RNA–Protein interactions for RNA: ENST00000423136.1

GAPDHP55-201, Transcript of glyceraldehyde 3 phosphate dehydrogenase pseudogene 55, humanhuman

BASIC

Gene GAPDHP55, Length 803 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP55-201ENST00000423136 NISCHQ9Y2I1 1504 aa18.46■□□□□ 0.55
GAPDHP55-201ENST00000423136 CHIC1Q5VXU3 224 aa17.23■□□□□ 0.35
GAPDHP55-201ENST00000423136 ABCC9O60706 1549 aa16.6■□□□□ 0.25
GAPDHP55-201ENST00000423136 CCDC180Q9P1Z9 1646 aa16.46■□□□□ 0.23
GAPDHP55-201ENST00000423136 AEBP2Q6ZN18 517 aaPredicted RBP16.23■□□□□ 0.19
GAPDHP55-201ENST00000423136 DCAF8L2P0C7V8 631 aa15.83■□□□□ 0.12
GAPDHP55-201ENST00000423136 RB1CC1Q8TDY2 1594 aa15.71■□□□□ 0.11
GAPDHP55-201ENST00000423136 NACADO15069 1562 aa15.58■□□□□ 0.09
GAPDHP55-201ENST00000423136 PABPN1Q86U42 306 aaKnown RBP eCLIP15.53■□□□□ 0.08
GAPDHP55-201ENST00000423136 DNAJC5BQ9UF47 199 aa15.5■□□□□ 0.07
GAPDHP55-201ENST00000423136 UNC13AQ9UPW8 1703 aa15.32■□□□□ 0.04
GAPDHP55-201ENST00000423136 MYO15BQ96JP2 1530 aa15.3■□□□□ 0.04
GAPDHP55-201ENST00000423136 ZCCHC6Q5VYS8 1495 aaKnown RBP15.29■□□□□ 0.04
GAPDHP55-201ENST00000423136 PHF23Q9BUL5 403 aaPredicted RBP15.28■□□□□ 0.04
GAPDHP55-201ENST00000423136 BICRAQ9NZM4 1560 aa15.23■□□□□ 0.03
GAPDHP55-201ENST00000423136 SCRIBQ14160 1630 aa15.16■□□□□ 0.02
GAPDHP55-201ENST00000423136 DCAF1Q9Y4B6 1507 aa15.16■□□□□ 0.02
GAPDHP55-201ENST00000423136 SLC24A1O60721 1099 aa15.1■□□□□ 0.01
GAPDHP55-201ENST00000423136 EHMT2Q96KQ7 1210 aa14.96□□□□□ -0.01
GAPDHP55-201ENST00000423136 SHROOM4Q9ULL8 1493 aa14.95□□□□□ -0.02
GAPDHP55-201ENST00000423136 CC2D2AQ9P2K1 1620 aa14.92□□□□□ -0.02
GAPDHP55-201ENST00000423136 CECR2Q9BXF3 1484 aa14.9□□□□□ -0.02
GAPDHP55-201ENST00000423136 EIF4G1Q04637 1599 aaKnown RBP14.88□□□□□ -0.03
GAPDHP55-201ENST00000423136 PLPPR3Q6T4P5 718 aa14.61□□□□□ -0.07
GAPDHP55-201ENST00000423136 ATAD2BQ9ULI0 1458 aa14.4□□□□□ -0.1
GAPDHP55-201ENST00000423136 NCAPD3P42695 1498 aa14.39□□□□□ -0.11
GAPDHP55-201ENST00000423136 SMARCA4P51532 1647 aa14.38□□□□□ -0.11
GAPDHP55-201ENST00000423136 SMARCA2P51531 1590 aa14.34□□□□□ -0.11
GAPDHP55-201ENST00000423136 ERCC6Q03468 1493 aa14.34□□□□□ -0.11
GAPDHP55-201ENST00000423136 BAZ1AQ9NRL2 1556 aaPredicted RBP14.32□□□□□ -0.12
GAPDHP55-201ENST00000423136 BAZ1BQ9UIG0 1483 aaKnown RBP14.31□□□□□ -0.12
GAPDHP55-201ENST00000423136 HMGXB3Q12766 1538 aa14.28□□□□□ -0.12
GAPDHP55-201ENST00000423136 KCNA4P22459 653 aa14.26□□□□□ -0.13
GAPDHP55-201ENST00000423136 NESP48681 1621 aa14.26□□□□□ -0.13
GAPDHP55-201ENST00000423136 MROH2BQ7Z745 1585 aa14.26□□□□□ -0.13
GAPDHP55-201ENST00000423136 CSRNP3Q8WYN3 585 aa14.23□□□□□ -0.13
GAPDHP55-201ENST00000423136 PEG3Q9GZU2 1588 aa14.17□□□□□ -0.14
GAPDHP55-201ENST00000423136 DNAJC5Q9H3Z4 198 aa14.16□□□□□ -0.14
GAPDHP55-201ENST00000423136 CUX2O14529 1486 aa14.16□□□□□ -0.14
GAPDHP55-201ENST00000423136 AMER1Q5JTC6 1135 aaPredicted RBP14.1□□□□□ -0.15
GAPDHP55-201ENST00000423136 WIZO95785 1651 aa14.1□□□□□ -0.15
GAPDHP55-201ENST00000423136 LAMC3Q9Y6N6 1575 aa14.06□□□□□ -0.16
GAPDHP55-201ENST00000423136 RTN4Q9NQC3 1192 aaKnown RBP14.06□□□□□ -0.16
GAPDHP55-201ENST00000423136 PDS5BQ9NTI5 1447 aa14.04□□□□□ -0.16
GAPDHP55-201ENST00000423136 KIF21AQ7Z4S6 1674 aa14.01□□□□□ -0.17
GAPDHP55-201ENST00000423136 CADPSQ9ULU8 1353 aa14.01□□□□□ -0.17
GAPDHP55-201ENST00000423136 THOC2Q8NI27 1593 aaKnown RBP14□□□□□ -0.17
GAPDHP55-201ENST00000423136 RSF1Q96T23 1441 aaPredicted RBP13.98□□□□□ -0.17
GAPDHP55-201ENST00000423136 MRC2Q9UBG0 1479 aa13.91□□□□□ -0.18
GAPDHP55-201ENST00000423136 TOP2AP11388 1531 aaKnown RBP13.89□□□□□ -0.19
GAPDHP55-201ENST00000423136 FANCD2Q9BXW9 1451 aa13.87□□□□□ -0.19
GAPDHP55-201ENST00000423136 CEP164Q9UPV0 1460 aa13.87□□□□□ -0.19
GAPDHP55-201ENST00000423136 SLC4A1APQ9BWU0 796 aaKnown RBP13.84□□□□□ -0.19
GAPDHP55-201ENST00000423136 CFTRP13569 1480 aa13.83□□□□□ -0.2
GAPDHP55-201ENST00000423136 WDR62O43379 1518 aa13.82□□□□□ -0.2
GAPDHP55-201ENST00000423136 CCDC88BA6NC98 1476 aa13.78□□□□□ -0.2
GAPDHP55-201ENST00000423136 URB2Q14146 1524 aaKnown RBP13.74□□□□□ -0.21
GAPDHP55-201ENST00000423136 TRIM41Q8WV44 630 aa13.73□□□□□ -0.21
GAPDHP55-201ENST00000423136 PRDM2Q13029 1718 aa13.64□□□□□ -0.23
GAPDHP55-201ENST00000423136 OSCARQ8IYS5 282 aa13.63□□□□□ -0.23
GAPDHP55-201ENST00000423136 NCBP3Q53F19 620 aaKnown RBP13.62□□□□□ -0.23
GAPDHP55-201ENST00000423136 SUPT5HO00267 1087 aaKnown RBP13.61□□□□□ -0.23
GAPDHP55-201ENST00000423136 TOPBP1Q92547 1522 aa13.59□□□□□ -0.23
GAPDHP55-201ENST00000423136 ZNF608Q9ULD9 1512 aaPredicted RBP13.59□□□□□ -0.23
GAPDHP55-201ENST00000423136 SENP3Q9H4L4 574 aaPredicted RBP13.59□□□□□ -0.23
GAPDHP55-201ENST00000423136 IFT140Q96RY7 1462 aa13.57□□□□□ -0.24
GAPDHP55-201ENST00000423136 ADRA2BP18089 450 aa13.55□□□□□ -0.24
GAPDHP55-201ENST00000423136 DNMBPQ6XZF7 1577 aa13.54□□□□□ -0.24
GAPDHP55-201ENST00000423136 FBLN2P98095 1184 aa13.53□□□□□ -0.24
GAPDHP55-201ENST00000423136 ABCC8Q09428 1581 aa13.53□□□□□ -0.24
GAPDHP55-201ENST00000423136 AQRO60306 1485 aaKnown RBP eCLIP13.51□□□□□ -0.25
GAPDHP55-201ENST00000423136 EIF4G3O43432 1585 aaKnown RBP13.48□□□□□ -0.25
GAPDHP55-201ENST00000423136 RAD54L2Q9Y4B4 1467 aa13.48□□□□□ -0.25
GAPDHP55-201ENST00000423136 POLA1P09884 1462 aaPredicted RBP13.47□□□□□ -0.25
GAPDHP55-201ENST00000423136 TDRD9Q8NDG6 1382 aaKnown RBP13.45□□□□□ -0.26
GAPDHP55-201ENST00000423136 SOGA1O94964 1423 aa13.45□□□□□ -0.26
GAPDHP55-201ENST00000423136 TARBP1Q13395 1621 aaKnown RBP13.43□□□□□ -0.26
GAPDHP55-201ENST00000423136 FGD5Q6ZNL6 1462 aa13.42□□□□□ -0.26
GAPDHP55-201ENST00000423136 CUX1P39880 1505 aa13.39□□□□□ -0.27
GAPDHP55-201ENST00000423136 RIMBP3CA6NJZ7 1639 aa13.39□□□□□ -0.27
GAPDHP55-201ENST00000423136 RIMBP3BA6NNM3 1639 aa13.39□□□□□ -0.27
GAPDHP55-201ENST00000423136 RIMBP3Q9UFD9 1639 aa13.39□□□□□ -0.27
GAPDHP55-201ENST00000423136 CHD1O14646 1710 aa13.37□□□□□ -0.27
GAPDHP55-201ENST00000423136 CYB5RLQ6IPT4 315 aa13.37□□□□□ -0.27
GAPDHP55-201ENST00000423136 ARHGEF11O15085 1522 aa13.36□□□□□ -0.27
GAPDHP55-201ENST00000423136 CHMP7Q8WUX9 453 aaPredicted RBP13.36□□□□□ -0.27
GAPDHP55-201ENST00000423136 SNAPC4Q5SXM2 1469 aa13.34□□□□□ -0.27
GAPDHP55-201ENST00000423136 GRIN2BQ13224 1484 aa13.29□□□□□ -0.28
GAPDHP55-201ENST00000423136 GAPVD1Q14C86 1478 aa13.27□□□□□ -0.29
GAPDHP55-201ENST00000423136 TRHP20396 242 aaPredicted RBP13.26□□□□□ -0.29
GAPDHP55-201ENST00000423136 MAGI1Q96QZ7 1491 aaPredicted RBP13.25□□□□□ -0.29
GAPDHP55-201ENST00000423136 DAXXQ9UER7 740 aaPredicted RBP13.24□□□□□ -0.29
GAPDHP55-201ENST00000423136 ARAP1Q96P48 1450 aa13.23□□□□□ -0.29
GAPDHP55-201ENST00000423136 WRNQ14191 1432 aaPredicted RBP eCLIP13.23□□□□□ -0.29
GAPDHP55-201ENST00000423136 WDR97A6NE52 1622 aa13.23□□□□□ -0.29
GAPDHP55-201ENST00000423136 SYNJ2O15056 1496 aa13.23□□□□□ -0.29
GAPDHP55-201ENST00000423136 SYNJ1O43426 1573 aa13.21□□□□□ -0.29
GAPDHP55-201ENST00000423136 ABCA10Q8WWZ4 1543 aa13.21□□□□□ -0.29
GAPDHP55-201ENST00000423136 PBRM1Q86U86 1689 aa13.21□□□□□ -0.3
GAPDHP55-201ENST00000423136 CLASP1Q7Z460 1538 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms