RNA–Protein interactions for RNA: ENST00000423515.2

AL390838.1-201, humanhuman

TSL 1 (best) BASIC

Gene AL390838.1, Length 2,007 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL390838.1-201ENST00000423515 NISCHQ9Y2I1 1504 aa26.97■■□□□ 1.91
AL390838.1-201ENST00000423515 CCDC180Q9P1Z9 1646 aa23.28■■□□□ 1.32
AL390838.1-201ENST00000423515 ZCCHC6Q5VYS8 1495 aaKnown RBP22.69■■□□□ 1.22
AL390838.1-201ENST00000423515 DCAF8L2P0C7V8 631 aa22.4■■□□□ 1.18
AL390838.1-201ENST00000423515 SHROOM4Q9ULL8 1493 aa22.34■■□□□ 1.17
AL390838.1-201ENST00000423515 DCAF1Q9Y4B6 1507 aa22.25■■□□□ 1.15
AL390838.1-201ENST00000423515 ABCC9O60706 1549 aa21.89■■□□□ 1.09
AL390838.1-201ENST00000423515 MYO15BQ96JP2 1530 aa21.87■■□□□ 1.09
AL390838.1-201ENST00000423515 SUPT5HO00267 1087 aaKnown RBP21.7■■□□□ 1.06
AL390838.1-201ENST00000423515 NACADO15069 1562 aa21.68■■□□□ 1.06
AL390838.1-201ENST00000423515 SCRIBQ14160 1630 aa21.54■■□□□ 1.04
AL390838.1-201ENST00000423515 RB1CC1Q8TDY2 1594 aa21.43■■□□□ 1.02
AL390838.1-201ENST00000423515 RSF1Q96T23 1441 aaPredicted RBP21.07■□□□□ 0.96
AL390838.1-201ENST00000423515 CECR2Q9BXF3 1484 aa20.95■□□□□ 0.94
AL390838.1-201ENST00000423515 UNC13AQ9UPW8 1703 aa20.94■□□□□ 0.94
AL390838.1-201ENST00000423515 CHIC1Q5VXU3 224 aa20.87■□□□□ 0.93
AL390838.1-201ENST00000423515 MROH2BQ7Z745 1585 aa20.85■□□□□ 0.93
AL390838.1-201ENST00000423515 BAZ1AQ9NRL2 1556 aaPredicted RBP20.8■□□□□ 0.92
AL390838.1-201ENST00000423515 PABPN1Q86U42 306 aaKnown RBP eCLIP20.78■□□□□ 0.92
AL390838.1-201ENST00000423515 BICRAQ9NZM4 1560 aa20.74■□□□□ 0.91
AL390838.1-201ENST00000423515 WIZO95785 1651 aa20.69■□□□□ 0.9
AL390838.1-201ENST00000423515 SMARCA4P51532 1647 aa20.64■□□□□ 0.89
AL390838.1-201ENST00000423515 TOP2AP11388 1531 aaKnown RBP20.47■□□□□ 0.87
AL390838.1-201ENST00000423515 TRIM41Q8WV44 630 aa20.37■□□□□ 0.85
AL390838.1-201ENST00000423515 PEG3Q9GZU2 1588 aa20.35■□□□□ 0.85
AL390838.1-201ENST00000423515 CCDC88BA6NC98 1476 aa20.32■□□□□ 0.84
AL390838.1-201ENST00000423515 SMARCA2P51531 1590 aa20.28■□□□□ 0.84
AL390838.1-201ENST00000423515 ATAD2BQ9ULI0 1458 aa20.27■□□□□ 0.84
AL390838.1-201ENST00000423515 BAZ1BQ9UIG0 1483 aaKnown RBP20.19■□□□□ 0.82
AL390838.1-201ENST00000423515 EIF4G1Q04637 1599 aaKnown RBP20.17■□□□□ 0.82
AL390838.1-201ENST00000423515 LOC105371045A0A1W2PR82 267 aa20.14■□□□□ 0.81
AL390838.1-201ENST00000423515 NCAPD3P42695 1498 aa20.04■□□□□ 0.8
AL390838.1-201ENST00000423515 FAM9AQ8IZU1 332 aaPredicted RBP20.03■□□□□ 0.8
AL390838.1-201ENST00000423515 HMGXB3Q12766 1538 aa19.98■□□□□ 0.79
AL390838.1-201ENST00000423515 ABCC8Q09428 1581 aa19.98■□□□□ 0.79
AL390838.1-201ENST00000423515 WRNQ14191 1432 aaPredicted RBP eCLIP19.84■□□□□ 0.77
AL390838.1-201ENST00000423515 EHMT2Q96KQ7 1210 aa19.77■□□□□ 0.76
AL390838.1-201ENST00000423515 CC2D2AQ9P2K1 1620 aa19.76■□□□□ 0.75
AL390838.1-201ENST00000423515 SOGA1O94964 1423 aa19.71■□□□□ 0.75
AL390838.1-201ENST00000423515 EEA1Q15075 1411 aa19.71■□□□□ 0.75
AL390838.1-201ENST00000423515 CFTRP13569 1480 aa19.68■□□□□ 0.74
AL390838.1-201ENST00000423515 SYNJ1O43426 1573 aa19.68■□□□□ 0.74
AL390838.1-201ENST00000423515 CSRNP3Q8WYN3 585 aa19.65■□□□□ 0.74
AL390838.1-201ENST00000423515 RUSC2Q8N2Y8 1516 aa19.59■□□□□ 0.73
AL390838.1-201ENST00000423515 CADPSQ9ULU8 1353 aa19.59■□□□□ 0.73
AL390838.1-201ENST00000423515 TOP2BQ02880 1626 aa19.58■□□□□ 0.72
AL390838.1-201ENST00000423515 PCGF6Q9BYE7 350 aa19.57■□□□□ 0.72
AL390838.1-201ENST00000423515 BIVM-ERCC5R4GMW8 1640 aa19.52■□□□□ 0.72
AL390838.1-201ENST00000423515 PRDM2Q13029 1718 aa19.49■□□□□ 0.71
AL390838.1-201ENST00000423515 UBTFP17480 764 aaKnown RBP19.48■□□□□ 0.71
AL390838.1-201ENST00000423515 CUX1P39880 1505 aa19.47■□□□□ 0.71
AL390838.1-201ENST00000423515 TNIKQ9UKE5 1360 aa19.47■□□□□ 0.71
AL390838.1-201ENST00000423515 TRIM26Q12899 539 aaPredicted RBP19.47■□□□□ 0.71
AL390838.1-201ENST00000423515 GOLGA3Q08378 1498 aa19.45■□□□□ 0.7
AL390838.1-201ENST00000423515 CEP164Q9UPV0 1460 aa19.42■□□□□ 0.7
AL390838.1-201ENST00000423515 CEP162Q5TB80 1403 aa19.39■□□□□ 0.69
AL390838.1-201ENST00000423515 KIF21BO75037 1637 aa19.38■□□□□ 0.69
AL390838.1-201ENST00000423515 FANCD2Q9BXW9 1451 aa19.35■□□□□ 0.69
AL390838.1-201ENST00000423515 KIF27Q86VH2 1401 aa19.33■□□□□ 0.68
AL390838.1-201ENST00000423515 NESP48681 1621 aa19.29■□□□□ 0.68
AL390838.1-201ENST00000423515 LAMC3Q9Y6N6 1575 aa19.28■□□□□ 0.68
AL390838.1-201ENST00000423515 RAPGEF2Q9Y4G8 1499 aa19.27■□□□□ 0.68
AL390838.1-201ENST00000423515 DNAJC5BQ9UF47 199 aa19.25■□□□□ 0.67
AL390838.1-201ENST00000423515 FGD5Q6ZNL6 1462 aa19.23■□□□□ 0.67
AL390838.1-201ENST00000423515 PRXQ9BXM0 1461 aa19.23■□□□□ 0.67
AL390838.1-201ENST00000423515 HRCP23327 699 aa19.2■□□□□ 0.66
AL390838.1-201ENST00000423515 ERICH3Q5RHP9 1530 aa19.2■□□□□ 0.66
AL390838.1-201ENST00000423515 PPARGC1BQ86YN6 1023 aaKnown RBP19.2■□□□□ 0.66
AL390838.1-201ENST00000423515 CUX2O14529 1486 aa19.2■□□□□ 0.66
AL390838.1-201ENST00000423515 PDS5BQ9NTI5 1447 aa19.19■□□□□ 0.66
AL390838.1-201ENST00000423515 DNMBPQ6XZF7 1577 aa19.19■□□□□ 0.66
AL390838.1-201ENST00000423515 CLIP1P30622 1438 aa19.18■□□□□ 0.66
AL390838.1-201ENST00000423515 TOPBP1Q92547 1522 aa19.16■□□□□ 0.66
AL390838.1-201ENST00000423515 IGF1RP08069 1367 aa19.13■□□□□ 0.65
AL390838.1-201ENST00000423515 RANGAP1P46060 587 aaPredicted RBP19.1■□□□□ 0.65
AL390838.1-201ENST00000423515 POLA1P09884 1462 aaPredicted RBP19.09■□□□□ 0.65
AL390838.1-201ENST00000423515 RAD54L2Q9Y4B4 1467 aa19.07■□□□□ 0.64
AL390838.1-201ENST00000423515 URB2Q14146 1524 aaKnown RBP19.06■□□□□ 0.64
AL390838.1-201ENST00000423515 CARMIL1Q5VZK9 1371 aa19.06■□□□□ 0.64
AL390838.1-201ENST00000423515 ABCA10Q8WWZ4 1543 aa19.06■□□□□ 0.64
AL390838.1-201ENST00000423515 VPS8Q8N3P4 1428 aa19.03■□□□□ 0.64
AL390838.1-201ENST00000423515 APLP2Q06481 763 aa19■□□□□ 0.63
AL390838.1-201ENST00000423515 TTBK1Q5TCY1 1321 aaPredicted RBP18.99■□□□□ 0.63
AL390838.1-201ENST00000423515 KIF21AQ7Z4S6 1674 aa18.99■□□□□ 0.63
AL390838.1-201ENST00000423515 ARAP1Q96P48 1450 aa18.89■□□□□ 0.61
AL390838.1-201ENST00000423515 TDRD9Q8NDG6 1382 aaKnown RBP18.89■□□□□ 0.61
AL390838.1-201ENST00000423515 MRC2Q9UBG0 1479 aa18.88■□□□□ 0.61
AL390838.1-201ENST00000423515 WDR97A6NE52 1622 aa18.88■□□□□ 0.61
AL390838.1-201ENST00000423515 CUL7Q14999 1698 aa18.86■□□□□ 0.61
AL390838.1-201ENST00000423515 GAPVD1Q14C86 1478 aa18.86■□□□□ 0.61
AL390838.1-201ENST00000423515 ZEB1P37275 1124 aaPredicted RBP18.86■□□□□ 0.61
AL390838.1-201ENST00000423515 ARHGAP35Q9NRY4 1499 aa18.85■□□□□ 0.61
AL390838.1-201ENST00000423515 ABCA5Q8WWZ7 1642 aa18.82■□□□□ 0.6
AL390838.1-201ENST00000423515 TARBP1Q13395 1621 aaKnown RBP18.8■□□□□ 0.6
AL390838.1-201ENST00000423515 ERCC6Q03468 1493 aa18.76■□□□□ 0.59
AL390838.1-201ENST00000423515 WDR62O43379 1518 aa18.74■□□□□ 0.59
AL390838.1-201ENST00000423515 IFT140Q96RY7 1462 aa18.71■□□□□ 0.59
AL390838.1-201ENST00000423515 AQRO60306 1485 aaKnown RBP eCLIP18.7■□□□□ 0.58
AL390838.1-201ENST00000423515 KANK4Q5T7N3 995 aaPredicted RBP18.69■□□□□ 0.58
AL390838.1-201ENST00000423515 P3H3Q8IVL6 736 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms