RNA–Protein interactions for RNA: ENST00000424864.1

YKT6-203, Transcript of YKT6 v-SNARE homolog, humanhuman

TSL 5

Gene YKT6, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YKT6-203ENST00000424864 NISCHQ9Y2I1 1504 aa28.46■■■□□ 2.15
YKT6-203ENST00000424864 CCDC180Q9P1Z9 1646 aa24.87■■□□□ 1.57
YKT6-203ENST00000424864 ZCCHC6Q5VYS8 1495 aaKnown RBP23.94■■□□□ 1.42
YKT6-203ENST00000424864 DCAF1Q9Y4B6 1507 aa23.59■■□□□ 1.37
YKT6-203ENST00000424864 DCAF8L2P0C7V8 631 aa23.35■■□□□ 1.33
YKT6-203ENST00000424864 ABCC9O60706 1549 aa23.29■■□□□ 1.32
YKT6-203ENST00000424864 MYO15BQ96JP2 1530 aa23.29■■□□□ 1.32
YKT6-203ENST00000424864 SHROOM4Q9ULL8 1493 aa23.17■■□□□ 1.3
YKT6-203ENST00000424864 NACADO15069 1562 aa23.1■■□□□ 1.29
YKT6-203ENST00000424864 RB1CC1Q8TDY2 1594 aa22.89■■□□□ 1.25
YKT6-203ENST00000424864 SCRIBQ14160 1630 aa22.79■■□□□ 1.24
YKT6-203ENST00000424864 UNC13AQ9UPW8 1703 aa22.4■■□□□ 1.18
YKT6-203ENST00000424864 SUPT5HO00267 1087 aaKnown RBP22.34■■□□□ 1.17
YKT6-203ENST00000424864 BICRAQ9NZM4 1560 aa22.13■■□□□ 1.13
YKT6-203ENST00000424864 RSF1Q96T23 1441 aaPredicted RBP22.07■■□□□ 1.12
YKT6-203ENST00000424864 CECR2Q9BXF3 1484 aa22.04■■□□□ 1.12
YKT6-203ENST00000424864 BAZ1AQ9NRL2 1556 aaPredicted RBP22■■□□□ 1.11
YKT6-203ENST00000424864 MROH2BQ7Z745 1585 aa21.95■■□□□ 1.11
YKT6-203ENST00000424864 PABPN1Q86U42 306 aaKnown RBP eCLIP21.92■■□□□ 1.1
YKT6-203ENST00000424864 SMARCA4P51532 1647 aa21.88■■□□□ 1.09
YKT6-203ENST00000424864 AEBP2Q6ZN18 517 aaPredicted RBP21.86■■□□□ 1.09
YKT6-203ENST00000424864 WIZO95785 1651 aa21.8■■□□□ 1.08
YKT6-203ENST00000424864 PEG3Q9GZU2 1588 aa21.63■■□□□ 1.05
YKT6-203ENST00000424864 TOP2AP11388 1531 aaKnown RBP21.63■■□□□ 1.05
YKT6-203ENST00000424864 SMARCA2P51531 1590 aa21.51■■□□□ 1.03
YKT6-203ENST00000424864 EIF4G1Q04637 1599 aaKnown RBP21.47■■□□□ 1.03
YKT6-203ENST00000424864 ATAD2BQ9ULI0 1458 aa21.46■■□□□ 1.03
YKT6-203ENST00000424864 CHIC1Q5VXU3 224 aa21.45■■□□□ 1.02
YKT6-203ENST00000424864 BAZ1BQ9UIG0 1483 aaKnown RBP21.37■■□□□ 1.01
YKT6-203ENST00000424864 CCDC88BA6NC98 1476 aa21.34■■□□□ 1.01
YKT6-203ENST00000424864 HMGXB3Q12766 1538 aa21.3■■□□□ 1
YKT6-203ENST00000424864 NCAPD3P42695 1498 aa21.27■■□□□ 1
YKT6-203ENST00000424864 CC2D2AQ9P2K1 1620 aa21.12■□□□□ 0.97
YKT6-203ENST00000424864 TRIM41Q8WV44 630 aa21.05■□□□□ 0.96
YKT6-203ENST00000424864 ABCC8Q09428 1581 aa20.91■□□□□ 0.94
YKT6-203ENST00000424864 PRDM2Q13029 1718 aa20.83■□□□□ 0.92
YKT6-203ENST00000424864 CFTRP13569 1480 aa20.82■□□□□ 0.92
YKT6-203ENST00000424864 WRNQ14191 1432 aaPredicted RBP eCLIP20.8■□□□□ 0.92
YKT6-203ENST00000424864 SYNJ1O43426 1573 aa20.72■□□□□ 0.91
YKT6-203ENST00000424864 CADPSQ9ULU8 1353 aa20.72■□□□□ 0.91
YKT6-203ENST00000424864 TOP2BQ02880 1626 aa20.66■□□□□ 0.9
YKT6-203ENST00000424864 BIVM-ERCC5R4GMW8 1640 aa20.66■□□□□ 0.9
YKT6-203ENST00000424864 EEA1Q15075 1411 aa20.61■□□□□ 0.89
YKT6-203ENST00000424864 FAM9AQ8IZU1 332 aaPredicted RBP20.6■□□□□ 0.89
YKT6-203ENST00000424864 LOC105371045A0A1W2PR82 267 aa20.58■□□□□ 0.89
YKT6-203ENST00000424864 LAMC3Q9Y6N6 1575 aa20.58■□□□□ 0.88
YKT6-203ENST00000424864 CUX1P39880 1505 aa20.54■□□□□ 0.88
YKT6-203ENST00000424864 SOGA1O94964 1423 aa20.52■□□□□ 0.87
YKT6-203ENST00000424864 FANCD2Q9BXW9 1451 aa20.5■□□□□ 0.87
YKT6-203ENST00000424864 NESP48681 1621 aa20.46■□□□□ 0.87
YKT6-203ENST00000424864 RUSC2Q8N2Y8 1516 aa20.42■□□□□ 0.86
YKT6-203ENST00000424864 CSRNP3Q8WYN3 585 aa20.4■□□□□ 0.86
YKT6-203ENST00000424864 CEP164Q9UPV0 1460 aa20.39■□□□□ 0.85
YKT6-203ENST00000424864 DNMBPQ6XZF7 1577 aa20.38■□□□□ 0.85
YKT6-203ENST00000424864 PDS5BQ9NTI5 1447 aa20.38■□□□□ 0.85
YKT6-203ENST00000424864 DNAJC5BQ9UF47 199 aa20.38■□□□□ 0.85
YKT6-203ENST00000424864 KIF21BO75037 1637 aa20.35■□□□□ 0.85
YKT6-203ENST00000424864 FGD5Q6ZNL6 1462 aa20.31■□□□□ 0.84
YKT6-203ENST00000424864 GOLGA3Q08378 1498 aa20.3■□□□□ 0.84
YKT6-203ENST00000424864 TOPBP1Q92547 1522 aa20.3■□□□□ 0.84
YKT6-203ENST00000424864 KIF21AQ7Z4S6 1674 aa20.29■□□□□ 0.84
YKT6-203ENST00000424864 KIF27Q86VH2 1401 aa20.29■□□□□ 0.84
YKT6-203ENST00000424864 EHMT2Q96KQ7 1210 aa20.26■□□□□ 0.83
YKT6-203ENST00000424864 TNIKQ9UKE5 1360 aa20.23■□□□□ 0.83
YKT6-203ENST00000424864 URB2Q14146 1524 aaKnown RBP20.23■□□□□ 0.83
YKT6-203ENST00000424864 CUX2O14529 1486 aa20.19■□□□□ 0.82
YKT6-203ENST00000424864 POLA1P09884 1462 aaPredicted RBP20.19■□□□□ 0.82
YKT6-203ENST00000424864 ERICH3Q5RHP9 1530 aa20.19■□□□□ 0.82
YKT6-203ENST00000424864 PRXQ9BXM0 1461 aa20.16■□□□□ 0.82
YKT6-203ENST00000424864 ABCA10Q8WWZ4 1543 aa20.15■□□□□ 0.82
YKT6-203ENST00000424864 MRC2Q9UBG0 1479 aa20.13■□□□□ 0.81
YKT6-203ENST00000424864 UBTFP17480 764 aaKnown RBP20.13■□□□□ 0.81
YKT6-203ENST00000424864 RAPGEF2Q9Y4G8 1499 aa20.12■□□□□ 0.81
YKT6-203ENST00000424864 CEP162Q5TB80 1403 aa20.12■□□□□ 0.81
YKT6-203ENST00000424864 WDR97A6NE52 1622 aa20.11■□□□□ 0.81
YKT6-203ENST00000424864 RAD54L2Q9Y4B4 1467 aa20.09■□□□□ 0.81
YKT6-203ENST00000424864 IGF1RP08069 1367 aa20.04■□□□□ 0.8
YKT6-203ENST00000424864 WDR62O43379 1518 aa20.02■□□□□ 0.8
YKT6-203ENST00000424864 ERCC6Q03468 1493 aa20■□□□□ 0.79
YKT6-203ENST00000424864 TARBP1Q13395 1621 aaKnown RBP20■□□□□ 0.79
YKT6-203ENST00000424864 ABCA5Q8WWZ7 1642 aa20■□□□□ 0.79
YKT6-203ENST00000424864 CUL7Q14999 1698 aa20■□□□□ 0.79
YKT6-203ENST00000424864 CARMIL1Q5VZK9 1371 aa19.95■□□□□ 0.79
YKT6-203ENST00000424864 CLIP1P30622 1438 aa19.95■□□□□ 0.78
YKT6-203ENST00000424864 THOC2Q8NI27 1593 aaKnown RBP19.94■□□□□ 0.78
YKT6-203ENST00000424864 GAPVD1Q14C86 1478 aa19.92■□□□□ 0.78
YKT6-203ENST00000424864 IFT140Q96RY7 1462 aa19.9■□□□□ 0.78
YKT6-203ENST00000424864 TDRD9Q8NDG6 1382 aaKnown RBP19.88■□□□□ 0.77
YKT6-203ENST00000424864 PBRM1Q86U86 1689 aa19.85■□□□□ 0.77
YKT6-203ENST00000424864 TRIM26Q12899 539 aaPredicted RBP19.81■□□□□ 0.76
YKT6-203ENST00000424864 VPS8Q8N3P4 1428 aa19.81■□□□□ 0.76
YKT6-203ENST00000424864 CTTNBP2Q8WZ74 1663 aa19.78■□□□□ 0.76
YKT6-203ENST00000424864 GRIN2BQ13224 1484 aa19.77■□□□□ 0.76
YKT6-203ENST00000424864 PCGF6Q9BYE7 350 aa19.76■□□□□ 0.75
YKT6-203ENST00000424864 ADAMTS12P58397 1594 aa19.74■□□□□ 0.75
YKT6-203ENST00000424864 AQRO60306 1485 aaKnown RBP eCLIP19.73■□□□□ 0.75
YKT6-203ENST00000424864 ARAP1Q96P48 1450 aa19.73■□□□□ 0.75
YKT6-203ENST00000424864 EIF4G3O43432 1585 aaKnown RBP19.73■□□□□ 0.75
YKT6-203ENST00000424864 FHAD1B1AJZ9 1412 aa19.72■□□□□ 0.75
YKT6-203ENST00000424864 ZNF608Q9ULD9 1512 aaPredicted RBP19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms