RNA–Protein interactions for RNA: ENST00000424908.5

CASP9-205, Transcript of caspase 9, humanhuman

TSL 3

Gene CASP9, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP9-205ENST00000424908 NISCHQ9Y2I1 1504 aa31.31■■■□□ 2.6
CASP9-205ENST00000424908 CCDC180Q9P1Z9 1646 aa27.77■■■□□ 2.04
CASP9-205ENST00000424908 ABCC9O60706 1549 aa27.21■■□□□ 1.95
CASP9-205ENST00000424908 DCAF8L2P0C7V8 631 aa26.25■■□□□ 1.79
CASP9-205ENST00000424908 RB1CC1Q8TDY2 1594 aa26.19■■□□□ 1.78
CASP9-205ENST00000424908 NACADO15069 1562 aa26.17■■□□□ 1.78
CASP9-205ENST00000424908 ZCCHC6Q5VYS8 1495 aaKnown RBP26.08■■□□□ 1.77
CASP9-205ENST00000424908 MYO15BQ96JP2 1530 aa26.04■■□□□ 1.76
CASP9-205ENST00000424908 DCAF1Q9Y4B6 1507 aa25.93■■□□□ 1.74
CASP9-205ENST00000424908 PABPN1Q86U42 306 aaKnown RBP eCLIP25.47■■□□□ 1.67
CASP9-205ENST00000424908 UNC13AQ9UPW8 1703 aa25.41■■□□□ 1.66
CASP9-205ENST00000424908 SCRIBQ14160 1630 aa25.35■■□□□ 1.65
CASP9-205ENST00000424908 BICRAQ9NZM4 1560 aa25.33■■□□□ 1.65
CASP9-205ENST00000424908 SHROOM4Q9ULL8 1493 aa25.17■■□□□ 1.62
CASP9-205ENST00000424908 DNAJC5BQ9UF47 199 aa24.95■■□□□ 1.58
CASP9-205ENST00000424908 EIF4G1Q04637 1599 aaKnown RBP24.7■■□□□ 1.54
CASP9-205ENST00000424908 CC2D2AQ9P2K1 1620 aa24.57■■□□□ 1.52
CASP9-205ENST00000424908 CECR2Q9BXF3 1484 aa24.47■■□□□ 1.51
CASP9-205ENST00000424908 BAZ1AQ9NRL2 1556 aaPredicted RBP24.29■■□□□ 1.48
CASP9-205ENST00000424908 SMARCA4P51532 1647 aa24.25■■□□□ 1.47
CASP9-205ENST00000424908 NCAPD3P42695 1498 aa24.18■■□□□ 1.46
CASP9-205ENST00000424908 ATAD2BQ9ULI0 1458 aa24.17■■□□□ 1.46
CASP9-205ENST00000424908 SMARCA2P51531 1590 aa24.16■■□□□ 1.46
CASP9-205ENST00000424908 MROH2BQ7Z745 1585 aa24.11■■□□□ 1.45
CASP9-205ENST00000424908 PEG3Q9GZU2 1588 aa24.03■■□□□ 1.44
CASP9-205ENST00000424908 HMGXB3Q12766 1538 aa24.02■■□□□ 1.44
CASP9-205ENST00000424908 BAZ1BQ9UIG0 1483 aaKnown RBP23.99■■□□□ 1.43
CASP9-205ENST00000424908 RSF1Q96T23 1441 aaPredicted RBP23.89■■□□□ 1.41
CASP9-205ENST00000424908 WIZO95785 1651 aa23.8■■□□□ 1.4
CASP9-205ENST00000424908 TOP2AP11388 1531 aaKnown RBP23.61■■□□□ 1.37
CASP9-205ENST00000424908 NESP48681 1621 aa23.52■■□□□ 1.36
CASP9-205ENST00000424908 ERCC6Q03468 1493 aa23.5■■□□□ 1.35
CASP9-205ENST00000424908 LAMC3Q9Y6N6 1575 aa23.49■■□□□ 1.35
CASP9-205ENST00000424908 CADPSQ9ULU8 1353 aa23.49■■□□□ 1.35
CASP9-205ENST00000424908 PDS5BQ9NTI5 1447 aa23.42■■□□□ 1.34
CASP9-205ENST00000424908 CCDC88BA6NC98 1476 aa23.35■■□□□ 1.33
CASP9-205ENST00000424908 SUPT5HO00267 1087 aaKnown RBP23.34■■□□□ 1.33
CASP9-205ENST00000424908 CFTRP13569 1480 aa23.33■■□□□ 1.33
CASP9-205ENST00000424908 CUX2O14529 1486 aa23.23■■□□□ 1.31
CASP9-205ENST00000424908 FANCD2Q9BXW9 1451 aa23.19■■□□□ 1.3
CASP9-205ENST00000424908 KIF21AQ7Z4S6 1674 aa23.17■■□□□ 1.3
CASP9-205ENST00000424908 CEP164Q9UPV0 1460 aa23.17■■□□□ 1.3
CASP9-205ENST00000424908 THOC2Q8NI27 1593 aaKnown RBP23.13■■□□□ 1.29
CASP9-205ENST00000424908 MRC2Q9UBG0 1479 aa23.12■■□□□ 1.29
CASP9-205ENST00000424908 WDR62O43379 1518 aa23.02■■□□□ 1.28
CASP9-205ENST00000424908 PRDM2Q13029 1718 aa22.99■■□□□ 1.27
CASP9-205ENST00000424908 URB2Q14146 1524 aaKnown RBP22.92■■□□□ 1.26
CASP9-205ENST00000424908 ABCC8Q09428 1581 aa22.86■■□□□ 1.25
CASP9-205ENST00000424908 TOPBP1Q92547 1522 aa22.8■■□□□ 1.24
CASP9-205ENST00000424908 DNMBPQ6XZF7 1577 aa22.76■■□□□ 1.23
CASP9-205ENST00000424908 IFT140Q96RY7 1462 aa22.69■■□□□ 1.22
CASP9-205ENST00000424908 CUX1P39880 1505 aa22.62■■□□□ 1.21
CASP9-205ENST00000424908 POLA1P09884 1462 aaPredicted RBP22.61■■□□□ 1.21
CASP9-205ENST00000424908 SOGA1O94964 1423 aa22.57■■□□□ 1.2
CASP9-205ENST00000424908 FGD5Q6ZNL6 1462 aa22.56■■□□□ 1.2
CASP9-205ENST00000424908 WRNQ14191 1432 aaPredicted RBP eCLIP22.55■■□□□ 1.2
CASP9-205ENST00000424908 ZNF608Q9ULD9 1512 aaPredicted RBP22.53■■□□□ 1.2
CASP9-205ENST00000424908 DNAJC5Q9H3Z4 198 aa22.53■■□□□ 1.2
CASP9-205ENST00000424908 RAD54L2Q9Y4B4 1467 aa22.51■■□□□ 1.19
CASP9-205ENST00000424908 TARBP1Q13395 1621 aaKnown RBP22.5■■□□□ 1.19
CASP9-205ENST00000424908 AQRO60306 1485 aaKnown RBP eCLIP22.44■■□□□ 1.186e-6■■■■□ 25.1
CASP9-205ENST00000424908 TOP2BQ02880 1626 aa22.43■■□□□ 1.18
CASP9-205ENST00000424908 TDRD9Q8NDG6 1382 aaKnown RBP22.43■■□□□ 1.18
CASP9-205ENST00000424908 EIF4G3O43432 1585 aaKnown RBP22.42■■□□□ 1.18
CASP9-205ENST00000424908 SYNJ1O43426 1573 aa22.4■■□□□ 1.18
CASP9-205ENST00000424908 BIVM-ERCC5R4GMW8 1640 aa22.39■■□□□ 1.17
CASP9-205ENST00000424908 WDR97A6NE52 1622 aa22.38■■□□□ 1.17
CASP9-205ENST00000424908 ABCA10Q8WWZ4 1543 aa22.36■■□□□ 1.17
CASP9-205ENST00000424908 OSCARQ8IYS5 282 aa22.34■■□□□ 1.17
CASP9-205ENST00000424908 GRIN2BQ13224 1484 aa22.29■■□□□ 1.16
CASP9-205ENST00000424908 GAPVD1Q14C86 1478 aa22.29■■□□□ 1.16
CASP9-205ENST00000424908 FBLN2P98095 1184 aa22.24■■□□□ 1.15
CASP9-205ENST00000424908 SNAPC4Q5SXM2 1469 aa22.22■■□□□ 1.15
CASP9-205ENST00000424908 MAGI1Q96QZ7 1491 aaPredicted RBP22.22■■□□□ 1.15
CASP9-205ENST00000424908 ABCA5Q8WWZ7 1642 aa22.2■■□□□ 1.15
CASP9-205ENST00000424908 CHMP7Q8WUX9 453 aaPredicted RBP22.19■■□□□ 1.14
CASP9-205ENST00000424908 SYNJ2O15056 1496 aa22.14■■□□□ 1.13
CASP9-205ENST00000424908 PBRM1Q86U86 1689 aa22.11■■□□□ 1.13
CASP9-205ENST00000424908 KIF27Q86VH2 1401 aa22.1■■□□□ 1.13
CASP9-205ENST00000424908 TRIM41Q8WV44 630 aa22.09■■□□□ 1.13
CASP9-205ENST00000424908 ERICH3Q5RHP9 1530 aa22.09■■□□□ 1.13
CASP9-205ENST00000424908 CHD1O14646 1710 aa22.07■■□□□ 1.12
CASP9-205ENST00000424908 FHAD1B1AJZ9 1412 aa22.05■■□□□ 1.12
CASP9-205ENST00000424908 ADAMTS12P58397 1594 aa22■■□□□ 1.11
CASP9-205ENST00000424908 IGF1RP08069 1367 aa21.99■■□□□ 1.11
CASP9-205ENST00000424908 GRIN2AQ12879 1464 aa21.98■■□□□ 1.11
CASP9-205ENST00000424908 CLASP1Q7Z460 1538 aa21.9■■□□□ 1.1
CASP9-205ENST00000424908 NUP160Q12769 1436 aa21.89■■□□□ 1.09
CASP9-205ENST00000424908 ARHGEF11O15085 1522 aa21.87■■□□□ 1.09
CASP9-205ENST00000424908 CARMIL1Q5VZK9 1371 aa21.87■■□□□ 1.09
CASP9-205ENST00000424908 CUL7Q14999 1698 aa21.86■■□□□ 1.09
CASP9-205ENST00000424908 RIMBP3CA6NJZ7 1639 aa21.83■■□□□ 1.08
CASP9-205ENST00000424908 RIMBP3BA6NNM3 1639 aa21.83■■□□□ 1.08
CASP9-205ENST00000424908 RIMBP3Q9UFD9 1639 aa21.83■■□□□ 1.08
CASP9-205ENST00000424908 CEP170Q5SW79 1584 aa21.82■■□□□ 1.08
CASP9-205ENST00000424908 RUSC2Q8N2Y8 1516 aa21.8■■□□□ 1.08
CASP9-205ENST00000424908 CHIC1Q5VXU3 224 aa21.78■■□□□ 1.08
CASP9-205ENST00000424908 CYB5RLQ6IPT4 315 aa21.75■■□□□ 1.07
CASP9-205ENST00000424908 RAPGEF2Q9Y4G8 1499 aa21.72■■□□□ 1.07
CASP9-205ENST00000424908 JPH4Q96JJ6 628 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms