RNA–Protein interactions for RNA: ENST00000422701.1

PFKFB4-206, Transcript of 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4, humanhuman

TSL 3

Gene PFKFB4, Length 636 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFKFB4-206ENST00000422701 NISCHQ9Y2I1 1504 aa36.95■■■■□ 3.51
PFKFB4-206ENST00000422701 CCDC180Q9P1Z9 1646 aa32.67■■■□□ 2.82
PFKFB4-206ENST00000422701 ABCC9O60706 1549 aa31.46■■■□□ 2.63
PFKFB4-206ENST00000422701 ZCCHC6Q5VYS8 1495 aaKnown RBP30.91■■■□□ 2.54
PFKFB4-206ENST00000422701 DCAF1Q9Y4B6 1507 aa30.63■■■□□ 2.49
PFKFB4-206ENST00000422701 NACADO15069 1562 aa30.59■■■□□ 2.49
PFKFB4-206ENST00000422701 MYO15BQ96JP2 1530 aa30.59■■■□□ 2.49
PFKFB4-206ENST00000422701 DCAF8L2P0C7V8 631 aa30.57■■■□□ 2.48
PFKFB4-206ENST00000422701 RB1CC1Q8TDY2 1594 aa30.5■■■□□ 2.47
PFKFB4-206ENST00000422701 SCRIBQ14160 1630 aa29.82■■■□□ 2.36
PFKFB4-206ENST00000422701 UNC13AQ9UPW8 1703 aa29.8■■■□□ 2.36
PFKFB4-206ENST00000422701 BICRAQ9NZM4 1560 aa29.57■■■□□ 2.32
PFKFB4-206ENST00000422701 PABPN1Q86U42 306 aaKnown RBP eCLIP29.44■■■□□ 2.3
PFKFB4-206ENST00000422701 SHROOM4Q9ULL8 1493 aa29.42■■■□□ 2.3
PFKFB4-206ENST00000422701 EIF4G1Q04637 1599 aaKnown RBP28.75■■■□□ 2.19
PFKFB4-206ENST00000422701 CECR2Q9BXF3 1484 aa28.72■■■□□ 2.19
PFKFB4-206ENST00000422701 BAZ1AQ9NRL2 1556 aaPredicted RBP28.62■■■□□ 2.17
PFKFB4-206ENST00000422701 SMARCA4P51532 1647 aa28.58■■■□□ 2.17
PFKFB4-206ENST00000422701 CC2D2AQ9P2K1 1620 aa28.5■■■□□ 2.15
PFKFB4-206ENST00000422701 MROH2BQ7Z745 1585 aa28.48■■■□□ 2.15
PFKFB4-206ENST00000422701 DNAJC5BQ9UF47 199 aa28.42■■■□□ 2.14
PFKFB4-206ENST00000422701 RSF1Q96T23 1441 aaPredicted RBP28.33■■■□□ 2.13
PFKFB4-206ENST00000422701 PEG3Q9GZU2 1588 aa28.32■■■□□ 2.12
PFKFB4-206ENST00000422701 SMARCA2P51531 1590 aa28.3■■■□□ 2.12
PFKFB4-206ENST00000422701 ATAD2BQ9ULI0 1458 aa28.29■■■□□ 2.12
PFKFB4-206ENST00000422701 NCAPD3P42695 1498 aa28.21■■■□□ 2.11
PFKFB4-206ENST00000422701 WIZO95785 1651 aa28.19■■■□□ 2.1
PFKFB4-206ENST00000422701 HMGXB3Q12766 1538 aa28.15■■■□□ 2.1
PFKFB4-206ENST00000422701 BAZ1BQ9UIG0 1483 aaKnown RBP28.09■■■□□ 2.09
PFKFB4-206ENST00000422701 TOP2AP11388 1531 aaKnown RBP27.95■■■□□ 2.06
PFKFB4-206ENST00000422701 SUPT5HO00267 1087 aaKnown RBP27.88■■■□□ 2.05
PFKFB4-206ENST00000422701 CCDC88BA6NC98 1476 aa27.58■■■□□ 2.01
PFKFB4-206ENST00000422701 LAMC3Q9Y6N6 1575 aa27.4■■□□□ 1.98
PFKFB4-206ENST00000422701 CADPSQ9ULU8 1353 aa27.4■■□□□ 1.98
PFKFB4-206ENST00000422701 NESP48681 1621 aa27.37■■□□□ 1.97
PFKFB4-206ENST00000422701 CFTRP13569 1480 aa27.36■■□□□ 1.97
PFKFB4-206ENST00000422701 PRDM2Q13029 1718 aa27.19■■□□□ 1.94
PFKFB4-206ENST00000422701 PDS5BQ9NTI5 1447 aa27.18■■□□□ 1.94
PFKFB4-206ENST00000422701 FANCD2Q9BXW9 1451 aa27.1■■□□□ 1.93
PFKFB4-206ENST00000422701 ERCC6Q03468 1493 aa27.09■■□□□ 1.93
PFKFB4-206ENST00000422701 KIF21AQ7Z4S6 1674 aa27.08■■□□□ 1.92
PFKFB4-206ENST00000422701 CEP164Q9UPV0 1460 aa27.03■■□□□ 1.92
PFKFB4-206ENST00000422701 THOC2Q8NI27 1593 aaKnown RBP26.9■■□□□ 1.9
PFKFB4-206ENST00000422701 MRC2Q9UBG0 1479 aa26.89■■□□□ 1.9
PFKFB4-206ENST00000422701 WDR62O43379 1518 aa26.8■■□□□ 1.88
PFKFB4-206ENST00000422701 URB2Q14146 1524 aaKnown RBP26.8■■□□□ 1.88
PFKFB4-206ENST00000422701 ABCC8Q09428 1581 aa26.74■■□□□ 1.87
PFKFB4-206ENST00000422701 DNMBPQ6XZF7 1577 aa26.74■■□□□ 1.87
PFKFB4-206ENST00000422701 TOPBP1Q92547 1522 aa26.72■■□□□ 1.87
PFKFB4-206ENST00000422701 WRNQ14191 1432 aaPredicted RBP eCLIP26.7■■□□□ 1.86
PFKFB4-206ENST00000422701 CUX1P39880 1505 aa26.7■■□□□ 1.86
PFKFB4-206ENST00000422701 CUX2O14529 1486 aa26.67■■□□□ 1.86
PFKFB4-206ENST00000422701 SYNJ1O43426 1573 aa26.61■■□□□ 1.85
PFKFB4-206ENST00000422701 TOP2BQ02880 1626 aa26.6■■□□□ 1.85
PFKFB4-206ENST00000422701 BIVM-ERCC5R4GMW8 1640 aa26.6■■□□□ 1.85
PFKFB4-206ENST00000422701 POLA1P09884 1462 aaPredicted RBP26.53■■□□□ 1.84
PFKFB4-206ENST00000422701 FGD5Q6ZNL6 1462 aa26.53■■□□□ 1.84
PFKFB4-206ENST00000422701 IFT140Q96RY7 1462 aa26.44■■□□□ 1.82
PFKFB4-206ENST00000422701 SOGA1O94964 1423 aa26.39■■□□□ 1.82
PFKFB4-206ENST00000422701 TARBP1Q13395 1621 aaKnown RBP26.39■■□□□ 1.82
PFKFB4-206ENST00000422701 RAD54L2Q9Y4B4 1467 aa26.38■■□□□ 1.81
PFKFB4-206ENST00000422701 CHIC1Q5VXU3 224 aa26.32■■□□□ 1.8
PFKFB4-206ENST00000422701 TRIM41Q8WV44 630 aa26.32■■□□□ 1.8
PFKFB4-206ENST00000422701 WDR97A6NE52 1622 aa26.32■■□□□ 1.8
PFKFB4-206ENST00000422701 ABCA10Q8WWZ4 1543 aa26.31■■□□□ 1.8
PFKFB4-206ENST00000422701 ZNF608Q9ULD9 1512 aaPredicted RBP26.26■■□□□ 1.79
PFKFB4-206ENST00000422701 EIF4G3O43432 1585 aaKnown RBP26.21■■□□□ 1.79
PFKFB4-206ENST00000422701 TDRD9Q8NDG6 1382 aaKnown RBP26.18■■□□□ 1.78
PFKFB4-206ENST00000422701 ABCA5Q8WWZ7 1642 aa26.17■■□□□ 1.78
PFKFB4-206ENST00000422701 AQRO60306 1485 aaKnown RBP eCLIP26.16■■□□□ 1.782e-9■■■■■ 27.7
PFKFB4-206ENST00000422701 GAPVD1Q14C86 1478 aa26.12■■□□□ 1.77
PFKFB4-206ENST00000422701 KIF27Q86VH2 1401 aa26.1■■□□□ 1.77
PFKFB4-206ENST00000422701 GRIN2BQ13224 1484 aa26.06■■□□□ 1.76
PFKFB4-206ENST00000422701 PBRM1Q86U86 1689 aa26.04■■□□□ 1.76
PFKFB4-206ENST00000422701 ERICH3Q5RHP9 1530 aa26■■□□□ 1.75
PFKFB4-206ENST00000422701 RUSC2Q8N2Y8 1516 aa25.98■■□□□ 1.75
PFKFB4-206ENST00000422701 SNAPC4Q5SXM2 1469 aa25.96■■□□□ 1.75
PFKFB4-206ENST00000422701 MAGI1Q96QZ7 1491 aaPredicted RBP25.96■■□□□ 1.75
PFKFB4-206ENST00000422701 EEA1Q15075 1411 aa25.93■■□□□ 1.74
PFKFB4-206ENST00000422701 IGF1RP08069 1367 aa25.91■■□□□ 1.74
PFKFB4-206ENST00000422701 ADAMTS12P58397 1594 aa25.89■■□□□ 1.73
PFKFB4-206ENST00000422701 CUL7Q14999 1698 aa25.86■■□□□ 1.73
PFKFB4-206ENST00000422701 SYNJ2O15056 1496 aa25.85■■□□□ 1.73
PFKFB4-206ENST00000422701 FHAD1B1AJZ9 1412 aa25.84■■□□□ 1.73
PFKFB4-206ENST00000422701 CARMIL1Q5VZK9 1371 aa25.77■■□□□ 1.72
PFKFB4-206ENST00000422701 CHD1O14646 1710 aa25.77■■□□□ 1.72
PFKFB4-206ENST00000422701 CSRNP3Q8WYN3 585 aa25.76■■□□□ 1.71
PFKFB4-206ENST00000422701 FAM9AQ8IZU1 332 aaPredicted RBP25.75■■□□□ 1.71
PFKFB4-206ENST00000422701 CHMP7Q8WUX9 453 aaPredicted RBP25.74■■□□□ 1.71
PFKFB4-206ENST00000422701 GRIN2AQ12879 1464 aa25.73■■□□□ 1.71
PFKFB4-206ENST00000422701 PRXQ9BXM0 1461 aa25.73■■□□□ 1.71
PFKFB4-206ENST00000422701 FBLN2P98095 1184 aa25.71■■□□□ 1.71
PFKFB4-206ENST00000422701 RAPGEF2Q9Y4G8 1499 aa25.69■■□□□ 1.7
PFKFB4-206ENST00000422701 KIF21BO75037 1637 aa25.63■■□□□ 1.69
PFKFB4-206ENST00000422701 NUP160Q12769 1436 aa25.61■■□□□ 1.69
PFKFB4-206ENST00000422701 CEP170Q5SW79 1584 aa25.59■■□□□ 1.69
PFKFB4-206ENST00000422701 OSCARQ8IYS5 282 aa25.58■■□□□ 1.69
PFKFB4-206ENST00000422701 CLASP1Q7Z460 1538 aa25.53■■□□□ 1.68
PFKFB4-206ENST00000422701 GOLGA3Q08378 1498 aa25.5■■□□□ 1.67
PFKFB4-206ENST00000422701 KIAA0586Q9BVV6 1533 aa25.47■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms