RNA–Protein interactions for RNA: ENST00000424932.2

CKS1BP6-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 6, humanhuman

BASIC

Gene CKS1BP6, Length 240 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP6-201ENST00000424932 NISCHQ9Y2I1 1504 aa10.55□□□□□ -0.72
CKS1BP6-201ENST00000424932 CCDC180Q9P1Z9 1646 aa9.22□□□□□ -0.93
CKS1BP6-201ENST00000424932 ZCCHC6Q5VYS8 1495 aaKnown RBP8.95□□□□□ -0.98
CKS1BP6-201ENST00000424932 DCAF1Q9Y4B6 1507 aa8.8□□□□□ -1
CKS1BP6-201ENST00000424932 MYO15BQ96JP2 1530 aa8.61□□□□□ -1.03
CKS1BP6-201ENST00000424932 SHROOM4Q9ULL8 1493 aa8.61□□□□□ -1.03
CKS1BP6-201ENST00000424932 ABCC9O60706 1549 aa8.47□□□□□ -1.05
CKS1BP6-201ENST00000424932 NACADO15069 1562 aa8.44□□□□□ -1.06
CKS1BP6-201ENST00000424932 SCRIBQ14160 1630 aa8.38□□□□□ -1.07
CKS1BP6-201ENST00000424932 SUPT5HO00267 1087 aaKnown RBP8.37□□□□□ -1.07
CKS1BP6-201ENST00000424932 DCAF8L2P0C7V8 631 aa8.37□□□□□ -1.07
CKS1BP6-201ENST00000424932 RB1CC1Q8TDY2 1594 aa8.3□□□□□ -1.08
CKS1BP6-201ENST00000424932 UNC13AQ9UPW8 1703 aa8.24□□□□□ -1.09
CKS1BP6-201ENST00000424932 RSF1Q96T23 1441 aaPredicted RBP8.23□□□□□ -1.09
CKS1BP6-201ENST00000424932 CHIC1Q5VXU3 224 aa8.21□□□□□ -1.1
CKS1BP6-201ENST00000424932 BAZ1AQ9NRL2 1556 aaPredicted RBP8.17□□□□□ -1.1
CKS1BP6-201ENST00000424932 MROH2BQ7Z745 1585 aa8.14□□□□□ -1.11
CKS1BP6-201ENST00000424932 CECR2Q9BXF3 1484 aa8.12□□□□□ -1.11
CKS1BP6-201ENST00000424932 WIZO95785 1651 aa8.11□□□□□ -1.11
CKS1BP6-201ENST00000424932 EIF4G1Q04637 1599 aaKnown RBP8.11□□□□□ -1.11
CKS1BP6-201ENST00000424932 SMARCA4P51532 1647 aa8.11□□□□□ -1.11
CKS1BP6-201ENST00000424932 TOP2AP11388 1531 aaKnown RBP8.06□□□□□ -1.12
CKS1BP6-201ENST00000424932 BICRAQ9NZM4 1560 aa8.05□□□□□ -1.12
CKS1BP6-201ENST00000424932 PEG3Q9GZU2 1588 aa8.03□□□□□ -1.12
CKS1BP6-201ENST00000424932 SMARCA2P51531 1590 aa7.99□□□□□ -1.13
CKS1BP6-201ENST00000424932 CCDC88BA6NC98 1476 aa7.91□□□□□ -1.14
CKS1BP6-201ENST00000424932 TRIM41Q8WV44 630 aa7.89□□□□□ -1.15
CKS1BP6-201ENST00000424932 LOC105371045A0A1W2PR82 267 aa7.84□□□□□ -1.15
CKS1BP6-201ENST00000424932 ABCC8Q09428 1581 aa7.84□□□□□ -1.15
CKS1BP6-201ENST00000424932 ATAD2BQ9ULI0 1458 aa7.83□□□□□ -1.16
CKS1BP6-201ENST00000424932 HMGXB3Q12766 1538 aa7.83□□□□□ -1.16
CKS1BP6-201ENST00000424932 EEA1Q15075 1411 aa7.81□□□□□ -1.16
CKS1BP6-201ENST00000424932 HRCP23327 699 aa7.81□□□□□ -1.16
CKS1BP6-201ENST00000424932 BAZ1BQ9UIG0 1483 aaKnown RBP7.81□□□□□ -1.16
CKS1BP6-201ENST00000424932 PRDM2Q13029 1718 aa7.8□□□□□ -1.16
CKS1BP6-201ENST00000424932 BIVM-ERCC5R4GMW8 1640 aa7.77□□□□□ -1.17
CKS1BP6-201ENST00000424932 SYNJ1O43426 1573 aa7.76□□□□□ -1.17
CKS1BP6-201ENST00000424932 TRIM26Q12899 539 aaPredicted RBP7.76□□□□□ -1.17
CKS1BP6-201ENST00000424932 PABPN1Q86U42 306 aaKnown RBP eCLIP7.76□□□□□ -1.17
CKS1BP6-201ENST00000424932 PCGF6Q9BYE7 350 aa7.76□□□□□ -1.17
CKS1BP6-201ENST00000424932 KIF21BO75037 1637 aa7.75□□□□□ -1.17
CKS1BP6-201ENST00000424932 WRNQ14191 1432 aaPredicted RBP eCLIP7.75□□□□□ -1.17
CKS1BP6-201ENST00000424932 NCAPD3P42695 1498 aa7.75□□□□□ -1.17
CKS1BP6-201ENST00000424932 TOP2BQ02880 1626 aa7.74□□□□□ -1.17
CKS1BP6-201ENST00000424932 GOLGA3Q08378 1498 aa7.69□□□□□ -1.18
CKS1BP6-201ENST00000424932 FAM9AQ8IZU1 332 aaPredicted RBP7.69□□□□□ -1.18
CKS1BP6-201ENST00000424932 TNIKQ9UKE5 1360 aa7.69□□□□□ -1.18
CKS1BP6-201ENST00000424932 SOGA1O94964 1423 aa7.69□□□□□ -1.18
CKS1BP6-201ENST00000424932 CEP162Q5TB80 1403 aa7.67□□□□□ -1.18
CKS1BP6-201ENST00000424932 CEP164Q9UPV0 1460 aa7.67□□□□□ -1.18
CKS1BP6-201ENST00000424932 RUSC2Q8N2Y8 1516 aa7.65□□□□□ -1.18
CKS1BP6-201ENST00000424932 ERICH3Q5RHP9 1530 aa7.64□□□□□ -1.19
CKS1BP6-201ENST00000424932 CFTRP13569 1480 aa7.64□□□□□ -1.19
CKS1BP6-201ENST00000424932 CSRNP3Q8WYN3 585 aa7.62□□□□□ -1.19
CKS1BP6-201ENST00000424932 ZEB1P37275 1124 aaPredicted RBP7.61□□□□□ -1.19
CKS1BP6-201ENST00000424932 CUX1P39880 1505 aa7.61□□□□□ -1.19
CKS1BP6-201ENST00000424932 CC2D2AQ9P2K1 1620 aa7.58□□□□□ -1.2
CKS1BP6-201ENST00000424932 PRXQ9BXM0 1461 aa7.56□□□□□ -1.2
CKS1BP6-201ENST00000424932 RAPGEF2Q9Y4G8 1499 aa7.55□□□□□ -1.2
CKS1BP6-201ENST00000424932 CLIP1P30622 1438 aa7.54□□□□□ -1.2
CKS1BP6-201ENST00000424932 VPS8Q8N3P4 1428 aa7.54□□□□□ -1.2
CKS1BP6-201ENST00000424932 KIF27Q86VH2 1401 aa7.52□□□□□ -1.2
CKS1BP6-201ENST00000424932 CADPSQ9ULU8 1353 aa7.51□□□□□ -1.21
CKS1BP6-201ENST00000424932 PPARGC1BQ86YN6 1023 aaKnown RBP7.51□□□□□ -1.21
CKS1BP6-201ENST00000424932 EHMT2Q96KQ7 1210 aa7.51□□□□□ -1.21
CKS1BP6-201ENST00000424932 DNMBPQ6XZF7 1577 aa7.5□□□□□ -1.21
CKS1BP6-201ENST00000424932 WDR97A6NE52 1622 aa7.5□□□□□ -1.21
CKS1BP6-201ENST00000424932 UBTFP17480 764 aaKnown RBP7.5□□□□□ -1.21
CKS1BP6-201ENST00000424932 LAMC3Q9Y6N6 1575 aa7.49□□□□□ -1.21
CKS1BP6-201ENST00000424932 ARAP1Q96P48 1450 aa7.48□□□□□ -1.21
CKS1BP6-201ENST00000424932 FGD5Q6ZNL6 1462 aa7.47□□□□□ -1.21
CKS1BP6-201ENST00000424932 CUL7Q14999 1698 aa7.47□□□□□ -1.21
CKS1BP6-201ENST00000424932 CTTNBP2Q8WZ74 1663 aa7.45□□□□□ -1.22
CKS1BP6-201ENST00000424932 FANCD2Q9BXW9 1451 aa7.45□□□□□ -1.22
CKS1BP6-201ENST00000424932 MAP3K1Q13233 1512 aa7.44□□□□□ -1.22
CKS1BP6-201ENST00000424932 ABCA10Q8WWZ4 1543 aa7.44□□□□□ -1.22
CKS1BP6-201ENST00000424932 CUX2O14529 1486 aa7.43□□□□□ -1.22
CKS1BP6-201ENST00000424932 CFAP43Q8NDM7 1665 aa7.43□□□□□ -1.22
CKS1BP6-201ENST00000424932 TOPBP1Q92547 1522 aa7.42□□□□□ -1.22
CKS1BP6-201ENST00000424932 ARHGAP35Q9NRY4 1499 aa7.42□□□□□ -1.22
CKS1BP6-201ENST00000424932 ABCA5Q8WWZ7 1642 aa7.41□□□□□ -1.22
CKS1BP6-201ENST00000424932 POLA1P09884 1462 aaPredicted RBP7.4□□□□□ -1.22
CKS1BP6-201ENST00000424932 EFCAB5A4FU69 1503 aa7.4□□□□□ -1.22
CKS1BP6-201ENST00000424932 KIF21AQ7Z4S6 1674 aa7.39□□□□□ -1.23
CKS1BP6-201ENST00000424932 TIAM1Q13009 1591 aa7.39□□□□□ -1.23
CKS1BP6-201ENST00000424932 IGF1RP08069 1367 aa7.39□□□□□ -1.23
CKS1BP6-201ENST00000424932 RRBP1Q9P2E9 1410 aaKnown RBP7.37□□□□□ -1.23
CKS1BP6-201ENST00000424932 URB2Q14146 1524 aaKnown RBP7.37□□□□□ -1.23
CKS1BP6-201ENST00000424932 CCER1Q8TC90 406 aaPredicted RBP7.36□□□□□ -1.23
CKS1BP6-201ENST00000424932 NESP48681 1621 aa7.36□□□□□ -1.23
CKS1BP6-201ENST00000424932 CARMIL1Q5VZK9 1371 aa7.35□□□□□ -1.23
CKS1BP6-201ENST00000424932 TARBP1Q13395 1621 aaKnown RBP7.35□□□□□ -1.23
CKS1BP6-201ENST00000424932 PCF11O94913 1555 aaKnown RBP7.35□□□□□ -1.23
CKS1BP6-201ENST00000424932 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.35□□□□□ -1.23
CKS1BP6-201ENST00000424932 AQRO60306 1485 aaKnown RBP eCLIP7.35□□□□□ -1.23
CKS1BP6-201ENST00000424932 PBRM1Q86U86 1689 aa7.35□□□□□ -1.23
CKS1BP6-201ENST00000424932 SAMD9Q5K651 1589 aa7.34□□□□□ -1.23
CKS1BP6-201ENST00000424932 APLP2Q06481 763 aa7.34□□□□□ -1.23
CKS1BP6-201ENST00000424932 FHAD1B1AJZ9 1412 aa7.34□□□□□ -1.23
CKS1BP6-201ENST00000424932 PDS5BQ9NTI5 1447 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms