RNA–Protein interactions for RNA: ENST00000426619.6

DDX47-204, Transcript of DEAD-box helicase 47, humanhuman

TSL 4

Gene DDX47, Length 531 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47-204ENST00000426619 NISCHQ9Y2I1 1504 aa19.66■□□□□ 0.74
DDX47-204ENST00000426619 CHIC1Q5VXU3 224 aa17.83■□□□□ 0.44
DDX47-204ENST00000426619 AEBP2Q6ZN18 517 aaPredicted RBP17.77■□□□□ 0.44
DDX47-204ENST00000426619 CCDC180Q9P1Z9 1646 aa17.39■□□□□ 0.37
DDX47-204ENST00000426619 ABCC9O60706 1549 aa16.82■□□□□ 0.28
DDX47-204ENST00000426619 ZCCHC6Q5VYS8 1495 aaKnown RBP16.42■□□□□ 0.22
DDX47-204ENST00000426619 DCAF8L2P0C7V8 631 aa16.31■□□□□ 0.2
DDX47-204ENST00000426619 NACADO15069 1562 aa16.3■□□□□ 0.2
DDX47-204ENST00000426619 MYO15BQ96JP2 1530 aa16.28■□□□□ 0.2
DDX47-204ENST00000426619 DCAF1Q9Y4B6 1507 aa16.28■□□□□ 0.2
DDX47-204ENST00000426619 RB1CC1Q8TDY2 1594 aa16.26■□□□□ 0.19
DDX47-204ENST00000426619 UNC13AQ9UPW8 1703 aa15.91■□□□□ 0.14
DDX47-204ENST00000426619 SCRIBQ14160 1630 aa15.88■□□□□ 0.13
DDX47-204ENST00000426619 BICRAQ9NZM4 1560 aa15.79■□□□□ 0.12
DDX47-204ENST00000426619 PABPN1Q86U42 306 aaKnown RBP eCLIP15.75■□□□□ 0.11
DDX47-204ENST00000426619 PHF23Q9BUL5 403 aaPredicted RBP15.75■□□□□ 0.11
DDX47-204ENST00000426619 SHROOM4Q9ULL8 1493 aa15.64■□□□□ 0.09
DDX47-204ENST00000426619 POTEDQ86YR6 584 aa15.62■□□□□ 0.09
DDX47-204ENST00000426619 EIF4G1Q04637 1599 aaKnown RBP15.34■□□□□ 0.05
DDX47-204ENST00000426619 CECR2Q9BXF3 1484 aa15.29■□□□□ 0.04
DDX47-204ENST00000426619 DNAJC5BQ9UF47 199 aa15.27■□□□□ 0.04
DDX47-204ENST00000426619 CC2D2AQ9P2K1 1620 aa15.23■□□□□ 0.03
DDX47-204ENST00000426619 BAZ1AQ9NRL2 1556 aaPredicted RBP15.22■□□□□ 0.03
DDX47-204ENST00000426619 SMARCA4P51532 1647 aa15.21■□□□□ 0.03
DDX47-204ENST00000426619 MROH2BQ7Z745 1585 aa15.15■□□□□ 0.02
DDX47-204ENST00000426619 ATAD2BQ9ULI0 1458 aa15.08■□□□□ 0
DDX47-204ENST00000426619 SENP3Q9H4L4 574 aaPredicted RBP15.07■□□□□ 0
DDX47-204ENST00000426619 SMARCA2P51531 1590 aa15.07■□□□□ 0
DDX47-204ENST00000426619 PEG3Q9GZU2 1588 aa15.07■□□□□ 0
DDX47-204ENST00000426619 RSF1Q96T23 1441 aaPredicted RBP15.06■□□□□ 0
DDX47-204ENST00000426619 NCAPD3P42695 1498 aa15.04■□□□□ -0
DDX47-204ENST00000426619 WIZO95785 1651 aa15□□□□□ -0.01
DDX47-204ENST00000426619 HMGXB3Q12766 1538 aa14.99□□□□□ -0.01
DDX47-204ENST00000426619 BAZ1BQ9UIG0 1483 aaKnown RBP14.96□□□□□ -0.01
DDX47-204ENST00000426619 TOP2AP11388 1531 aaKnown RBP14.86□□□□□ -0.03
DDX47-204ENST00000426619 SUPT5HO00267 1087 aaKnown RBP14.79□□□□□ -0.04
DDX47-204ENST00000426619 PLPPR3Q6T4P5 718 aa14.7□□□□□ -0.06
DDX47-204ENST00000426619 CCDC88BA6NC98 1476 aa14.68□□□□□ -0.06
DDX47-204ENST00000426619 NESP48681 1621 aa14.63□□□□□ -0.07
DDX47-204ENST00000426619 CADPSQ9ULU8 1353 aa14.61□□□□□ -0.07
DDX47-204ENST00000426619 LAMC3Q9Y6N6 1575 aa14.61□□□□□ -0.07
DDX47-204ENST00000426619 CFTRP13569 1480 aa14.57□□□□□ -0.08
DDX47-204ENST00000426619 PDS5BQ9NTI5 1447 aa14.5□□□□□ -0.09
DDX47-204ENST00000426619 ERCC6Q03468 1493 aa14.48□□□□□ -0.09
DDX47-204ENST00000426619 PRDM2Q13029 1718 aa14.46□□□□□ -0.09
DDX47-204ENST00000426619 KIF21AQ7Z4S6 1674 aa14.45□□□□□ -0.1
DDX47-204ENST00000426619 FANCD2Q9BXW9 1451 aa14.44□□□□□ -0.1
DDX47-204ENST00000426619 CEP164Q9UPV0 1460 aa14.4□□□□□ -0.1
DDX47-204ENST00000426619 THOC2Q8NI27 1593 aaKnown RBP14.36□□□□□ -0.11
DDX47-204ENST00000426619 MRC2Q9UBG0 1479 aa14.35□□□□□ -0.11
DDX47-204ENST00000426619 WDR62O43379 1518 aa14.3□□□□□ -0.12
DDX47-204ENST00000426619 URB2Q14146 1524 aaKnown RBP14.3□□□□□ -0.12
DDX47-204ENST00000426619 FOXD1Q16676 465 aa14.28□□□□□ -0.12
DDX47-204ENST00000426619 CUX2O14529 1486 aa14.26□□□□□ -0.13
DDX47-204ENST00000426619 DNMBPQ6XZF7 1577 aa14.24□□□□□ -0.13
DDX47-204ENST00000426619 TOPBP1Q92547 1522 aa14.24□□□□□ -0.13
DDX47-204ENST00000426619 ABCC8Q09428 1581 aa14.23□□□□□ -0.13
DDX47-204ENST00000426619 CUX1P39880 1505 aa14.2□□□□□ -0.14
DDX47-204ENST00000426619 WRNQ14191 1432 aaPredicted RBP eCLIP14.18□□□□□ -0.14
DDX47-204ENST00000426619 SYNJ1O43426 1573 aa14.14□□□□□ -0.15
DDX47-204ENST00000426619 TOP2BQ02880 1626 aa14.14□□□□□ -0.15
DDX47-204ENST00000426619 POLA1P09884 1462 aaPredicted RBP14.13□□□□□ -0.15
DDX47-204ENST00000426619 BIVM-ERCC5R4GMW8 1640 aa14.13□□□□□ -0.15
DDX47-204ENST00000426619 FGD5Q6ZNL6 1462 aa14.12□□□□□ -0.15
DDX47-204ENST00000426619 IFT140Q96RY7 1462 aa14.1□□□□□ -0.15
DDX47-204ENST00000426619 TARBP1Q13395 1621 aaKnown RBP14.07□□□□□ -0.16
DDX47-204ENST00000426619 SOGA1O94964 1423 aa14.07□□□□□ -0.16
DDX47-204ENST00000426619 RAD54L2Q9Y4B4 1467 aa14.06□□□□□ -0.16
DDX47-204ENST00000426619 DNAJC5Q9H3Z4 198 aa14.05□□□□□ -0.16
DDX47-204ENST00000426619 ZNF608Q9ULD9 1512 aaPredicted RBP14.02□□□□□ -0.16
DDX47-204ENST00000426619 WDR97A6NE52 1622 aa14.01□□□□□ -0.17
DDX47-204ENST00000426619 ABCA10Q8WWZ4 1543 aa14□□□□□ -0.17
DDX47-204ENST00000426619 EIF4G3O43432 1585 aaKnown RBP13.97□□□□□ -0.17
DDX47-204ENST00000426619 TDRD9Q8NDG6 1382 aaKnown RBP13.96□□□□□ -0.17
DDX47-204ENST00000426619 AQRO60306 1485 aaKnown RBP eCLIP13.96□□□□□ -0.174e-6■■■■□ 20.6
DDX47-204ENST00000426619 TRIM41Q8WV44 630 aa13.96□□□□□ -0.17
DDX47-204ENST00000426619 ABCA5Q8WWZ7 1642 aa13.93□□□□□ -0.18
DDX47-204ENST00000426619 GAPVD1Q14C86 1478 aa13.91□□□□□ -0.18
DDX47-204ENST00000426619 GRIN2BQ13224 1484 aa13.88□□□□□ -0.19
DDX47-204ENST00000426619 PBRM1Q86U86 1689 aa13.87□□□□□ -0.19
DDX47-204ENST00000426619 KIF27Q86VH2 1401 aa13.87□□□□□ -0.19
DDX47-204ENST00000426619 SNAPC4Q5SXM2 1469 aa13.85□□□□□ -0.19
DDX47-204ENST00000426619 MAGI1Q96QZ7 1491 aaPredicted RBP13.83□□□□□ -0.2
DDX47-204ENST00000426619 ERICH3Q5RHP9 1530 aa13.83□□□□□ -0.2
DDX47-204ENST00000426619 RUSC2Q8N2Y8 1516 aa13.8□□□□□ -0.2
DDX47-204ENST00000426619 ADRA2BP18089 450 aa13.79□□□□□ -0.2
DDX47-204ENST00000426619 IGF1RP08069 1367 aa13.79□□□□□ -0.2
DDX47-204ENST00000426619 ADAMTS12P58397 1594 aa13.78□□□□□ -0.2
DDX47-204ENST00000426619 SYNJ2O15056 1496 aa13.77□□□□□ -0.21
DDX47-204ENST00000426619 FHAD1B1AJZ9 1412 aa13.76□□□□□ -0.21
DDX47-204ENST00000426619 CHD1O14646 1710 aa13.76□□□□□ -0.21
DDX47-204ENST00000426619 MSH5O43196 834 aa13.75□□□□□ -0.21
DDX47-204ENST00000426619 FBLN2P98095 1184 aa13.74□□□□□ -0.21
DDX47-204ENST00000426619 CHMP7Q8WUX9 453 aaPredicted RBP13.74□□□□□ -0.21
DDX47-204ENST00000426619 PPP6R1Q9UPN7 881 aa13.74□□□□□ -0.21
DDX47-204ENST00000426619 CUL7Q14999 1698 aa13.74□□□□□ -0.21
DDX47-204ENST00000426619 EEA1Q15075 1411 aa13.73□□□□□ -0.21
DDX47-204ENST00000426619 CARMIL1Q5VZK9 1371 aa13.71□□□□□ -0.21
DDX47-204ENST00000426619 GRIN2AQ12879 1464 aa13.71□□□□□ -0.21
DDX47-204ENST00000426619 OSCARQ8IYS5 282 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms