RNA–Protein interactions for RNA: ENST00000424484.5

C1orf228-205, Transcript of Uncharacterized protein C1orf228, humanhuman

TSL 5

Gene C1orf228, Length 837 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf228-205ENST00000424484 NISCHQ9Y2I1 1504 aa45.13■■■■■ 4.82
C1orf228-205ENST00000424484 CCDC180Q9P1Z9 1646 aa39.9■■■■□ 3.98
C1orf228-205ENST00000424484 ABCC9O60706 1549 aa38.5■■■■□ 3.75
C1orf228-205ENST00000424484 ZCCHC6Q5VYS8 1495 aaKnown RBP37.74■■■■□ 3.63
C1orf228-205ENST00000424484 DCAF1Q9Y4B6 1507 aa37.4■■■■□ 3.58
C1orf228-205ENST00000424484 NACADO15069 1562 aa37.38■■■■□ 3.57
C1orf228-205ENST00000424484 MYO15BQ96JP2 1530 aa37.36■■■■□ 3.57
C1orf228-205ENST00000424484 DCAF8L2P0C7V8 631 aa37.35■■■■□ 3.57
C1orf228-205ENST00000424484 RB1CC1Q8TDY2 1594 aa37.28■■■■□ 3.56
C1orf228-205ENST00000424484 SCRIBQ14160 1630 aa36.44■■■■□ 3.42
C1orf228-205ENST00000424484 UNC13AQ9UPW8 1703 aa36.41■■■■□ 3.42
C1orf228-205ENST00000424484 BICRAQ9NZM4 1560 aa36.15■■■■□ 3.38
C1orf228-205ENST00000424484 PABPN1Q86U42 306 aaKnown RBP eCLIP36.03■■■■□ 3.36
C1orf228-205ENST00000424484 SHROOM4Q9ULL8 1493 aa35.92■■■■□ 3.34
C1orf228-205ENST00000424484 EIF4G1Q04637 1599 aaKnown RBP35.15■■■■□ 3.22
C1orf228-205ENST00000424484 CECR2Q9BXF3 1484 aa35.09■■■■□ 3.21
C1orf228-205ENST00000424484 BAZ1AQ9NRL2 1556 aaPredicted RBP34.94■■■■□ 3.18
C1orf228-205ENST00000424484 SMARCA4P51532 1647 aa34.91■■■■□ 3.18
C1orf228-205ENST00000424484 CC2D2AQ9P2K1 1620 aa34.86■■■■□ 3.17
C1orf228-205ENST00000424484 DNAJC5BQ9UF47 199 aa34.82■■■■□ 3.16
C1orf228-205ENST00000424484 MROH2BQ7Z745 1585 aa34.79■■■■□ 3.16
C1orf228-205ENST00000424484 ATAD2BQ9ULI0 1458 aa34.58■■■■□ 3.13
C1orf228-205ENST00000424484 RSF1Q96T23 1441 aaPredicted RBP34.58■■■■□ 3.13
C1orf228-205ENST00000424484 SMARCA2P51531 1590 aa34.57■■■■□ 3.13
C1orf228-205ENST00000424484 PEG3Q9GZU2 1588 aa34.57■■■■□ 3.13
C1orf228-205ENST00000424484 NCAPD3P42695 1498 aa34.48■■■■□ 3.11
C1orf228-205ENST00000424484 WIZO95785 1651 aa34.41■■■■□ 3.1
C1orf228-205ENST00000424484 HMGXB3Q12766 1538 aa34.39■■■■□ 3.1
C1orf228-205ENST00000424484 BAZ1BQ9UIG0 1483 aaKnown RBP34.33■■■■□ 3.09
C1orf228-205ENST00000424484 TOP2AP11388 1531 aaKnown RBP34.13■■■■□ 3.05
C1orf228-205ENST00000424484 SUPT5HO00267 1087 aaKnown RBP34.02■■■■□ 3.04
C1orf228-205ENST00000424484 CCDC88BA6NC98 1476 aa33.69■■■□□ 2.98
C1orf228-205ENST00000424484 CADPSQ9ULU8 1353 aa33.49■■■□□ 2.95
C1orf228-205ENST00000424484 LAMC3Q9Y6N6 1575 aa33.48■■■□□ 2.95
C1orf228-205ENST00000424484 NESP48681 1621 aa33.48■■■□□ 2.95
C1orf228-205ENST00000424484 CFTRP13569 1480 aa33.43■■■□□ 2.94
C1orf228-205ENST00000424484 PDS5BQ9NTI5 1447 aa33.23■■■□□ 2.91
C1orf228-205ENST00000424484 PRDM2Q13029 1718 aa33.19■■■□□ 2.9
C1orf228-205ENST00000424484 ERCC6Q03468 1493 aa33.15■■■□□ 2.9
C1orf228-205ENST00000424484 FANCD2Q9BXW9 1451 aa33.12■■■□□ 2.89
C1orf228-205ENST00000424484 KIF21AQ7Z4S6 1674 aa33.09■■■□□ 2.89
C1orf228-205ENST00000424484 CEP164Q9UPV0 1460 aa33.04■■■□□ 2.88
C1orf228-205ENST00000424484 THOC2Q8NI27 1593 aaKnown RBP32.9■■■□□ 2.86
C1orf228-205ENST00000424484 MRC2Q9UBG0 1479 aa32.89■■■□□ 2.86
C1orf228-205ENST00000424484 WDR62O43379 1518 aa32.77■■■□□ 2.84
C1orf228-205ENST00000424484 URB2Q14146 1524 aaKnown RBP32.77■■■□□ 2.84
C1orf228-205ENST00000424484 DNMBPQ6XZF7 1577 aa32.67■■■□□ 2.82
C1orf228-205ENST00000424484 TOPBP1Q92547 1522 aa32.66■■■□□ 2.82
C1orf228-205ENST00000424484 ABCC8Q09428 1581 aa32.66■■■□□ 2.82
C1orf228-205ENST00000424484 CUX2O14529 1486 aa32.63■■■□□ 2.81
C1orf228-205ENST00000424484 CUX1P39880 1505 aa32.61■■■□□ 2.81
C1orf228-205ENST00000424484 WRNQ14191 1432 aaPredicted RBP eCLIP32.59■■■□□ 2.81
C1orf228-205ENST00000424484 SYNJ1O43426 1573 aa32.49■■■□□ 2.79
C1orf228-205ENST00000424484 TOP2BQ02880 1626 aa32.47■■■□□ 2.79
C1orf228-205ENST00000424484 BIVM-ERCC5R4GMW8 1640 aa32.46■■■□□ 2.79
C1orf228-205ENST00000424484 POLA1P09884 1462 aaPredicted RBP32.42■■■□□ 2.78
C1orf228-205ENST00000424484 FGD5Q6ZNL6 1462 aa32.41■■■□□ 2.78
C1orf228-205ENST00000424484 IFT140Q96RY7 1462 aa32.32■■■□□ 2.76
C1orf228-205ENST00000424484 TARBP1Q13395 1621 aaKnown RBP32.26■■■□□ 2.75
C1orf228-205ENST00000424484 SOGA1O94964 1423 aa32.26■■■□□ 2.75
C1orf228-205ENST00000424484 RAD54L2Q9Y4B4 1467 aa32.25■■■□□ 2.75
C1orf228-205ENST00000424484 WDR97A6NE52 1622 aa32.14■■■□□ 2.74
C1orf228-205ENST00000424484 ABCA10Q8WWZ4 1543 aa32.13■■■□□ 2.73
C1orf228-205ENST00000424484 ZNF608Q9ULD9 1512 aaPredicted RBP32.12■■■□□ 2.73
C1orf228-205ENST00000424484 TRIM41Q8WV44 630 aa32.11■■■□□ 2.73
C1orf228-205ENST00000424484 CHIC1Q5VXU3 224 aa32.09■■■□□ 2.73
C1orf228-205ENST00000424484 EIF4G3O43432 1585 aaKnown RBP32.04■■■□□ 2.72
C1orf228-205ENST00000424484 TDRD9Q8NDG6 1382 aaKnown RBP32.01■■■□□ 2.71
C1orf228-205ENST00000424484 AQRO60306 1485 aaKnown RBP eCLIP31.98■■■□□ 2.71
C1orf228-205ENST00000424484 ABCA5Q8WWZ7 1642 aa31.97■■■□□ 2.71
C1orf228-205ENST00000424484 GAPVD1Q14C86 1478 aa31.91■■■□□ 2.7
C1orf228-205ENST00000424484 KIF27Q86VH2 1401 aa31.85■■■□□ 2.69
C1orf228-205ENST00000424484 GRIN2BQ13224 1484 aa31.84■■■□□ 2.69
C1orf228-205ENST00000424484 PBRM1Q86U86 1689 aa31.81■■■□□ 2.68
C1orf228-205ENST00000424484 ERICH3Q5RHP9 1530 aa31.75■■■□□ 2.67
C1orf228-205ENST00000424484 SNAPC4Q5SXM2 1469 aa31.74■■■□□ 2.67
C1orf228-205ENST00000424484 MAGI1Q96QZ7 1491 aaPredicted RBP31.72■■■□□ 2.67
C1orf228-205ENST00000424484 RUSC2Q8N2Y8 1516 aa31.71■■■□□ 2.67
C1orf228-205ENST00000424484 IGF1RP08069 1367 aa31.66■■■□□ 2.66
C1orf228-205ENST00000424484 ADAMTS12P58397 1594 aa31.64■■■□□ 2.65
C1orf228-205ENST00000424484 EEA1Q15075 1411 aa31.61■■■□□ 2.65
C1orf228-205ENST00000424484 SYNJ2O15056 1496 aa31.59■■■□□ 2.65
C1orf228-205ENST00000424484 FHAD1B1AJZ9 1412 aa31.58■■■□□ 2.65
C1orf228-205ENST00000424484 CUL7Q14999 1698 aa31.57■■■□□ 2.64
C1orf228-205ENST00000424484 CHD1O14646 1710 aa31.49■■■□□ 2.63
C1orf228-205ENST00000424484 CARMIL1Q5VZK9 1371 aa31.46■■■□□ 2.63
C1orf228-205ENST00000424484 CHMP7Q8WUX9 453 aaPredicted RBP31.46■■■□□ 2.63
C1orf228-205ENST00000424484 GRIN2AQ12879 1464 aa31.45■■■□□ 2.62
C1orf228-205ENST00000424484 FBLN2P98095 1184 aa31.44■■■□□ 2.62
C1orf228-205ENST00000424484 CSRNP3Q8WYN3 585 aa31.43■■■□□ 2.62
C1orf228-205ENST00000424484 FAM9AQ8IZU1 332 aaPredicted RBP31.42■■■□□ 2.62
C1orf228-205ENST00000424484 PRXQ9BXM0 1461 aa31.4■■■□□ 2.62
C1orf228-205ENST00000424484 RAPGEF2Q9Y4G8 1499 aa31.36■■■□□ 2.61
C1orf228-205ENST00000424484 OSCARQ8IYS5 282 aa31.3■■■□□ 2.6
C1orf228-205ENST00000424484 NUP160Q12769 1436 aa31.3■■■□□ 2.6
C1orf228-205ENST00000424484 CEP170Q5SW79 1584 aa31.27■■■□□ 2.6
C1orf228-205ENST00000424484 KIF21BO75037 1637 aa31.26■■■□□ 2.59
C1orf228-205ENST00000424484 CLASP1Q7Z460 1538 aa31.21■■■□□ 2.59
C1orf228-205ENST00000424484 GOLGA3Q08378 1498 aa31.11■■■□□ 2.57
C1orf228-205ENST00000424484 KIAA0586Q9BVV6 1533 aa31.11■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms