RNA–Protein interactions for RNA: ENST00000424912.1

MEN1-211, Transcript of menin 1, humanhuman

TSL 1 (best)

Gene MEN1, Length 816 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEN1-211ENST00000424912 NISCHQ9Y2I1 1504 aa34.76■■■■□ 3.15
MEN1-211ENST00000424912 CCDC180Q9P1Z9 1646 aa30.75■■■□□ 2.51
MEN1-211ENST00000424912 ABCC9O60706 1549 aa30.3■■■□□ 2.44
MEN1-211ENST00000424912 DCAF8L2P0C7V8 631 aa29.39■■■□□ 2.3
MEN1-211ENST00000424912 RB1CC1Q8TDY2 1594 aa29.01■■■□□ 2.24
MEN1-211ENST00000424912 ZCCHC6Q5VYS8 1495 aaKnown RBP28.95■■■□□ 2.22
MEN1-211ENST00000424912 NACADO15069 1562 aa28.94■■■□□ 2.22
MEN1-211ENST00000424912 MYO15BQ96JP2 1530 aa28.66■■■□□ 2.18
MEN1-211ENST00000424912 DCAF1Q9Y4B6 1507 aa28.61■■■□□ 2.17
MEN1-211ENST00000424912 PABPN1Q86U42 306 aaKnown RBP eCLIP28.41■■■□□ 2.14
MEN1-211ENST00000424912 SCRIBQ14160 1630 aa28.32■■■□□ 2.12
MEN1-211ENST00000424912 UNC13AQ9UPW8 1703 aa28.29■■■□□ 2.12
MEN1-211ENST00000424912 BICRAQ9NZM4 1560 aa28.08■■■□□ 2.09
MEN1-211ENST00000424912 SHROOM4Q9ULL8 1493 aa27.85■■■□□ 2.05
MEN1-211ENST00000424912 DNAJC5BQ9UF47 199 aa27.68■■■□□ 2.02
MEN1-211ENST00000424912 EIF4G1Q04637 1599 aaKnown RBP27.39■■□□□ 1.98
MEN1-211ENST00000424912 CC2D2AQ9P2K1 1620 aa27.29■■□□□ 1.96
MEN1-211ENST00000424912 CECR2Q9BXF3 1484 aa27.16■■□□□ 1.94
MEN1-211ENST00000424912 SMARCA4P51532 1647 aa26.96■■□□□ 1.91
MEN1-211ENST00000424912 BAZ1AQ9NRL2 1556 aaPredicted RBP26.93■■□□□ 1.9
MEN1-211ENST00000424912 MROH2BQ7Z745 1585 aa26.85■■□□□ 1.89
MEN1-211ENST00000424912 ATAD2BQ9ULI0 1458 aa26.81■■□□□ 1.88
MEN1-211ENST00000424912 SMARCA2P51531 1590 aa26.74■■□□□ 1.87
MEN1-211ENST00000424912 NCAPD3P42695 1498 aa26.7■■□□□ 1.87
MEN1-211ENST00000424912 BAZ1BQ9UIG0 1483 aaKnown RBP26.65■■□□□ 1.86
MEN1-211ENST00000424912 WIZO95785 1651 aa26.58■■□□□ 1.85
MEN1-211ENST00000424912 HMGXB3Q12766 1538 aa26.57■■□□□ 1.84
MEN1-211ENST00000424912 PEG3Q9GZU2 1588 aa26.56■■□□□ 1.84
MEN1-211ENST00000424912 RSF1Q96T23 1441 aaPredicted RBP26.56■■□□□ 1.84
MEN1-211ENST00000424912 TOP2AP11388 1531 aaKnown RBP26.24■■□□□ 1.79
MEN1-211ENST00000424912 SUPT5HO00267 1087 aaKnown RBP26.24■■□□□ 1.79
MEN1-211ENST00000424912 NESP48681 1621 aa26.21■■□□□ 1.79
MEN1-211ENST00000424912 ERCC6Q03468 1493 aa26.12■■□□□ 1.77
MEN1-211ENST00000424912 CADPSQ9ULU8 1353 aa26.01■■□□□ 1.75
MEN1-211ENST00000424912 LAMC3Q9Y6N6 1575 aa26■■□□□ 1.75
MEN1-211ENST00000424912 CCDC88BA6NC98 1476 aa25.98■■□□□ 1.75
MEN1-211ENST00000424912 PDS5BQ9NTI5 1447 aa25.9■■□□□ 1.74
MEN1-211ENST00000424912 CFTRP13569 1480 aa25.83■■□□□ 1.73
MEN1-211ENST00000424912 KIF21AQ7Z4S6 1674 aa25.81■■□□□ 1.72
MEN1-211ENST00000424912 FANCD2Q9BXW9 1451 aa25.76■■□□□ 1.71
MEN1-211ENST00000424912 CEP164Q9UPV0 1460 aa25.72■■□□□ 1.71
MEN1-211ENST00000424912 THOC2Q8NI27 1593 aaKnown RBP25.66■■□□□ 1.7
MEN1-211ENST00000424912 MRC2Q9UBG0 1479 aa25.64■■□□□ 1.69
MEN1-211ENST00000424912 CUX2O14529 1486 aa25.63■■□□□ 1.69
MEN1-211ENST00000424912 PRDM2Q13029 1718 aa25.55■■□□□ 1.68
MEN1-211ENST00000424912 WDR62O43379 1518 aa25.48■■□□□ 1.67
MEN1-211ENST00000424912 URB2Q14146 1524 aaKnown RBP25.47■■□□□ 1.67
MEN1-211ENST00000424912 TOPBP1Q92547 1522 aa25.32■■□□□ 1.64
MEN1-211ENST00000424912 DNMBPQ6XZF7 1577 aa25.27■■□□□ 1.64
MEN1-211ENST00000424912 ABCC8Q09428 1581 aa25.25■■□□□ 1.63
MEN1-211ENST00000424912 CUX1P39880 1505 aa25.17■■□□□ 1.62
MEN1-211ENST00000424912 IFT140Q96RY7 1462 aa25.14■■□□□ 1.61
MEN1-211ENST00000424912 POLA1P09884 1462 aaPredicted RBP25.12■■□□□ 1.61
MEN1-211ENST00000424912 FGD5Q6ZNL6 1462 aa25.11■■□□□ 1.61
MEN1-211ENST00000424912 RAD54L2Q9Y4B4 1467 aa25.1■■□□□ 1.61
MEN1-211ENST00000424912 ZNF608Q9ULD9 1512 aaPredicted RBP25.08■■□□□ 1.61
MEN1-211ENST00000424912 WRNQ14191 1432 aaPredicted RBP eCLIP25.08■■□□□ 1.61
MEN1-211ENST00000424912 SOGA1O94964 1423 aa25.07■■□□□ 1.6
MEN1-211ENST00000424912 SYNJ1O43426 1573 aa25■■□□□ 1.59
MEN1-211ENST00000424912 TARBP1Q13395 1621 aaKnown RBP24.97■■□□□ 1.59
MEN1-211ENST00000424912 AQRO60306 1485 aaKnown RBP eCLIP24.97■■□□□ 1.591e-10■■■■■ 37.9
MEN1-211ENST00000424912 TDRD9Q8NDG6 1382 aaKnown RBP24.97■■□□□ 1.59
MEN1-211ENST00000424912 EIF4G3O43432 1585 aaKnown RBP24.94■■□□□ 1.58
MEN1-211ENST00000424912 TOP2BQ02880 1626 aa24.93■■□□□ 1.58
MEN1-211ENST00000424912 BIVM-ERCC5R4GMW8 1640 aa24.9■■□□□ 1.58
MEN1-211ENST00000424912 FBLN2P98095 1184 aa24.83■■□□□ 1.57
MEN1-211ENST00000424912 DNAJC5Q9H3Z4 198 aa24.8■■□□□ 1.56
MEN1-211ENST00000424912 ABCA10Q8WWZ4 1543 aa24.78■■□□□ 1.56
MEN1-211ENST00000424912 WDR97A6NE52 1622 aa24.76■■□□□ 1.55
MEN1-211ENST00000424912 GAPVD1Q14C86 1478 aa24.76■■□□□ 1.55
MEN1-211ENST00000424912 SNAPC4Q5SXM2 1469 aa24.74■■□□□ 1.55
MEN1-211ENST00000424912 GRIN2BQ13224 1484 aa24.72■■□□□ 1.55
MEN1-211ENST00000424912 OSCARQ8IYS5 282 aa24.71■■□□□ 1.55
MEN1-211ENST00000424912 TRIM41Q8WV44 630 aa24.68■■□□□ 1.54
MEN1-211ENST00000424912 CHMP7Q8WUX9 453 aaPredicted RBP24.67■■□□□ 1.54
MEN1-211ENST00000424912 ABCA5Q8WWZ7 1642 aa24.67■■□□□ 1.54
MEN1-211ENST00000424912 PBRM1Q86U86 1689 aa24.66■■□□□ 1.54
MEN1-211ENST00000424912 MAGI1Q96QZ7 1491 aaPredicted RBP24.6■■□□□ 1.53
MEN1-211ENST00000424912 CHD1O14646 1710 aa24.59■■□□□ 1.53
MEN1-211ENST00000424912 KIF27Q86VH2 1401 aa24.54■■□□□ 1.52
MEN1-211ENST00000424912 SYNJ2O15056 1496 aa24.53■■□□□ 1.52
MEN1-211ENST00000424912 ERICH3Q5RHP9 1530 aa24.48■■□□□ 1.51
MEN1-211ENST00000424912 ADAMTS12P58397 1594 aa24.47■■□□□ 1.51
MEN1-211ENST00000424912 FHAD1B1AJZ9 1412 aa24.44■■□□□ 1.5
MEN1-211ENST00000424912 RUSC2Q8N2Y8 1516 aa24.41■■□□□ 1.5
MEN1-211ENST00000424912 IGF1RP08069 1367 aa24.41■■□□□ 1.5
MEN1-211ENST00000424912 GRIN2AQ12879 1464 aa24.4■■□□□ 1.5
MEN1-211ENST00000424912 CHIC1Q5VXU3 224 aa24.38■■□□□ 1.49
MEN1-211ENST00000424912 FAM9AQ8IZU1 332 aaPredicted RBP24.33■■□□□ 1.49
MEN1-211ENST00000424912 CARMIL1Q5VZK9 1371 aa24.31■■□□□ 1.48
MEN1-211ENST00000424912 CUL7Q14999 1698 aa24.28■■□□□ 1.48
MEN1-211ENST00000424912 CLASP1Q7Z460 1538 aa24.28■■□□□ 1.48
MEN1-211ENST00000424912 CEP170Q5SW79 1584 aa24.28■■□□□ 1.48
MEN1-211ENST00000424912 ARHGEF11O15085 1522 aa24.25■■□□□ 1.47
MEN1-211ENST00000424912 RIMBP3CA6NJZ7 1639 aa24.25■■□□□ 1.47
MEN1-211ENST00000424912 RIMBP3BA6NNM3 1639 aa24.25■■□□□ 1.47
MEN1-211ENST00000424912 RIMBP3Q9UFD9 1639 aa24.25■■□□□ 1.47
MEN1-211ENST00000424912 NUP160Q12769 1436 aa24.23■■□□□ 1.47
MEN1-211ENST00000424912 CYB5RLQ6IPT4 315 aa24.18■■□□□ 1.46
MEN1-211ENST00000424912 RAPGEF2Q9Y4G8 1499 aa24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms