST00000427174 CFTRP13569 1480 aa38.73■■■■□ 3.79
RPUSD3-205ENST00000427174 ERCC6Q03468 1493 aa38.66■■■■□ 3.78
RPUSD3-205ENST00000427174 KIF21AQ7Z4S6 1674 aa38.65■■■■□ 3.78
RPUSD3-205ENST00000427174 PDS5BQ9NTI5 1447 aa38.62■■■■□ 3.77
RPUSD3-205ENST00000427174 PRDM2Q13029 1718 aa38.61■■■■□ 3.77
RPUSD3-205ENST00000427174 THOC2Q8NI27 1593 aaKnown RBP38.44■■■■□ 3.74
RPUSD3-205ENST00000427174 FANCD2Q9BXW9 1451 aa38.41■■■■□ 3.74
RPUSD3-205ENST00000427174 CEP164Q9UPV0 1460 aa38.34■■■■□ 3.73
RPUSD3-205ENST00000427174 CUX2O14529 1486 aa38.25■■■■□ 3.71
RPUSD3-205ENST00000427174 MRC2Q9UBG0 1479 aa38.25■■■■□ 3.71
RPUSD3-205ENST00000427174 WDR62O43379 1518 aa38.17■■■■□ 3.7
RPUSD3-205ENST00000427174 URB2Q14146 1524 aaKnown RBP38.07■■■■□ 3.68
RPUSD3-205ENST00000427174 TOPBP1Q92547 1522 aa37.87■■■■□ 3.65
RPUSD3-205ENST00000427174 DNMBPQ6XZF7 1577 aa37.86■■■■□ 3.65
RPUSD3-205ENST00000427174 ABCC8Q09428 1581 aa37.85■■■■□ 3.65
RPUSD3-205ENST00000427174 CUX1P39880 1505 aa37.7■■■■□ 3.63
RPUSD3-205ENST00000427174 POLA1P09884 1462 aaPredicted RBP37.56■■■■□ 3.6
RPUSD3-205ENST00000427174 IFT140Q96RY7 1462 aa37.53■■■■□ 3.6
RPUSD3-205ENST00000427174 TARBP1Q13395 1621 aaKnown RBP37.51■■■■□ 3.6
RPUSD3-205ENST00000427174 BIVM-ERCC5R4GMW8 1640 aa37.5■■■■□ 3.59
RPUSD3-205ENST00000427174 FGD5Q6ZNL6 1462 aa37.49■■■■□ 3.59
RPUSD3-205ENST00000427174 WRNQ14191 1432 aaPredicted RBP eCLIP37.47■■■■□ 3.59
RPUSD3-205ENST00000427174 TOP2BQ02880 1626 aa37.46■■■■□ 3.59
RPUSD3-205ENST00000427174 SYNJ1O43426 1573 aa37.46■■■■□ 3.59
RPUSD3-205ENST00000427174 ZNF608Q9ULD9 1512 aaPredicted RBP37.36■■■■□ 3.57
RPUSD3-205ENST00000427174 RAD54L2Q9Y4B4 1467 aa37.36■■■■□ 3.57
RPUSD3-205ENST00000427174 SOGA1O94964 1423 aa37.35■■■■□ 3.57
RPUSD3-205ENST00000427174 WDR97A6NE52 1622 aa37.31■■■■□ 3.56
RPUSD3-205ENST00000427174 EIF4G3O43432 1585 aaKnown RBP37.27■■■■□ 3.56
RPUSD3-205ENST00000427174 ABCA10Q8WWZ4 1543 aa37.16■■■■□ 3.54
RPUSD3-205ENST00000427174 AQRO60306 1485 aaKnown RBP eCLIP37.15■■■■□ 3.542e-7■■□□□ 14.1
RPUSD3-205ENST00000427174 TDRD9Q8NDG6 1382 aaKnown RBP37.09■■■■□ 3.53
RPUSD3-205ENST00000427174 ABCA5Q8WWZ7 1642 aa37.05■■■■□ 3.52
RPUSD3-205ENST00000427174 PBRM1Q86U86 1689 aa36.97■■■■□ 3.51
RPUSD3-205ENST00000427174 GAPVD1Q14C86 1478 aa36.94■■■■□ 3.5
RPUSD3-205ENST00000427174 GRIN2BQ13224 1484 aa36.91■■■■□ 3.5
RPUSD3-205ENST00000427174 SNAPC4Q5SXM2 1469 aa36.82■■■■□ 3.48
RPUSD3-205ENST00000427174 MAGI1Q96QZ7 1491 aaPredicted RBP36.81■■■■□ 3.48
RPUSD3-205ENST00000427174 CHD1O14646 1710 aa36.8■■■■□ 3.48
RPUSD3-205ENST00000427174 DNAJC5Q9H3Z4 198 aa36.73■■■■□ 3.47
RPUSD3-205ENST00000427174 ERICH3Q5RHP9 1530 aa36.73■■■■□ 3.47
RPUSD3-205ENST00000427174 TRIM41Q8WV44 630 aa36.66■■■■□ 3.46
RPUSD3-205ENST00000427174 SYNJ2O15056 1496 aa36.65■■■■□ 3.46
RPUSD3-205ENST00000427174 KIF27Q86VH2 1401 aa36.65■■■■□ 3.46
RPUSD3-205ENST00000427174 ADAMTS12P58397 1594 aa36.65■■■■□ 3.46
RPUSD3-205ENST00000427174 OSCARQ8IYS5 282 aa36.61■■■■□ 3.45
RPUSD3-205ENST00000427174 FHAD1B1AJZ9 1412 aa36.52■■■■□ 3.44
RPUSD3-205ENST00000427174 FBLN2P98095 1184 aa36.51■■■■□ 3.44
RPUSD3-205ENST00000427174 IGF1RP08069 1367 aa36.51■■■■□ 3.43
RPUSD3-205ENST00000427174 CHMP7Q8WUX9 453 aaPredicted RBP36.5■■■■□ 3.43
RPUSD3-205ENST00000427174 CUL7Q14999 1698 aa36.47■■■■□ 3.43
RPUSD3-205ENST00000427174 RUSC2Q8N2Y8 1516 aa36.46■■■■□ 3.43
RPUSD3-205ENST00000427174 GRIN2AQ12879 1464 aa36.46■■■■□ 3.43
RPUSD3-205ENST00000427174 CHIC1Q5VXU3 224 aa36.46■■■■□ 3.43
RPUSD3-205ENST00000427174 CLASP1Q7Z460 1538 aa36.39■■■■□ 3.42
RPUSD3-205ENST00000427174 NUP160Q12769 1436 aa36.31■■■■□ 3.4
RPUSD3-205ENST00000427174 CEP170Q5SW79 1584 aa36.31■■■■□ 3.4
RPUSD3-205ENST00000427174 CARMIL1Q5VZK9 1371 aa36.27■■■■□ 3.4
RPUSD3-205ENST00000427174 RIMBP3CA6NJZ7 1639 aa36.14■■■■□ 3.38
RPUSD3-205ENST00000427174 RIMBP3BA6NNM3 1639 aa36.14■■■■□ 3.38
RPUSD3-205ENST00000427174 RIMBP3Q9UFD9 1639 aa36.14■■■■□ 3.38
RPUSD3-205ENST00000427174 EEA1Q15075 1411 aa36.14■■■■□ 3.38
RPUSD3-205ENST00000427174 ARHGEF11O15085 1522 aa36.13■■■■□ 3.37
RPUSD3-205ENST00000427174 RAPGEF2Q9Y4G8 1499 aa36.1■■■■□ 3.37
RPUSD3-205ENST00000427174 PRXQ9BXM0 1461 aa36.09■■■■□ 3.37
Retrieved 100 of 20,778 RNA–protein pairs in 289.3 ms