RNA–Protein interactions for RNA: ENST00000426911.2

SRRM1P3-201, Transcript of serine/arginine repetitive matrix 1 pseudogene 3, humanhuman

BASIC

Gene SRRM1P3, Length 2,678 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1P3-201ENST00000426911 AEBP2Q6ZN18 517 aaPredicted RBP14.38□□□□□ -0.11
SRRM1P3-201ENST00000426911 NISCHQ9Y2I1 1504 aa13.76□□□□□ -0.21
SRRM1P3-201ENST00000426911 CHIC1Q5VXU3 224 aa13.76□□□□□ -0.21
SRRM1P3-201ENST00000426911 PHF23Q9BUL5 403 aaPredicted RBP12.23□□□□□ -0.45
SRRM1P3-201ENST00000426911 CCDC180Q9P1Z9 1646 aa12.15□□□□□ -0.46
SRRM1P3-201ENST00000426911 ABCC9O60706 1549 aa12.04□□□□□ -0.48
SRRM1P3-201ENST00000426911 SENP3Q9H4L4 574 aaPredicted RBP11.99□□□□□ -0.49
SRRM1P3-201ENST00000426911 DCAF8L2P0C7V8 631 aa11.64□□□□□ -0.55
SRRM1P3-201ENST00000426911 RB1CC1Q8TDY2 1594 aa11.47□□□□□ -0.57
SRRM1P3-201ENST00000426911 ZCCHC6Q5VYS8 1495 aaKnown RBP11.46□□□□□ -0.58
SRRM1P3-201ENST00000426911 NACADO15069 1562 aa11.44□□□□□ -0.58
SRRM1P3-201ENST00000426911 MYO15BQ96JP2 1530 aa11.33□□□□□ -0.6
SRRM1P3-201ENST00000426911 FOXD1Q16676 465 aa11.31□□□□□ -0.6
SRRM1P3-201ENST00000426911 DCAF1Q9Y4B6 1507 aa11.31□□□□□ -0.6
SRRM1P3-201ENST00000426911 PABPN1Q86U42 306 aaKnown RBP eCLIP11.3□□□□□ -0.6
SRRM1P3-201ENST00000426911 UNC13AQ9UPW8 1703 aa11.25□□□□□ -0.61
SRRM1P3-201ENST00000426911 SCRIBQ14160 1630 aa11.21□□□□□ -0.61
SRRM1P3-201ENST00000426911 BICRAQ9NZM4 1560 aa11.18□□□□□ -0.62
SRRM1P3-201ENST00000426911 DNAJC5BQ9UF47 199 aa11.11□□□□□ -0.63
SRRM1P3-201ENST00000426911 PLPPR3Q6T4P5 718 aa11.06□□□□□ -0.64
SRRM1P3-201ENST00000426911 SHROOM4Q9ULL8 1493 aa11.03□□□□□ -0.64
SRRM1P3-201ENST00000426911 PPP6R1Q9UPN7 881 aa10.89□□□□□ -0.67
SRRM1P3-201ENST00000426911 EIF4G1Q04637 1599 aaKnown RBP10.87□□□□□ -0.67
SRRM1P3-201ENST00000426911 CC2D2AQ9P2K1 1620 aa10.84□□□□□ -0.67
SRRM1P3-201ENST00000426911 ADRA2BP18089 450 aa10.83□□□□□ -0.68
SRRM1P3-201ENST00000426911 CECR2Q9BXF3 1484 aa10.8□□□□□ -0.68
SRRM1P3-201ENST00000426911 SMARCA4P51532 1647 aa10.67□□□□□ -0.7
SRRM1P3-201ENST00000426911 MROH2BQ7Z745 1585 aa10.66□□□□□ -0.7
SRRM1P3-201ENST00000426911 BAZ1AQ9NRL2 1556 aaPredicted RBP10.64□□□□□ -0.71
SRRM1P3-201ENST00000426911 ATAD2BQ9ULI0 1458 aa10.63□□□□□ -0.71
SRRM1P3-201ENST00000426911 NCAPD3P42695 1498 aa10.59□□□□□ -0.71
SRRM1P3-201ENST00000426911 PIAS4Q8N2W9 510 aaPredicted RBP10.59□□□□□ -0.71
SRRM1P3-201ENST00000426911 SMARCA2P51531 1590 aa10.56□□□□□ -0.72
SRRM1P3-201ENST00000426911 WIZO95785 1651 aa10.54□□□□□ -0.72
SRRM1P3-201ENST00000426911 BAZ1BQ9UIG0 1483 aaKnown RBP10.54□□□□□ -0.72
SRRM1P3-201ENST00000426911 RSF1Q96T23 1441 aaPredicted RBP10.53□□□□□ -0.72
SRRM1P3-201ENST00000426911 PEG3Q9GZU2 1588 aa10.52□□□□□ -0.73
SRRM1P3-201ENST00000426911 HMGXB3Q12766 1538 aa10.51□□□□□ -0.73
SRRM1P3-201ENST00000426911 NESP48681 1621 aa10.43□□□□□ -0.74
SRRM1P3-201ENST00000426911 SUPT5HO00267 1087 aaKnown RBP10.37□□□□□ -0.75
SRRM1P3-201ENST00000426911 TOP2AP11388 1531 aaKnown RBP10.36□□□□□ -0.75
SRRM1P3-201ENST00000426911 ERCC6Q03468 1493 aa10.33□□□□□ -0.76
SRRM1P3-201ENST00000426911 CADPSQ9ULU8 1353 aa10.31□□□□□ -0.76
SRRM1P3-201ENST00000426911 CCDC88BA6NC98 1476 aa10.3□□□□□ -0.76
SRRM1P3-201ENST00000426911 LAMC3Q9Y6N6 1575 aa10.29□□□□□ -0.76
SRRM1P3-201ENST00000426911 MSH5O43196 834 aa10.27□□□□□ -0.77
SRRM1P3-201ENST00000426911 KIF21AQ7Z4S6 1674 aa10.25□□□□□ -0.77
SRRM1P3-201ENST00000426911 PDS5BQ9NTI5 1447 aa10.24□□□□□ -0.77
SRRM1P3-201ENST00000426911 CFTRP13569 1480 aa10.24□□□□□ -0.77
SRRM1P3-201ENST00000426911 FANCD2Q9BXW9 1451 aa10.2□□□□□ -0.78
SRRM1P3-201ENST00000426911 THOC2Q8NI27 1593 aaKnown RBP10.19□□□□□ -0.78
SRRM1P3-201ENST00000426911 CEP164Q9UPV0 1460 aa10.17□□□□□ -0.78
SRRM1P3-201ENST00000426911 CUX2O14529 1486 aa10.14□□□□□ -0.79
SRRM1P3-201ENST00000426911 MRC2Q9UBG0 1479 aa10.14□□□□□ -0.79
SRRM1P3-201ENST00000426911 URB2Q14146 1524 aaKnown RBP10.11□□□□□ -0.79
SRRM1P3-201ENST00000426911 WDR62O43379 1518 aa10.09□□□□□ -0.79
SRRM1P3-201ENST00000426911 PRDM2Q13029 1718 aa10.09□□□□□ -0.79
SRRM1P3-201ENST00000426911 TOPBP1Q92547 1522 aa10.03□□□□□ -0.8
SRRM1P3-201ENST00000426911 DNMBPQ6XZF7 1577 aa9.99□□□□□ -0.81
SRRM1P3-201ENST00000426911 CUX1P39880 1505 aa9.98□□□□□ -0.81
SRRM1P3-201ENST00000426911 ZNF608Q9ULD9 1512 aaPredicted RBP9.98□□□□□ -0.81
SRRM1P3-201ENST00000426911 ABCC8Q09428 1581 aa9.97□□□□□ -0.81
SRRM1P3-201ENST00000426911 POLA1P09884 1462 aaPredicted RBP9.96□□□□□ -0.81
SRRM1P3-201ENST00000426911 RAD54L2Q9Y4B4 1467 aa9.96□□□□□ -0.81
SRRM1P3-201ENST00000426911 FGD5Q6ZNL6 1462 aa9.94□□□□□ -0.82
SRRM1P3-201ENST00000426911 IFT140Q96RY7 1462 aa9.93□□□□□ -0.82
SRRM1P3-201ENST00000426911 SOGA1O94964 1423 aa9.92□□□□□ -0.82
SRRM1P3-201ENST00000426911 AQRO60306 1485 aaKnown RBP eCLIP9.92□□□□□ -0.82
SRRM1P3-201ENST00000426911 TDRD9Q8NDG6 1382 aaKnown RBP9.92□□□□□ -0.82
SRRM1P3-201ENST00000426911 WRNQ14191 1432 aaPredicted RBP eCLIP9.91□□□□□ -0.82
SRRM1P3-201ENST00000426911 TARBP1Q13395 1621 aaKnown RBP9.91□□□□□ -0.82
SRRM1P3-201ENST00000426911 MAPK8IP2Q13387 824 aaPredicted RBP9.91□□□□□ -0.82
SRRM1P3-201ENST00000426911 DNAJC5Q9H3Z4 198 aa9.91□□□□□ -0.82
SRRM1P3-201ENST00000426911 SYNJ1O43426 1573 aa9.9□□□□□ -0.82
SRRM1P3-201ENST00000426911 EIF4G3O43432 1585 aaKnown RBP9.88□□□□□ -0.83
SRRM1P3-201ENST00000426911 TOP2BQ02880 1626 aa9.85□□□□□ -0.83
SRRM1P3-201ENST00000426911 BIVM-ERCC5R4GMW8 1640 aa9.84□□□□□ -0.83
SRRM1P3-201ENST00000426911 FBLN2P98095 1184 aa9.84□□□□□ -0.83
SRRM1P3-201ENST00000426911 ABCA10Q8WWZ4 1543 aa9.81□□□□□ -0.84
SRRM1P3-201ENST00000426911 WDR97A6NE52 1622 aa9.81□□□□□ -0.84
SRRM1P3-201ENST00000426911 PPP4R3CPQ6ZMV5 832 aa9.8□□□□□ -0.84
SRRM1P3-201ENST00000426911 OSCARQ8IYS5 282 aa9.8□□□□□ -0.84
SRRM1P3-201ENST00000426911 GAPVD1Q14C86 1478 aa9.8□□□□□ -0.84
SRRM1P3-201ENST00000426911 SNAPC4Q5SXM2 1469 aa9.79□□□□□ -0.84
SRRM1P3-201ENST00000426911 GRIN2BQ13224 1484 aa9.77□□□□□ -0.84
SRRM1P3-201ENST00000426911 ABCA5Q8WWZ7 1642 aa9.76□□□□□ -0.85
SRRM1P3-201ENST00000426911 CHD1O14646 1710 aa9.76□□□□□ -0.85
SRRM1P3-201ENST00000426911 CHMP7Q8WUX9 453 aaPredicted RBP9.76□□□□□ -0.85
SRRM1P3-201ENST00000426911 PBRM1Q86U86 1689 aa9.75□□□□□ -0.85
SRRM1P3-201ENST00000426911 POTEDQ86YR6 584 aa9.74□□□□□ -0.85
SRRM1P3-201ENST00000426911 TRIM41Q8WV44 630 aa9.73□□□□□ -0.85
SRRM1P3-201ENST00000426911 MAGI1Q96QZ7 1491 aaPredicted RBP9.72□□□□□ -0.85
SRRM1P3-201ENST00000426911 SYNJ2O15056 1496 aa9.71□□□□□ -0.86
SRRM1P3-201ENST00000426911 RUSC2Q8N2Y8 1516 aa9.7□□□□□ -0.86
SRRM1P3-201ENST00000426911 KIF27Q86VH2 1401 aa9.68□□□□□ -0.86
SRRM1P3-201ENST00000426911 IGF1RP08069 1367 aa9.68□□□□□ -0.86
SRRM1P3-201ENST00000426911 ADAMTS12P58397 1594 aa9.68□□□□□ -0.86
SRRM1P3-201ENST00000426911 ERICH3Q5RHP9 1530 aa9.67□□□□□ -0.86
SRRM1P3-201ENST00000426911 GRIN2AQ12879 1464 aa9.66□□□□□ -0.86
SRRM1P3-201ENST00000426911 FHAD1B1AJZ9 1412 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms