RNA–Protein interactions for RNA: ENST00000422352.5

LINC00658-203, long intergenic non-protein coding RNA 658, humanhuman

TSL 3

Gene LINC00658, Length 675 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00658-203ENST00000422352 NISCHQ9Y2I1 1504 aa18.41■□□□□ 0.54
LINC00658-203ENST00000422352 ABCC9O60706 1549 aa16.3■□□□□ 0.2
LINC00658-203ENST00000422352 CCDC180Q9P1Z9 1646 aa16.3■□□□□ 0.2
LINC00658-203ENST00000422352 DCAF8L2P0C7V8 631 aa15.67■□□□□ 0.1
LINC00658-203ENST00000422352 RB1CC1Q8TDY2 1594 aa15.53■□□□□ 0.08
LINC00658-203ENST00000422352 NACADO15069 1562 aa15.47■□□□□ 0.07
LINC00658-203ENST00000422352 MYO15BQ96JP2 1530 aa15.32■□□□□ 0.04
LINC00658-203ENST00000422352 PABPN1Q86U42 306 aaKnown RBP eCLIP15.3■□□□□ 0.04
LINC00658-203ENST00000422352 ZCCHC6Q5VYS8 1495 aaKnown RBP15.27■□□□□ 0.04
LINC00658-203ENST00000422352 DCAF1Q9Y4B6 1507 aa15.18■□□□□ 0.02
LINC00658-203ENST00000422352 DNAJC5BQ9UF47 199 aa15.17■□□□□ 0.02
LINC00658-203ENST00000422352 BICRAQ9NZM4 1560 aa15.02□□□□□ -0.01
LINC00658-203ENST00000422352 UNC13AQ9UPW8 1703 aa14.98□□□□□ -0.01
LINC00658-203ENST00000422352 SCRIBQ14160 1630 aa14.95□□□□□ -0.02
LINC00658-203ENST00000422352 SHROOM4Q9ULL8 1493 aa14.88□□□□□ -0.03
LINC00658-203ENST00000422352 EIF4G1Q04637 1599 aaKnown RBP14.68□□□□□ -0.06
LINC00658-203ENST00000422352 CECR2Q9BXF3 1484 aa14.67□□□□□ -0.06
LINC00658-203ENST00000422352 CC2D2AQ9P2K1 1620 aa14.65□□□□□ -0.06
LINC00658-203ENST00000422352 NCAPD3P42695 1498 aa14.33□□□□□ -0.12
LINC00658-203ENST00000422352 ATAD2BQ9ULI0 1458 aa14.31□□□□□ -0.12
LINC00658-203ENST00000422352 SMARCA4P51532 1647 aa14.26□□□□□ -0.13
LINC00658-203ENST00000422352 BAZ1AQ9NRL2 1556 aaPredicted RBP14.26□□□□□ -0.13
LINC00658-203ENST00000422352 SMARCA2P51531 1590 aa14.25□□□□□ -0.13
LINC00658-203ENST00000422352 BAZ1BQ9UIG0 1483 aaKnown RBP14.19□□□□□ -0.14
LINC00658-203ENST00000422352 MROH2BQ7Z745 1585 aa14.18□□□□□ -0.14
LINC00658-203ENST00000422352 HMGXB3Q12766 1538 aa14.17□□□□□ -0.14
LINC00658-203ENST00000422352 PEG3Q9GZU2 1588 aa14.11□□□□□ -0.15
LINC00658-203ENST00000422352 ERCC6Q03468 1493 aa14.09□□□□□ -0.15
LINC00658-203ENST00000422352 NESP48681 1621 aa14.03□□□□□ -0.16
LINC00658-203ENST00000422352 RSF1Q96T23 1441 aaPredicted RBP14.01□□□□□ -0.17
LINC00658-203ENST00000422352 WIZO95785 1651 aa13.96□□□□□ -0.17
LINC00658-203ENST00000422352 CADPSQ9ULU8 1353 aa13.96□□□□□ -0.18
LINC00658-203ENST00000422352 CUX2O14529 1486 aa13.94□□□□□ -0.18
LINC00658-203ENST00000422352 PDS5BQ9NTI5 1447 aa13.94□□□□□ -0.18
LINC00658-203ENST00000422352 LAMC3Q9Y6N6 1575 aa13.92□□□□□ -0.18
LINC00658-203ENST00000422352 TOP2AP11388 1531 aaKnown RBP13.84□□□□□ -0.19
LINC00658-203ENST00000422352 DNAJC5Q9H3Z4 198 aa13.81□□□□□ -0.2
LINC00658-203ENST00000422352 CFTRP13569 1480 aa13.78□□□□□ -0.2
LINC00658-203ENST00000422352 FANCD2Q9BXW9 1451 aa13.75□□□□□ -0.21
LINC00658-203ENST00000422352 MRC2Q9UBG0 1479 aa13.75□□□□□ -0.21
LINC00658-203ENST00000422352 THOC2Q8NI27 1593 aaKnown RBP13.75□□□□□ -0.21
LINC00658-203ENST00000422352 CEP164Q9UPV0 1460 aa13.74□□□□□ -0.21
LINC00658-203ENST00000422352 CCDC88BA6NC98 1476 aa13.74□□□□□ -0.21
LINC00658-203ENST00000422352 KIF21AQ7Z4S6 1674 aa13.72□□□□□ -0.21
LINC00658-203ENST00000422352 WDR62O43379 1518 aa13.66□□□□□ -0.22
LINC00658-203ENST00000422352 SUPT5HO00267 1087 aaKnown RBP13.65□□□□□ -0.22
LINC00658-203ENST00000422352 URB2Q14146 1524 aaKnown RBP13.59□□□□□ -0.23
LINC00658-203ENST00000422352 ABCC8Q09428 1581 aa13.49□□□□□ -0.25
LINC00658-203ENST00000422352 TOPBP1Q92547 1522 aa13.49□□□□□ -0.25
LINC00658-203ENST00000422352 IFT140Q96RY7 1462 aa13.48□□□□□ -0.25
LINC00658-203ENST00000422352 OSCARQ8IYS5 282 aa13.45□□□□□ -0.26
LINC00658-203ENST00000422352 DNMBPQ6XZF7 1577 aa13.42□□□□□ -0.26
LINC00658-203ENST00000422352 ZNF608Q9ULD9 1512 aaPredicted RBP13.42□□□□□ -0.26
LINC00658-203ENST00000422352 PRDM2Q13029 1718 aa13.42□□□□□ -0.26
LINC00658-203ENST00000422352 SOGA1O94964 1423 aa13.38□□□□□ -0.27
LINC00658-203ENST00000422352 POLA1P09884 1462 aaPredicted RBP13.37□□□□□ -0.27
LINC00658-203ENST00000422352 AQRO60306 1485 aaKnown RBP eCLIP13.36□□□□□ -0.27
LINC00658-203ENST00000422352 RAD54L2Q9Y4B4 1467 aa13.35□□□□□ -0.27
LINC00658-203ENST00000422352 TDRD9Q8NDG6 1382 aaKnown RBP13.34□□□□□ -0.27
LINC00658-203ENST00000422352 TRIM41Q8WV44 630 aa13.34□□□□□ -0.27
LINC00658-203ENST00000422352 FBLN2P98095 1184 aa13.33□□□□□ -0.28
LINC00658-203ENST00000422352 FGD5Q6ZNL6 1462 aa13.31□□□□□ -0.28
LINC00658-203ENST00000422352 CUX1P39880 1505 aa13.31□□□□□ -0.28
LINC00658-203ENST00000422352 TARBP1Q13395 1621 aaKnown RBP13.28□□□□□ -0.28
LINC00658-203ENST00000422352 EIF4G3O43432 1585 aaKnown RBP13.27□□□□□ -0.29
LINC00658-203ENST00000422352 CHMP7Q8WUX9 453 aaPredicted RBP13.25□□□□□ -0.29
LINC00658-203ENST00000422352 WRNQ14191 1432 aaPredicted RBP eCLIP13.22□□□□□ -0.29
LINC00658-203ENST00000422352 GRIN2BQ13224 1484 aa13.2□□□□□ -0.3
LINC00658-203ENST00000422352 SNAPC4Q5SXM2 1469 aa13.2□□□□□ -0.3
LINC00658-203ENST00000422352 GAPVD1Q14C86 1478 aa13.18□□□□□ -0.3
LINC00658-203ENST00000422352 ABCA10Q8WWZ4 1543 aa13.18□□□□□ -0.3
LINC00658-203ENST00000422352 WDR97A6NE52 1622 aa13.16□□□□□ -0.3
LINC00658-203ENST00000422352 MAGI1Q96QZ7 1491 aaPredicted RBP13.16□□□□□ -0.3
LINC00658-203ENST00000422352 CYB5RLQ6IPT4 315 aa13.14□□□□□ -0.31
LINC00658-203ENST00000422352 SYNJ2O15056 1496 aa13.12□□□□□ -0.31
LINC00658-203ENST00000422352 ARHGEF11O15085 1522 aa13.12□□□□□ -0.31
LINC00658-203ENST00000422352 TOP2BQ02880 1626 aa13.11□□□□□ -0.31
LINC00658-203ENST00000422352 SYNJ1O43426 1573 aa13.11□□□□□ -0.31
LINC00658-203ENST00000422352 RIMBP3CA6NJZ7 1639 aa13.07□□□□□ -0.32
LINC00658-203ENST00000422352 RIMBP3BA6NNM3 1639 aa13.07□□□□□ -0.32
LINC00658-203ENST00000422352 RIMBP3Q9UFD9 1639 aa13.07□□□□□ -0.32
LINC00658-203ENST00000422352 CHD1O14646 1710 aa13.07□□□□□ -0.32
LINC00658-203ENST00000422352 BIVM-ERCC5R4GMW8 1640 aa13.06□□□□□ -0.32
LINC00658-203ENST00000422352 ABCA5Q8WWZ7 1642 aa13.05□□□□□ -0.32
LINC00658-203ENST00000422352 FHAD1B1AJZ9 1412 aa13.04□□□□□ -0.32
LINC00658-203ENST00000422352 GRIN2AQ12879 1464 aa13.01□□□□□ -0.33
LINC00658-203ENST00000422352 CLASP1Q7Z460 1538 aa13.01□□□□□ -0.33
LINC00658-203ENST00000422352 ARAP1Q96P48 1450 aa13□□□□□ -0.33
LINC00658-203ENST00000422352 PBRM1Q86U86 1689 aa12.99□□□□□ -0.33
LINC00658-203ENST00000422352 ERICH3Q5RHP9 1530 aa12.99□□□□□ -0.33
LINC00658-203ENST00000422352 KIF27Q86VH2 1401 aa12.98□□□□□ -0.33
LINC00658-203ENST00000422352 NUP160Q12769 1436 aa12.96□□□□□ -0.33
LINC00658-203ENST00000422352 IGF1RP08069 1367 aa12.96□□□□□ -0.33
LINC00658-203ENST00000422352 ADAMTS12P58397 1594 aa12.96□□□□□ -0.33
LINC00658-203ENST00000422352 TRHP20396 242 aaPredicted RBP12.96□□□□□ -0.33
LINC00658-203ENST00000422352 JPH4Q96JJ6 628 aa12.93□□□□□ -0.34
LINC00658-203ENST00000422352 CEP170Q5SW79 1584 aa12.9□□□□□ -0.35
LINC00658-203ENST00000422352 CARMIL1Q5VZK9 1371 aa12.89□□□□□ -0.35
LINC00658-203ENST00000422352 PRG4Q92954 1404 aaPredicted RBP12.88□□□□□ -0.35
LINC00658-203ENST00000422352 ERCC6L2Q5T890 1561 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms