RNA–Protein interactions for RNA: ENST00000424714.1

PITRM1-204, Transcript of pitrilysin metallopeptidase 1, humanhuman

TSL 3

Gene PITRM1, Length 482 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITRM1-204ENST00000424714 NISCHQ9Y2I1 1504 aa32.07■■■□□ 2.72
PITRM1-204ENST00000424714 CCDC180Q9P1Z9 1646 aa28.42■■■□□ 2.14
PITRM1-204ENST00000424714 ABCC9O60706 1549 aa27.68■■■□□ 2.02
PITRM1-204ENST00000424714 DCAF8L2P0C7V8 631 aa26.78■■□□□ 1.88
PITRM1-204ENST00000424714 ZCCHC6Q5VYS8 1495 aaKnown RBP26.74■■□□□ 1.87
PITRM1-204ENST00000424714 NACADO15069 1562 aa26.72■■□□□ 1.87
PITRM1-204ENST00000424714 RB1CC1Q8TDY2 1594 aa26.71■■□□□ 1.87
PITRM1-204ENST00000424714 MYO15BQ96JP2 1530 aa26.63■■□□□ 1.85
PITRM1-204ENST00000424714 DCAF1Q9Y4B6 1507 aa26.56■■□□□ 1.84
PITRM1-204ENST00000424714 UNC13AQ9UPW8 1703 aa25.98■■□□□ 1.75
PITRM1-204ENST00000424714 SCRIBQ14160 1630 aa25.95■■□□□ 1.74
PITRM1-204ENST00000424714 PABPN1Q86U42 306 aaKnown RBP eCLIP25.91■■□□□ 1.74
PITRM1-204ENST00000424714 BICRAQ9NZM4 1560 aa25.83■■□□□ 1.73
PITRM1-204ENST00000424714 DNAJC5BQ9UF47 199 aa25.69■■□□□ 1.7
PITRM1-204ENST00000424714 SHROOM4Q9ULL8 1493 aa25.68■■□□□ 1.7
PITRM1-204ENST00000424714 EIF4G1Q04637 1599 aaKnown RBP25.18■■□□□ 1.62
PITRM1-204ENST00000424714 CC2D2AQ9P2K1 1620 aa25.02■■□□□ 1.6
PITRM1-204ENST00000424714 CECR2Q9BXF3 1484 aa24.94■■□□□ 1.58
PITRM1-204ENST00000424714 BAZ1AQ9NRL2 1556 aaPredicted RBP24.87■■□□□ 1.57
PITRM1-204ENST00000424714 SMARCA4P51532 1647 aa24.83■■□□□ 1.57
PITRM1-204ENST00000424714 MROH2BQ7Z745 1585 aa24.7■■□□□ 1.54
PITRM1-204ENST00000424714 ATAD2BQ9ULI0 1458 aa24.69■■□□□ 1.54
PITRM1-204ENST00000424714 SMARCA2P51531 1590 aa24.68■■□□□ 1.54
PITRM1-204ENST00000424714 NCAPD3P42695 1498 aa24.66■■□□□ 1.54
PITRM1-204ENST00000424714 PEG3Q9GZU2 1588 aa24.6■■□□□ 1.53
PITRM1-204ENST00000424714 HMGXB3Q12766 1538 aa24.55■■□□□ 1.52
PITRM1-204ENST00000424714 BAZ1BQ9UIG0 1483 aaKnown RBP24.51■■□□□ 1.51
PITRM1-204ENST00000424714 RSF1Q96T23 1441 aaPredicted RBP24.5■■□□□ 1.51
PITRM1-204ENST00000424714 WIZO95785 1651 aa24.41■■□□□ 1.5
PITRM1-204ENST00000424714 TOP2AP11388 1531 aaKnown RBP24.21■■□□□ 1.47
PITRM1-204ENST00000424714 SUPT5HO00267 1087 aaKnown RBP24.02■■□□□ 1.44
PITRM1-204ENST00000424714 LAMC3Q9Y6N6 1575 aa23.98■■□□□ 1.43
PITRM1-204ENST00000424714 NESP48681 1621 aa23.97■■□□□ 1.43
PITRM1-204ENST00000424714 CADPSQ9ULU8 1353 aa23.97■■□□□ 1.43
PITRM1-204ENST00000424714 CCDC88BA6NC98 1476 aa23.93■■□□□ 1.42
PITRM1-204ENST00000424714 ERCC6Q03468 1493 aa23.89■■□□□ 1.42
PITRM1-204ENST00000424714 PDS5BQ9NTI5 1447 aa23.86■■□□□ 1.41
PITRM1-204ENST00000424714 CFTRP13569 1480 aa23.84■■□□□ 1.41
PITRM1-204ENST00000424714 FANCD2Q9BXW9 1451 aa23.68■■□□□ 1.38
PITRM1-204ENST00000424714 KIF21AQ7Z4S6 1674 aa23.66■■□□□ 1.38
PITRM1-204ENST00000424714 CEP164Q9UPV0 1460 aa23.64■■□□□ 1.38
PITRM1-204ENST00000424714 PRDM2Q13029 1718 aa23.59■■□□□ 1.37
PITRM1-204ENST00000424714 CUX2O14529 1486 aa23.58■■□□□ 1.37
PITRM1-204ENST00000424714 MRC2Q9UBG0 1479 aa23.57■■□□□ 1.36
PITRM1-204ENST00000424714 THOC2Q8NI27 1593 aaKnown RBP23.57■■□□□ 1.36
PITRM1-204ENST00000424714 WDR62O43379 1518 aa23.47■■□□□ 1.35
PITRM1-204ENST00000424714 URB2Q14146 1524 aaKnown RBP23.4■■□□□ 1.34
PITRM1-204ENST00000424714 ABCC8Q09428 1581 aa23.35■■□□□ 1.33
PITRM1-204ENST00000424714 TOPBP1Q92547 1522 aa23.3■■□□□ 1.32
PITRM1-204ENST00000424714 DNMBPQ6XZF7 1577 aa23.29■■□□□ 1.32
PITRM1-204ENST00000424714 DNAJC5Q9H3Z4 198 aa23.19■■□□□ 1.3
PITRM1-204ENST00000424714 CUX1P39880 1505 aa23.17■■□□□ 1.3
PITRM1-204ENST00000424714 IFT140Q96RY7 1462 aa23.15■■□□□ 1.3
PITRM1-204ENST00000424714 WRNQ14191 1432 aaPredicted RBP eCLIP23.12■■□□□ 1.29
PITRM1-204ENST00000424714 POLA1P09884 1462 aaPredicted RBP23.11■■□□□ 1.29
PITRM1-204ENST00000424714 FGD5Q6ZNL6 1462 aa23.08■■□□□ 1.29
PITRM1-204ENST00000424714 SOGA1O94964 1423 aa23.05■■□□□ 1.28
PITRM1-204ENST00000424714 TOP2BQ02880 1626 aa23.01■■□□□ 1.27
PITRM1-204ENST00000424714 RAD54L2Q9Y4B4 1467 aa23■■□□□ 1.27
PITRM1-204ENST00000424714 TARBP1Q13395 1621 aaKnown RBP23■■□□□ 1.27
PITRM1-204ENST00000424714 SYNJ1O43426 1573 aa22.99■■□□□ 1.27
PITRM1-204ENST00000424714 BIVM-ERCC5R4GMW8 1640 aa22.99■■□□□ 1.27
PITRM1-204ENST00000424714 ZNF608Q9ULD9 1512 aaPredicted RBP22.98■■□□□ 1.27
PITRM1-204ENST00000424714 EIF4G3O43432 1585 aaKnown RBP22.89■■□□□ 1.26
PITRM1-204ENST00000424714 AQRO60306 1485 aaKnown RBP eCLIP22.89■■□□□ 1.251e-8■■■■■ 49.8
PITRM1-204ENST00000424714 WDR97A6NE52 1622 aa22.89■■□□□ 1.25
PITRM1-204ENST00000424714 TDRD9Q8NDG6 1382 aaKnown RBP22.89■■□□□ 1.25
PITRM1-204ENST00000424714 ABCA10Q8WWZ4 1543 aa22.87■■□□□ 1.25
PITRM1-204ENST00000424714 GAPVD1Q14C86 1478 aa22.78■■□□□ 1.24
PITRM1-204ENST00000424714 GRIN2BQ13224 1484 aa22.76■■□□□ 1.23
PITRM1-204ENST00000424714 ABCA5Q8WWZ7 1642 aa22.73■■□□□ 1.23
PITRM1-204ENST00000424714 TRIM41Q8WV44 630 aa22.71■■□□□ 1.23
PITRM1-204ENST00000424714 SNAPC4Q5SXM2 1469 aa22.7■■□□□ 1.22
PITRM1-204ENST00000424714 MAGI1Q96QZ7 1491 aaPredicted RBP22.69■■□□□ 1.22
PITRM1-204ENST00000424714 PBRM1Q86U86 1689 aa22.65■■□□□ 1.22
PITRM1-204ENST00000424714 OSCARQ8IYS5 282 aa22.65■■□□□ 1.22
PITRM1-204ENST00000424714 KIF27Q86VH2 1401 aa22.65■■□□□ 1.22
PITRM1-204ENST00000424714 FBLN2P98095 1184 aa22.63■■□□□ 1.21
PITRM1-204ENST00000424714 ERICH3Q5RHP9 1530 aa22.62■■□□□ 1.21
PITRM1-204ENST00000424714 CHMP7Q8WUX9 453 aaPredicted RBP22.61■■□□□ 1.21
PITRM1-204ENST00000424714 SYNJ2O15056 1496 aa22.6■■□□□ 1.21
PITRM1-204ENST00000424714 FHAD1B1AJZ9 1412 aa22.54■■□□□ 1.2
PITRM1-204ENST00000424714 CHD1O14646 1710 aa22.53■■□□□ 1.2
PITRM1-204ENST00000424714 ADAMTS12P58397 1594 aa22.52■■□□□ 1.2
PITRM1-204ENST00000424714 IGF1RP08069 1367 aa22.5■■□□□ 1.19
PITRM1-204ENST00000424714 CHIC1Q5VXU3 224 aa22.49■■□□□ 1.19
PITRM1-204ENST00000424714 GRIN2AQ12879 1464 aa22.46■■□□□ 1.19
PITRM1-204ENST00000424714 CUL7Q14999 1698 aa22.42■■□□□ 1.18
PITRM1-204ENST00000424714 RUSC2Q8N2Y8 1516 aa22.4■■□□□ 1.18
PITRM1-204ENST00000424714 CARMIL1Q5VZK9 1371 aa22.39■■□□□ 1.18
PITRM1-204ENST00000424714 NUP160Q12769 1436 aa22.35■■□□□ 1.17
PITRM1-204ENST00000424714 CLASP1Q7Z460 1538 aa22.34■■□□□ 1.17
PITRM1-204ENST00000424714 EEA1Q15075 1411 aa22.33■■□□□ 1.17
PITRM1-204ENST00000424714 CEP170Q5SW79 1584 aa22.3■■□□□ 1.16
PITRM1-204ENST00000424714 RIMBP3CA6NJZ7 1639 aa22.3■■□□□ 1.16
PITRM1-204ENST00000424714 RIMBP3BA6NNM3 1639 aa22.3■■□□□ 1.16
PITRM1-204ENST00000424714 RIMBP3Q9UFD9 1639 aa22.3■■□□□ 1.16
PITRM1-204ENST00000424714 RAPGEF2Q9Y4G8 1499 aa22.28■■□□□ 1.16
PITRM1-204ENST00000424714 CSRNP3Q8WYN3 585 aa22.27■■□□□ 1.16
PITRM1-204ENST00000424714 ARHGEF11O15085 1522 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 191.3 ms