RNA–Protein interactions for RNA: ENST00000422998.1

DENND1B-205, Transcript of DENN domain containing 1B, humanhuman

TSL 3

Gene DENND1B, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND1B-205ENST00000422998 NISCHQ9Y2I1 1504 aa43.33■■■■■ 4.53
DENND1B-205ENST00000422998 CCDC180Q9P1Z9 1646 aa38.43■■■■□ 3.74
DENND1B-205ENST00000422998 ABCC9O60706 1549 aa37.03■■■■□ 3.52
DENND1B-205ENST00000422998 ZCCHC6Q5VYS8 1495 aaKnown RBP36.18■■■■□ 3.38
DENND1B-205ENST00000422998 MYO15BQ96JP2 1530 aa36.11■■■■□ 3.37
DENND1B-205ENST00000422998 NACADO15069 1562 aa36.06■■■■□ 3.36
DENND1B-205ENST00000422998 DCAF1Q9Y4B6 1507 aa36.03■■■■□ 3.36
DENND1B-205ENST00000422998 RB1CC1Q8TDY2 1594 aa35.93■■■■□ 3.34
DENND1B-205ENST00000422998 DCAF8L2P0C7V8 631 aa35.72■■■■□ 3.31
DENND1B-205ENST00000422998 UNC13AQ9UPW8 1703 aa35.06■■■■□ 3.2
DENND1B-205ENST00000422998 SCRIBQ14160 1630 aa34.85■■■■□ 3.17
DENND1B-205ENST00000422998 BICRAQ9NZM4 1560 aa34.84■■■■□ 3.17
DENND1B-205ENST00000422998 SHROOM4Q9ULL8 1493 aa34.71■■■■□ 3.15
DENND1B-205ENST00000422998 PABPN1Q86U42 306 aaKnown RBP eCLIP34.61■■■■□ 3.13
DENND1B-205ENST00000422998 EIF4G1Q04637 1599 aaKnown RBP33.87■■■■□ 3.01
DENND1B-205ENST00000422998 DNAJC5BQ9UF47 199 aa33.72■■■□□ 2.99
DENND1B-205ENST00000422998 CECR2Q9BXF3 1484 aa33.62■■■□□ 2.97
DENND1B-205ENST00000422998 CC2D2AQ9P2K1 1620 aa33.6■■■□□ 2.97
DENND1B-205ENST00000422998 BAZ1AQ9NRL2 1556 aaPredicted RBP33.56■■■□□ 2.96
DENND1B-205ENST00000422998 SMARCA4P51532 1647 aa33.51■■■□□ 2.96
DENND1B-205ENST00000422998 PEG3Q9GZU2 1588 aa33.33■■■□□ 2.93
DENND1B-205ENST00000422998 MROH2BQ7Z745 1585 aa33.32■■■□□ 2.92
DENND1B-205ENST00000422998 NCAPD3P42695 1498 aa33.29■■■□□ 2.92
DENND1B-205ENST00000422998 SMARCA2P51531 1590 aa33.28■■■□□ 2.92
DENND1B-205ENST00000422998 ATAD2BQ9ULI0 1458 aa33.27■■■□□ 2.92
DENND1B-205ENST00000422998 HMGXB3Q12766 1538 aa33.13■■■□□ 2.89
DENND1B-205ENST00000422998 RSF1Q96T23 1441 aaPredicted RBP33.12■■■□□ 2.89
DENND1B-205ENST00000422998 BAZ1BQ9UIG0 1483 aaKnown RBP32.95■■■□□ 2.87
DENND1B-205ENST00000422998 WIZO95785 1651 aa32.92■■■□□ 2.86
DENND1B-205ENST00000422998 TOP2AP11388 1531 aaKnown RBP32.71■■■□□ 2.83
DENND1B-205ENST00000422998 LAMC3Q9Y6N6 1575 aa32.3■■■□□ 2.76
DENND1B-205ENST00000422998 CCDC88BA6NC98 1476 aa32.29■■■□□ 2.76
DENND1B-205ENST00000422998 SUPT5HO00267 1087 aaKnown RBP32.27■■■□□ 2.76
DENND1B-205ENST00000422998 CADPSQ9ULU8 1353 aa32.27■■■□□ 2.76
DENND1B-205ENST00000422998 CFTRP13569 1480 aa32.18■■■□□ 2.74
DENND1B-205ENST00000422998 NESP48681 1621 aa32.15■■■□□ 2.74
DENND1B-205ENST00000422998 PDS5BQ9NTI5 1447 aa32.06■■■□□ 2.72
DENND1B-205ENST00000422998 PRDM2Q13029 1718 aa31.92■■■□□ 2.7
DENND1B-205ENST00000422998 ERCC6Q03468 1493 aa31.9■■■□□ 2.7
DENND1B-205ENST00000422998 FANCD2Q9BXW9 1451 aa31.83■■■□□ 2.69
DENND1B-205ENST00000422998 KIF21AQ7Z4S6 1674 aa31.81■■■□□ 2.68
DENND1B-205ENST00000422998 CEP164Q9UPV0 1460 aa31.76■■■□□ 2.67
DENND1B-205ENST00000422998 THOC2Q8NI27 1593 aaKnown RBP31.7■■■□□ 2.67
DENND1B-205ENST00000422998 MRC2Q9UBG0 1479 aa31.66■■■□□ 2.66
DENND1B-205ENST00000422998 CUX2O14529 1486 aa31.63■■■□□ 2.65
DENND1B-205ENST00000422998 WDR62O43379 1518 aa31.59■■■□□ 2.65
DENND1B-205ENST00000422998 ABCC8Q09428 1581 aa31.51■■■□□ 2.64
DENND1B-205ENST00000422998 URB2Q14146 1524 aaKnown RBP31.49■■■□□ 2.63
DENND1B-205ENST00000422998 DNMBPQ6XZF7 1577 aa31.39■■■□□ 2.62
DENND1B-205ENST00000422998 TOPBP1Q92547 1522 aa31.38■■■□□ 2.61
DENND1B-205ENST00000422998 CUX1P39880 1505 aa31.25■■■□□ 2.59
DENND1B-205ENST00000422998 WRNQ14191 1432 aaPredicted RBP eCLIP31.19■■■□□ 2.58
DENND1B-205ENST00000422998 POLA1P09884 1462 aaPredicted RBP31.14■■■□□ 2.57
DENND1B-205ENST00000422998 IFT140Q96RY7 1462 aa31.14■■■□□ 2.57
DENND1B-205ENST00000422998 TOP2BQ02880 1626 aa31.13■■■□□ 2.57
DENND1B-205ENST00000422998 BIVM-ERCC5R4GMW8 1640 aa31.12■■■□□ 2.57
DENND1B-205ENST00000422998 FGD5Q6ZNL6 1462 aa31.07■■■□□ 2.56
DENND1B-205ENST00000422998 SYNJ1O43426 1573 aa31.05■■■□□ 2.56
DENND1B-205ENST00000422998 TARBP1Q13395 1621 aaKnown RBP31.04■■■□□ 2.56
DENND1B-205ENST00000422998 SOGA1O94964 1423 aa30.99■■■□□ 2.55
DENND1B-205ENST00000422998 WDR97A6NE52 1622 aa30.95■■■□□ 2.55
DENND1B-205ENST00000422998 RAD54L2Q9Y4B4 1467 aa30.9■■■□□ 2.54
DENND1B-205ENST00000422998 ABCA10Q8WWZ4 1543 aa30.89■■■□□ 2.54
DENND1B-205ENST00000422998 ZNF608Q9ULD9 1512 aaPredicted RBP30.86■■■□□ 2.53
DENND1B-205ENST00000422998 EIF4G3O43432 1585 aaKnown RBP30.77■■■□□ 2.52
DENND1B-205ENST00000422998 AQRO60306 1485 aaKnown RBP eCLIP30.71■■■□□ 2.51
DENND1B-205ENST00000422998 TDRD9Q8NDG6 1382 aaKnown RBP30.71■■■□□ 2.51
DENND1B-205ENST00000422998 ABCA5Q8WWZ7 1642 aa30.69■■■□□ 2.5
DENND1B-205ENST00000422998 GAPVD1Q14C86 1478 aa30.65■■■□□ 2.5
DENND1B-205ENST00000422998 GRIN2BQ13224 1484 aa30.63■■■□□ 2.49
DENND1B-205ENST00000422998 TRIM41Q8WV44 630 aa30.59■■■□□ 2.49
DENND1B-205ENST00000422998 MAGI1Q96QZ7 1491 aaPredicted RBP30.56■■■□□ 2.48
DENND1B-205ENST00000422998 ERICH3Q5RHP9 1530 aa30.53■■■□□ 2.48
DENND1B-205ENST00000422998 KIF27Q86VH2 1401 aa30.53■■■□□ 2.48
DENND1B-205ENST00000422998 PBRM1Q86U86 1689 aa30.52■■■□□ 2.48
DENND1B-205ENST00000422998 CHIC1Q5VXU3 224 aa30.49■■■□□ 2.47
DENND1B-205ENST00000422998 SNAPC4Q5SXM2 1469 aa30.46■■■□□ 2.47
DENND1B-205ENST00000422998 SYNJ2O15056 1496 aa30.4■■■□□ 2.46
DENND1B-205ENST00000422998 IGF1RP08069 1367 aa30.39■■■□□ 2.45
DENND1B-205ENST00000422998 FHAD1B1AJZ9 1412 aa30.36■■■□□ 2.45
DENND1B-205ENST00000422998 ADAMTS12P58397 1594 aa30.35■■■□□ 2.45
DENND1B-205ENST00000422998 OSCARQ8IYS5 282 aa30.3■■■□□ 2.44
DENND1B-205ENST00000422998 CUL7Q14999 1698 aa30.29■■■□□ 2.44
DENND1B-205ENST00000422998 CHD1O14646 1710 aa30.28■■■□□ 2.44
DENND1B-205ENST00000422998 EEA1Q15075 1411 aa30.27■■■□□ 2.44
DENND1B-205ENST00000422998 CHMP7Q8WUX9 453 aaPredicted RBP30.26■■■□□ 2.43
DENND1B-205ENST00000422998 RUSC2Q8N2Y8 1516 aa30.24■■■□□ 2.43
DENND1B-205ENST00000422998 GRIN2AQ12879 1464 aa30.22■■■□□ 2.43
DENND1B-205ENST00000422998 DNAJC5Q9H3Z4 198 aa30.21■■■□□ 2.43
DENND1B-205ENST00000422998 CARMIL1Q5VZK9 1371 aa30.17■■■□□ 2.42
DENND1B-205ENST00000422998 NUP160Q12769 1436 aa30.14■■■□□ 2.42
DENND1B-205ENST00000422998 FBLN2P98095 1184 aa30.14■■■□□ 2.42
DENND1B-205ENST00000422998 PRXQ9BXM0 1461 aa30.09■■■□□ 2.41
DENND1B-205ENST00000422998 CLASP1Q7Z460 1538 aa30.08■■■□□ 2.41
DENND1B-205ENST00000422998 CSRNP3Q8WYN3 585 aa30.06■■■□□ 2.4
DENND1B-205ENST00000422998 RAPGEF2Q9Y4G8 1499 aa30.05■■■□□ 2.4
DENND1B-205ENST00000422998 CEP170Q5SW79 1584 aa30.01■■■□□ 2.39
DENND1B-205ENST00000422998 KIAA0586Q9BVV6 1533 aa29.92■■■□□ 2.38
DENND1B-205ENST00000422998 SHROOM2Q13796 1616 aa29.86■■■□□ 2.37
DENND1B-205ENST00000422998 KIF21BO75037 1637 aa29.85■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms