RNA–Protein interactions for RNA: ENST00000426958.1

OTOF-206, Transcript of otoferlin, humanhuman

TSL 3

Gene OTOF, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTOF-206ENST00000426958 NISCHQ9Y2I1 1504 aa35.22■■■■□ 3.23
OTOF-206ENST00000426958 CCDC180Q9P1Z9 1646 aa31.25■■■□□ 2.59
OTOF-206ENST00000426958 ABCC9O60706 1549 aa30.44■■■□□ 2.46
OTOF-206ENST00000426958 DCAF8L2P0C7V8 631 aa29.43■■■□□ 2.3
OTOF-206ENST00000426958 NACADO15069 1562 aa29.37■■■□□ 2.29
OTOF-206ENST00000426958 RB1CC1Q8TDY2 1594 aa29.37■■■□□ 2.29
OTOF-206ENST00000426958 ZCCHC6Q5VYS8 1495 aaKnown RBP29.34■■■□□ 2.29
OTOF-206ENST00000426958 MYO15BQ96JP2 1530 aa29.23■■■□□ 2.27
OTOF-206ENST00000426958 DCAF1Q9Y4B6 1507 aa29.15■■■□□ 2.26
OTOF-206ENST00000426958 UNC13AQ9UPW8 1703 aa28.68■■■□□ 2.18
OTOF-206ENST00000426958 SCRIBQ14160 1630 aa28.51■■■□□ 2.15
OTOF-206ENST00000426958 PABPN1Q86U42 306 aaKnown RBP eCLIP28.49■■■□□ 2.15
OTOF-206ENST00000426958 BICRAQ9NZM4 1560 aa28.42■■■□□ 2.14
OTOF-206ENST00000426958 SHROOM4Q9ULL8 1493 aa28.19■■■□□ 2.1
OTOF-206ENST00000426958 DNAJC5BQ9UF47 199 aa27.81■■■□□ 2.04
OTOF-206ENST00000426958 EIF4G1Q04637 1599 aaKnown RBP27.69■■■□□ 2.02
OTOF-206ENST00000426958 CC2D2AQ9P2K1 1620 aa27.55■■■□□ 2
OTOF-206ENST00000426958 CECR2Q9BXF3 1484 aa27.39■■□□□ 1.98
OTOF-206ENST00000426958 BAZ1AQ9NRL2 1556 aaPredicted RBP27.3■■□□□ 1.96
OTOF-206ENST00000426958 SMARCA4P51532 1647 aa27.29■■□□□ 1.96
OTOF-206ENST00000426958 MROH2BQ7Z745 1585 aa27.12■■□□□ 1.93
OTOF-206ENST00000426958 ATAD2BQ9ULI0 1458 aa27.12■■□□□ 1.93
OTOF-206ENST00000426958 SMARCA2P51531 1590 aa27.11■■□□□ 1.93
OTOF-206ENST00000426958 NCAPD3P42695 1498 aa27.09■■□□□ 1.93
OTOF-206ENST00000426958 PEG3Q9GZU2 1588 aa27.02■■□□□ 1.92
OTOF-206ENST00000426958 HMGXB3Q12766 1538 aa26.95■■□□□ 1.91
OTOF-206ENST00000426958 BAZ1BQ9UIG0 1483 aaKnown RBP26.91■■□□□ 1.9
OTOF-206ENST00000426958 RSF1Q96T23 1441 aaPredicted RBP26.87■■□□□ 1.89
OTOF-206ENST00000426958 WIZO95785 1651 aa26.85■■□□□ 1.89
OTOF-206ENST00000426958 TOP2AP11388 1531 aaKnown RBP26.58■■□□□ 1.85
OTOF-206ENST00000426958 LAMC3Q9Y6N6 1575 aa26.37■■□□□ 1.81
OTOF-206ENST00000426958 NESP48681 1621 aa26.36■■□□□ 1.81
OTOF-206ENST00000426958 SUPT5HO00267 1087 aaKnown RBP26.33■■□□□ 1.81
OTOF-206ENST00000426958 CADPSQ9ULU8 1353 aa26.32■■□□□ 1.8
OTOF-206ENST00000426958 CCDC88BA6NC98 1476 aa26.27■■□□□ 1.8
OTOF-206ENST00000426958 ERCC6Q03468 1493 aa26.26■■□□□ 1.79
OTOF-206ENST00000426958 PDS5BQ9NTI5 1447 aa26.2■■□□□ 1.78
OTOF-206ENST00000426958 CFTRP13569 1480 aa26.17■■□□□ 1.78
OTOF-206ENST00000426958 KIF21AQ7Z4S6 1674 aa26.07■■□□□ 1.76
OTOF-206ENST00000426958 FANCD2Q9BXW9 1451 aa26■■□□□ 1.75
OTOF-206ENST00000426958 PRDM2Q13029 1718 aa26■■□□□ 1.75
OTOF-206ENST00000426958 CEP164Q9UPV0 1460 aa25.97■■□□□ 1.75
OTOF-206ENST00000426958 THOC2Q8NI27 1593 aaKnown RBP25.94■■□□□ 1.74
OTOF-206ENST00000426958 CUX2O14529 1486 aa25.93■■□□□ 1.74
OTOF-206ENST00000426958 MRC2Q9UBG0 1479 aa25.9■■□□□ 1.74
OTOF-206ENST00000426958 WDR62O43379 1518 aa25.79■■□□□ 1.72
OTOF-206ENST00000426958 URB2Q14146 1524 aaKnown RBP25.71■■□□□ 1.71
OTOF-206ENST00000426958 ABCC8Q09428 1581 aa25.65■■□□□ 1.7
OTOF-206ENST00000426958 TOPBP1Q92547 1522 aa25.59■■□□□ 1.69
OTOF-206ENST00000426958 DNMBPQ6XZF7 1577 aa25.58■■□□□ 1.69
OTOF-206ENST00000426958 CUX1P39880 1505 aa25.43■■□□□ 1.66
OTOF-206ENST00000426958 IFT140Q96RY7 1462 aa25.42■■□□□ 1.66
OTOF-206ENST00000426958 POLA1P09884 1462 aaPredicted RBP25.38■■□□□ 1.65
OTOF-206ENST00000426958 WRNQ14191 1432 aaPredicted RBP eCLIP25.36■■□□□ 1.65
OTOF-206ENST00000426958 FGD5Q6ZNL6 1462 aa25.34■■□□□ 1.65
OTOF-206ENST00000426958 SOGA1O94964 1423 aa25.31■■□□□ 1.64
OTOF-206ENST00000426958 TARBP1Q13395 1621 aaKnown RBP25.29■■□□□ 1.64
OTOF-206ENST00000426958 TOP2BQ02880 1626 aa25.27■■□□□ 1.64
OTOF-206ENST00000426958 RAD54L2Q9Y4B4 1467 aa25.27■■□□□ 1.64
OTOF-206ENST00000426958 BIVM-ERCC5R4GMW8 1640 aa25.26■■□□□ 1.63
OTOF-206ENST00000426958 ZNF608Q9ULD9 1512 aaPredicted RBP25.26■■□□□ 1.63
OTOF-206ENST00000426958 SYNJ1O43426 1573 aa25.25■■□□□ 1.63
OTOF-206ENST00000426958 EIF4G3O43432 1585 aaKnown RBP25.17■■□□□ 1.62
OTOF-206ENST00000426958 AQRO60306 1485 aaKnown RBP eCLIP25.15■■□□□ 1.62
OTOF-206ENST00000426958 WDR97A6NE52 1622 aa25.14■■□□□ 1.61
OTOF-206ENST00000426958 TDRD9Q8NDG6 1382 aaKnown RBP25.14■■□□□ 1.61
OTOF-206ENST00000426958 ABCA10Q8WWZ4 1543 aa25.12■■□□□ 1.61
OTOF-206ENST00000426958 GAPVD1Q14C86 1478 aa25.02■■□□□ 1.6
OTOF-206ENST00000426958 GRIN2BQ13224 1484 aa24.99■■□□□ 1.59
OTOF-206ENST00000426958 DNAJC5Q9H3Z4 198 aa24.99■■□□□ 1.59
OTOF-206ENST00000426958 ABCA5Q8WWZ7 1642 aa24.98■■□□□ 1.59
OTOF-206ENST00000426958 PBRM1Q86U86 1689 aa24.94■■□□□ 1.58
OTOF-206ENST00000426958 SNAPC4Q5SXM2 1469 aa24.92■■□□□ 1.58
OTOF-206ENST00000426958 OSCARQ8IYS5 282 aa24.92■■□□□ 1.58
OTOF-206ENST00000426958 MAGI1Q96QZ7 1491 aaPredicted RBP24.91■■□□□ 1.58
OTOF-206ENST00000426958 TRIM41Q8WV44 630 aa24.89■■□□□ 1.58
OTOF-206ENST00000426958 FBLN2P98095 1184 aa24.87■■□□□ 1.57
OTOF-206ENST00000426958 CHD1O14646 1710 aa24.84■■□□□ 1.57
OTOF-206ENST00000426958 CHMP7Q8WUX9 453 aaPredicted RBP24.84■■□□□ 1.57
OTOF-206ENST00000426958 KIF27Q86VH2 1401 aa24.84■■□□□ 1.57
OTOF-206ENST00000426958 ERICH3Q5RHP9 1530 aa24.82■■□□□ 1.56
OTOF-206ENST00000426958 SYNJ2O15056 1496 aa24.81■■□□□ 1.56
OTOF-206ENST00000426958 FHAD1B1AJZ9 1412 aa24.74■■□□□ 1.55
OTOF-206ENST00000426958 ADAMTS12P58397 1594 aa24.73■■□□□ 1.55
OTOF-206ENST00000426958 IGF1RP08069 1367 aa24.69■■□□□ 1.54
OTOF-206ENST00000426958 GRIN2AQ12879 1464 aa24.66■■□□□ 1.54
OTOF-206ENST00000426958 CHIC1Q5VXU3 224 aa24.64■■□□□ 1.54
OTOF-206ENST00000426958 CUL7Q14999 1698 aa24.62■■□□□ 1.53
OTOF-206ENST00000426958 RUSC2Q8N2Y8 1516 aa24.6■■□□□ 1.53
OTOF-206ENST00000426958 CARMIL1Q5VZK9 1371 aa24.57■■□□□ 1.52
OTOF-206ENST00000426958 CLASP1Q7Z460 1538 aa24.56■■□□□ 1.52
OTOF-206ENST00000426958 NUP160Q12769 1436 aa24.54■■□□□ 1.52
OTOF-206ENST00000426958 CEP170Q5SW79 1584 aa24.51■■□□□ 1.51
OTOF-206ENST00000426958 ARHGEF11O15085 1522 aa24.45■■□□□ 1.51
OTOF-206ENST00000426958 EEA1Q15075 1411 aa24.45■■□□□ 1.51
OTOF-206ENST00000426958 RIMBP3CA6NJZ7 1639 aa24.45■■□□□ 1.5
OTOF-206ENST00000426958 RIMBP3BA6NNM3 1639 aa24.45■■□□□ 1.5
OTOF-206ENST00000426958 RIMBP3Q9UFD9 1639 aa24.45■■□□□ 1.5
OTOF-206ENST00000426958 RAPGEF2Q9Y4G8 1499 aa24.44■■□□□ 1.5
OTOF-206ENST00000426958 CSRNP3Q8WYN3 585 aa24.41■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms