RNA–Protein interactions for RNA: ENST00000422471.5

APOL1-204, Transcript of apolipoprotein L1, humanhuman

TSL 4

Gene APOL1, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOL1-204ENST00000422471 NISCHQ9Y2I1 1504 aa31.08■■■□□ 2.57
APOL1-204ENST00000422471 CCDC180Q9P1Z9 1646 aa27.48■■□□□ 1.99
APOL1-204ENST00000422471 ABCC9O60706 1549 aa26.3■■□□□ 1.8
APOL1-204ENST00000422471 ZCCHC6Q5VYS8 1495 aaKnown RBP25.98■■□□□ 1.75
APOL1-204ENST00000422471 DCAF1Q9Y4B6 1507 aa25.85■■□□□ 1.73
APOL1-204ENST00000422471 MYO15BQ96JP2 1530 aa25.83■■□□□ 1.72
APOL1-204ENST00000422471 NACADO15069 1562 aa25.74■■□□□ 1.71
APOL1-204ENST00000422471 DCAF8L2P0C7V8 631 aa25.65■■□□□ 1.7
APOL1-204ENST00000422471 RB1CC1Q8TDY2 1594 aa25.64■■□□□ 1.69
APOL1-204ENST00000422471 SCRIBQ14160 1630 aa24.95■■□□□ 1.58
APOL1-204ENST00000422471 UNC13AQ9UPW8 1703 aa24.92■■□□□ 1.58
APOL1-204ENST00000422471 SHROOM4Q9ULL8 1493 aa24.76■■□□□ 1.55
APOL1-204ENST00000422471 BICRAQ9NZM4 1560 aa24.76■■□□□ 1.55
APOL1-204ENST00000422471 PABPN1Q86U42 306 aaKnown RBP eCLIP24.62■■□□□ 1.53
APOL1-204ENST00000422471 EIF4G1Q04637 1599 aaKnown RBP24.09■■□□□ 1.45
APOL1-204ENST00000422471 BAZ1AQ9NRL2 1556 aaPredicted RBP24.09■■□□□ 1.45
APOL1-204ENST00000422471 CECR2Q9BXF3 1484 aa24.06■■□□□ 1.44
APOL1-204ENST00000422471 SMARCA4P51532 1647 aa23.99■■□□□ 1.43
APOL1-204ENST00000422471 MROH2BQ7Z745 1585 aa23.89■■□□□ 1.41
APOL1-204ENST00000422471 CC2D2AQ9P2K1 1620 aa23.85■■□□□ 1.41
APOL1-204ENST00000422471 PEG3Q9GZU2 1588 aa23.83■■□□□ 1.41
APOL1-204ENST00000422471 SMARCA2P51531 1590 aa23.82■■□□□ 1.4
APOL1-204ENST00000422471 RSF1Q96T23 1441 aaPredicted RBP23.82■■□□□ 1.4
APOL1-204ENST00000422471 ATAD2BQ9ULI0 1458 aa23.77■■□□□ 1.4
APOL1-204ENST00000422471 NCAPD3P42695 1498 aa23.75■■□□□ 1.39
APOL1-204ENST00000422471 DNAJC5BQ9UF47 199 aa23.68■■□□□ 1.38
APOL1-204ENST00000422471 HMGXB3Q12766 1538 aa23.67■■□□□ 1.38
APOL1-204ENST00000422471 WIZO95785 1651 aa23.61■■□□□ 1.37
APOL1-204ENST00000422471 BAZ1BQ9UIG0 1483 aaKnown RBP23.6■■□□□ 1.37
APOL1-204ENST00000422471 TOP2AP11388 1531 aaKnown RBP23.49■■□□□ 1.35
APOL1-204ENST00000422471 SUPT5HO00267 1087 aaKnown RBP23.46■■□□□ 1.35
APOL1-204ENST00000422471 CCDC88BA6NC98 1476 aa23.17■■□□□ 1.3
APOL1-204ENST00000422471 CADPSQ9ULU8 1353 aa23.05■■□□□ 1.28
APOL1-204ENST00000422471 LAMC3Q9Y6N6 1575 aa23.04■■□□□ 1.28
APOL1-204ENST00000422471 CFTRP13569 1480 aa23.01■■□□□ 1.27
APOL1-204ENST00000422471 PDS5BQ9NTI5 1447 aa22.89■■□□□ 1.25
APOL1-204ENST00000422471 NESP48681 1621 aa22.86■■□□□ 1.25
APOL1-204ENST00000422471 PRDM2Q13029 1718 aa22.84■■□□□ 1.25
APOL1-204ENST00000422471 FANCD2Q9BXW9 1451 aa22.75■■□□□ 1.23
APOL1-204ENST00000422471 ERCC6Q03468 1493 aa22.71■■□□□ 1.23
APOL1-204ENST00000422471 CEP164Q9UPV0 1460 aa22.7■■□□□ 1.22
APOL1-204ENST00000422471 KIF21AQ7Z4S6 1674 aa22.62■■□□□ 1.21
APOL1-204ENST00000422471 ABCC8Q09428 1581 aa22.59■■□□□ 1.21
APOL1-204ENST00000422471 MRC2Q9UBG0 1479 aa22.57■■□□□ 1.2
APOL1-204ENST00000422471 THOC2Q8NI27 1593 aaKnown RBP22.5■■□□□ 1.19
APOL1-204ENST00000422471 WDR62O43379 1518 aa22.48■■□□□ 1.19
APOL1-204ENST00000422471 WRNQ14191 1432 aaPredicted RBP eCLIP22.48■■□□□ 1.19
APOL1-204ENST00000422471 DNMBPQ6XZF7 1577 aa22.47■■□□□ 1.19
APOL1-204ENST00000422471 URB2Q14146 1524 aaKnown RBP22.45■■□□□ 1.18
APOL1-204ENST00000422471 TOPBP1Q92547 1522 aa22.43■■□□□ 1.18
APOL1-204ENST00000422471 CUX1P39880 1505 aa22.39■■□□□ 1.17
APOL1-204ENST00000422471 CUX2O14529 1486 aa22.39■■□□□ 1.17
APOL1-204ENST00000422471 TOP2BQ02880 1626 aa22.38■■□□□ 1.17
APOL1-204ENST00000422471 BIVM-ERCC5R4GMW8 1640 aa22.36■■□□□ 1.17
APOL1-204ENST00000422471 SYNJ1O43426 1573 aa22.31■■□□□ 1.16
APOL1-204ENST00000422471 POLA1P09884 1462 aaPredicted RBP22.27■■□□□ 1.16
APOL1-204ENST00000422471 FGD5Q6ZNL6 1462 aa22.26■■□□□ 1.15
APOL1-204ENST00000422471 IFT140Q96RY7 1462 aa22.23■■□□□ 1.15
APOL1-204ENST00000422471 TRIM41Q8WV44 630 aa22.23■■□□□ 1.15
APOL1-204ENST00000422471 CHIC1Q5VXU3 224 aa22.22■■□□□ 1.15
APOL1-204ENST00000422471 SOGA1O94964 1423 aa22.2■■□□□ 1.14
APOL1-204ENST00000422471 WDR97A6NE52 1622 aa22.14■■□□□ 1.14
APOL1-204ENST00000422471 TARBP1Q13395 1621 aaKnown RBP22.14■■□□□ 1.14
APOL1-204ENST00000422471 ABCA10Q8WWZ4 1543 aa22.14■■□□□ 1.13
APOL1-204ENST00000422471 RAD54L2Q9Y4B4 1467 aa22.09■■□□□ 1.13
APOL1-204ENST00000422471 KIF27Q86VH2 1401 aa22■■□□□ 1.11
APOL1-204ENST00000422471 ZNF608Q9ULD9 1512 aaPredicted RBP21.96■■□□□ 1.11
APOL1-204ENST00000422471 ABCA5Q8WWZ7 1642 aa21.96■■□□□ 1.11
APOL1-204ENST00000422471 TDRD9Q8NDG6 1382 aaKnown RBP21.96■■□□□ 1.11
APOL1-204ENST00000422471 EEA1Q15075 1411 aa21.96■■□□□ 1.11
APOL1-204ENST00000422471 GAPVD1Q14C86 1478 aa21.96■■□□□ 1.11
APOL1-204ENST00000422471 EIF4G3O43432 1585 aaKnown RBP21.94■■□□□ 1.1
APOL1-204ENST00000422471 AQRO60306 1485 aaKnown RBP eCLIP21.92■■□□□ 1.13e-6■■■□□ 17
APOL1-204ENST00000422471 GRIN2BQ13224 1484 aa21.92■■□□□ 1.1
APOL1-204ENST00000422471 ERICH3Q5RHP9 1530 aa21.9■■□□□ 1.1
APOL1-204ENST00000422471 MAGI1Q96QZ7 1491 aaPredicted RBP21.83■■□□□ 1.09
APOL1-204ENST00000422471 PBRM1Q86U86 1689 aa21.82■■□□□ 1.08
APOL1-204ENST00000422471 IGF1RP08069 1367 aa21.82■■□□□ 1.08
APOL1-204ENST00000422471 DNAJC5Q9H3Z4 198 aa21.8■■□□□ 1.08
APOL1-204ENST00000422471 RUSC2Q8N2Y8 1516 aa21.77■■□□□ 1.08
APOL1-204ENST00000422471 CUL7Q14999 1698 aa21.77■■□□□ 1.08
APOL1-204ENST00000422471 CSRNP3Q8WYN3 585 aa21.76■■□□□ 1.07
APOL1-204ENST00000422471 SNAPC4Q5SXM2 1469 aa21.76■■□□□ 1.07
APOL1-204ENST00000422471 FHAD1B1AJZ9 1412 aa21.75■■□□□ 1.07
APOL1-204ENST00000422471 SYNJ2O15056 1496 aa21.71■■□□□ 1.07
APOL1-204ENST00000422471 ADAMTS12P58397 1594 aa21.71■■□□□ 1.07
APOL1-204ENST00000422471 CARMIL1Q5VZK9 1371 aa21.7■■□□□ 1.06
APOL1-204ENST00000422471 PRXQ9BXM0 1461 aa21.68■■□□□ 1.06
APOL1-204ENST00000422471 CHMP7Q8WUX9 453 aaPredicted RBP21.65■■□□□ 1.06
APOL1-204ENST00000422471 RAPGEF2Q9Y4G8 1499 aa21.64■■□□□ 1.06
APOL1-204ENST00000422471 GRIN2AQ12879 1464 aa21.61■■□□□ 1.05
APOL1-204ENST00000422471 FAM9AQ8IZU1 332 aaPredicted RBP21.61■■□□□ 1.05
APOL1-204ENST00000422471 KIF21BO75037 1637 aa21.59■■□□□ 1.05
APOL1-204ENST00000422471 FBLN2P98095 1184 aa21.56■■□□□ 1.04
APOL1-204ENST00000422471 CHD1O14646 1710 aa21.54■■□□□ 1.04
APOL1-204ENST00000422471 NUP160Q12769 1436 aa21.52■■□□□ 1.04
APOL1-204ENST00000422471 GOLGA3Q08378 1498 aa21.51■■□□□ 1.03
APOL1-204ENST00000422471 OSCARQ8IYS5 282 aa21.5■■□□□ 1.03
APOL1-204ENST00000422471 KIAA0586Q9BVV6 1533 aa21.45■■□□□ 1.02
APOL1-204ENST00000422471 CEP170Q5SW79 1584 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms