RNA–Protein interactions for RNA: ENST00000424751.2

LINC00839-201, long intergenic non-protein coding RNA 839, humanhuman

TSL 2

Gene LINC00839, Length 2,252 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00839-201ENST00000424751 NISCHQ9Y2I1 1504 aa32.12■■■□□ 2.73
LINC00839-201ENST00000424751 CCDC180Q9P1Z9 1646 aa27.83■■■□□ 2.05
LINC00839-201ENST00000424751 ZCCHC6Q5VYS8 1495 aaKnown RBP26.96■■□□□ 1.91
LINC00839-201ENST00000424751 DCAF8L2P0C7V8 631 aa26.86■■□□□ 1.89
LINC00839-201ENST00000424751 ABCC9O60706 1549 aa26.74■■□□□ 1.87
LINC00839-201ENST00000424751 SHROOM4Q9ULL8 1493 aa26.62■■□□□ 1.85
LINC00839-201ENST00000424751 DCAF1Q9Y4B6 1507 aa26.31■■□□□ 1.8
LINC00839-201ENST00000424751 SCRIBQ14160 1630 aa25.95■■□□□ 1.75
LINC00839-201ENST00000424751 MYO15BQ96JP2 1530 aa25.94■■□□□ 1.74
LINC00839-201ENST00000424751 NACADO15069 1562 aa25.94■■□□□ 1.74
LINC00839-201ENST00000424751 RB1CC1Q8TDY2 1594 aa25.77■■□□□ 1.72
LINC00839-201ENST00000424751 UNC13AQ9UPW8 1703 aa25.55■■□□□ 1.68
LINC00839-201ENST00000424751 SUPT5HO00267 1087 aaKnown RBP25.51■■□□□ 1.67
LINC00839-201ENST00000424751 PABPN1Q86U42 306 aaKnown RBP eCLIP25.33■■□□□ 1.65
LINC00839-201ENST00000424751 BICRAQ9NZM4 1560 aa25.23■■□□□ 1.63
LINC00839-201ENST00000424751 CECR2Q9BXF3 1484 aa25.2■■□□□ 1.62
LINC00839-201ENST00000424751 RSF1Q96T23 1441 aaPredicted RBP25■■□□□ 1.59
LINC00839-201ENST00000424751 MROH2BQ7Z745 1585 aa24.98■■□□□ 1.59
LINC00839-201ENST00000424751 WIZO95785 1651 aa24.82■■□□□ 1.56
LINC00839-201ENST00000424751 SMARCA4P51532 1647 aa24.72■■□□□ 1.55
LINC00839-201ENST00000424751 BAZ1AQ9NRL2 1556 aaPredicted RBP24.71■■□□□ 1.55
LINC00839-201ENST00000424751 EIF4G1Q04637 1599 aaKnown RBP24.39■■□□□ 1.5
LINC00839-201ENST00000424751 ATAD2BQ9ULI0 1458 aa24.32■■□□□ 1.48
LINC00839-201ENST00000424751 TOP2AP11388 1531 aaKnown RBP24.32■■□□□ 1.48
LINC00839-201ENST00000424751 CHIC1Q5VXU3 224 aa24.29■■□□□ 1.48
LINC00839-201ENST00000424751 PEG3Q9GZU2 1588 aa24.27■■□□□ 1.48
LINC00839-201ENST00000424751 CCDC88BA6NC98 1476 aa24.22■■□□□ 1.47
LINC00839-201ENST00000424751 SMARCA2P51531 1590 aa24.2■■□□□ 1.47
LINC00839-201ENST00000424751 BAZ1BQ9UIG0 1483 aaKnown RBP24.15■■□□□ 1.46
LINC00839-201ENST00000424751 CC2D2AQ9P2K1 1620 aa24.09■■□□□ 1.45
LINC00839-201ENST00000424751 NCAPD3P42695 1498 aa24.01■■□□□ 1.43
LINC00839-201ENST00000424751 DNAJC5BQ9UF47 199 aa23.93■■□□□ 1.42
LINC00839-201ENST00000424751 HMGXB3Q12766 1538 aa23.92■■□□□ 1.42
LINC00839-201ENST00000424751 ABCC8Q09428 1581 aa23.86■■□□□ 1.41
LINC00839-201ENST00000424751 TRIM41Q8WV44 630 aa23.77■■□□□ 1.4
LINC00839-201ENST00000424751 FAM9AQ8IZU1 332 aaPredicted RBP23.63■■□□□ 1.37
LINC00839-201ENST00000424751 LOC105371045A0A1W2PR82 267 aa23.58■■□□□ 1.36
LINC00839-201ENST00000424751 NESP48681 1621 aa23.54■■□□□ 1.36
LINC00839-201ENST00000424751 CFTRP13569 1480 aa23.52■■□□□ 1.36
LINC00839-201ENST00000424751 EHMT2Q96KQ7 1210 aa23.51■■□□□ 1.35
LINC00839-201ENST00000424751 SYNJ1O43426 1573 aa23.51■■□□□ 1.35
LINC00839-201ENST00000424751 WRNQ14191 1432 aaPredicted RBP eCLIP23.46■■□□□ 1.35
LINC00839-201ENST00000424751 CADPSQ9ULU8 1353 aa23.45■■□□□ 1.34
LINC00839-201ENST00000424751 RUSC2Q8N2Y8 1516 aa23.38■■□□□ 1.33
LINC00839-201ENST00000424751 SOGA1O94964 1423 aa23.37■■□□□ 1.33
LINC00839-201ENST00000424751 PRDM2Q13029 1718 aa23.35■■□□□ 1.33
LINC00839-201ENST00000424751 CUX1P39880 1505 aa23.32■■□□□ 1.32
LINC00839-201ENST00000424751 FANCD2Q9BXW9 1451 aa23.25■■□□□ 1.31
LINC00839-201ENST00000424751 TOP2BQ02880 1626 aa23.24■■□□□ 1.31
LINC00839-201ENST00000424751 BIVM-ERCC5R4GMW8 1640 aa23.21■■□□□ 1.31
LINC00839-201ENST00000424751 LAMC3Q9Y6N6 1575 aa23.16■■□□□ 1.3
LINC00839-201ENST00000424751 HRCP23327 699 aa23.15■■□□□ 1.3
LINC00839-201ENST00000424751 KIF21AQ7Z4S6 1674 aa23.15■■□□□ 1.3
LINC00839-201ENST00000424751 URB2Q14146 1524 aaKnown RBP23.04■■□□□ 1.28
LINC00839-201ENST00000424751 CEP164Q9UPV0 1460 aa23.04■■□□□ 1.28
LINC00839-201ENST00000424751 FGD5Q6ZNL6 1462 aa23.04■■□□□ 1.28
LINC00839-201ENST00000424751 CSRNP3Q8WYN3 585 aa23.01■■□□□ 1.27
LINC00839-201ENST00000424751 TOPBP1Q92547 1522 aa23.01■■□□□ 1.27
LINC00839-201ENST00000424751 RAD54L2Q9Y4B4 1467 aa22.98■■□□□ 1.27
LINC00839-201ENST00000424751 PDS5BQ9NTI5 1447 aa22.98■■□□□ 1.27
LINC00839-201ENST00000424751 DNMBPQ6XZF7 1577 aa22.96■■□□□ 1.27
LINC00839-201ENST00000424751 POLA1P09884 1462 aaPredicted RBP22.91■■□□□ 1.26
LINC00839-201ENST00000424751 CUX2O14529 1486 aa22.88■■□□□ 1.25
LINC00839-201ENST00000424751 EEA1Q15075 1411 aa22.86■■□□□ 1.25
LINC00839-201ENST00000424751 RAPGEF2Q9Y4G8 1499 aa22.84■■□□□ 1.25
LINC00839-201ENST00000424751 UBTFP17480 764 aaKnown RBP22.8■■□□□ 1.24
LINC00839-201ENST00000424751 KIF27Q86VH2 1401 aa22.79■■□□□ 1.24
LINC00839-201ENST00000424751 PCGF6Q9BYE7 350 aa22.78■■□□□ 1.24
LINC00839-201ENST00000424751 ERCC6Q03468 1493 aa22.76■■□□□ 1.23
LINC00839-201ENST00000424751 MRC2Q9UBG0 1479 aa22.76■■□□□ 1.23
LINC00839-201ENST00000424751 KIF21BO75037 1637 aa22.74■■□□□ 1.23
LINC00839-201ENST00000424751 RANGAP1P46060 587 aaPredicted RBP22.74■■□□□ 1.23
LINC00839-201ENST00000424751 TDRD9Q8NDG6 1382 aaKnown RBP22.74■■□□□ 1.23
LINC00839-201ENST00000424751 GOLGA3Q08378 1498 aa22.74■■□□□ 1.23
LINC00839-201ENST00000424751 IGF1RP08069 1367 aa22.73■■□□□ 1.23
LINC00839-201ENST00000424751 WDR97A6NE52 1622 aa22.71■■□□□ 1.23
LINC00839-201ENST00000424751 ABCA10Q8WWZ4 1543 aa22.71■■□□□ 1.23
LINC00839-201ENST00000424751 PRXQ9BXM0 1461 aa22.7■■□□□ 1.22
LINC00839-201ENST00000424751 TARBP1Q13395 1621 aaKnown RBP22.68■■□□□ 1.22
LINC00839-201ENST00000424751 THOC2Q8NI27 1593 aaKnown RBP22.68■■□□□ 1.22
LINC00839-201ENST00000424751 TNIKQ9UKE5 1360 aa22.66■■□□□ 1.22
LINC00839-201ENST00000424751 CEP162Q5TB80 1403 aa22.66■■□□□ 1.22
LINC00839-201ENST00000424751 WDR62O43379 1518 aa22.64■■□□□ 1.22
LINC00839-201ENST00000424751 PPARGC1BQ86YN6 1023 aaKnown RBP22.62■■□□□ 1.21
LINC00839-201ENST00000424751 ZNF608Q9ULD9 1512 aaPredicted RBP22.6■■□□□ 1.21
LINC00839-201ENST00000424751 AQRO60306 1485 aaKnown RBP eCLIP22.6■■□□□ 1.215e-6■■□□□ 14.3
LINC00839-201ENST00000424751 ABCA5Q8WWZ7 1642 aa22.58■■□□□ 1.21
LINC00839-201ENST00000424751 CARMIL1Q5VZK9 1371 aa22.56■■□□□ 1.2
LINC00839-201ENST00000424751 ERICH3Q5RHP9 1530 aa22.54■■□□□ 1.2
LINC00839-201ENST00000424751 GAPVD1Q14C86 1478 aa22.54■■□□□ 1.2
LINC00839-201ENST00000424751 CLIP1P30622 1438 aa22.45■■□□□ 1.19
LINC00839-201ENST00000424751 PBRM1Q86U86 1689 aa22.45■■□□□ 1.18
LINC00839-201ENST00000424751 TTBK1Q5TCY1 1321 aaPredicted RBP22.43■■□□□ 1.18
LINC00839-201ENST00000424751 IFT140Q96RY7 1462 aa22.43■■□□□ 1.18
LINC00839-201ENST00000424751 EIF4G3O43432 1585 aaKnown RBP22.39■■□□□ 1.18
LINC00839-201ENST00000424751 CUL7Q14999 1698 aa22.37■■□□□ 1.17
LINC00839-201ENST00000424751 ARAP1Q96P48 1450 aa22.32■■□□□ 1.16
LINC00839-201ENST00000424751 TRIM26Q12899 539 aaPredicted RBP22.32■■□□□ 1.16
LINC00839-201ENST00000424751 P3H3Q8IVL6 736 aa22.31■■□□□ 1.16
LINC00839-201ENST00000424751 ARHGAP35Q9NRY4 1499 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms