RNA–Protein interactions for RNA: ENST00000422045.1

AC008440.3-201, humanhuman

TSL 4 BASIC

Gene AC008440.3, Length 555 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008440.3-201ENST00000422045 NISCHQ9Y2I1 1504 aa26.14■■□□□ 1.77
AC008440.3-201ENST00000422045 CCDC180Q9P1Z9 1646 aa23.25■■□□□ 1.31
AC008440.3-201ENST00000422045 ABCC9O60706 1549 aa22.77■■□□□ 1.24
AC008440.3-201ENST00000422045 DCAF8L2P0C7V8 631 aa22.03■■□□□ 1.12
AC008440.3-201ENST00000422045 RB1CC1Q8TDY2 1594 aa21.95■■□□□ 1.11
AC008440.3-201ENST00000422045 NACADO15069 1562 aa21.92■■□□□ 1.1
AC008440.3-201ENST00000422045 MYO15BQ96JP2 1530 aa21.75■■□□□ 1.07
AC008440.3-201ENST00000422045 ZCCHC6Q5VYS8 1495 aaKnown RBP21.72■■□□□ 1.07
AC008440.3-201ENST00000422045 DCAF1Q9Y4B6 1507 aa21.64■■□□□ 1.05
AC008440.3-201ENST00000422045 PABPN1Q86U42 306 aaKnown RBP eCLIP21.32■■□□□ 1
AC008440.3-201ENST00000422045 UNC13AQ9UPW8 1703 aa21.31■■□□□ 1
AC008440.3-201ENST00000422045 SCRIBQ14160 1630 aa21.18■□□□□ 0.98
AC008440.3-201ENST00000422045 BICRAQ9NZM4 1560 aa21.14■□□□□ 0.98
AC008440.3-201ENST00000422045 SHROOM4Q9ULL8 1493 aa21.07■□□□□ 0.96
AC008440.3-201ENST00000422045 DNAJC5BQ9UF47 199 aa20.87■□□□□ 0.93
AC008440.3-201ENST00000422045 EIF4G1Q04637 1599 aaKnown RBP20.66■□□□□ 0.9
AC008440.3-201ENST00000422045 CC2D2AQ9P2K1 1620 aa20.58■□□□□ 0.89
AC008440.3-201ENST00000422045 CECR2Q9BXF3 1484 aa20.5■□□□□ 0.87
AC008440.3-201ENST00000422045 BAZ1AQ9NRL2 1556 aaPredicted RBP20.29■□□□□ 0.84
AC008440.3-201ENST00000422045 SMARCA4P51532 1647 aa20.26■□□□□ 0.83
AC008440.3-201ENST00000422045 SMARCA2P51531 1590 aa20.22■□□□□ 0.83
AC008440.3-201ENST00000422045 NCAPD3P42695 1498 aa20.2■□□□□ 0.82
AC008440.3-201ENST00000422045 ATAD2BQ9ULI0 1458 aa20.18■□□□□ 0.82
AC008440.3-201ENST00000422045 MROH2BQ7Z745 1585 aa20.09■□□□□ 0.81
AC008440.3-201ENST00000422045 HMGXB3Q12766 1538 aa20.07■□□□□ 0.8
AC008440.3-201ENST00000422045 BAZ1BQ9UIG0 1483 aaKnown RBP20.06■□□□□ 0.8
AC008440.3-201ENST00000422045 PEG3Q9GZU2 1588 aa20.06■□□□□ 0.8
AC008440.3-201ENST00000422045 RSF1Q96T23 1441 aaPredicted RBP19.89■□□□□ 0.77
AC008440.3-201ENST00000422045 WIZO95785 1651 aa19.88■□□□□ 0.77
AC008440.3-201ENST00000422045 ERCC6Q03468 1493 aa19.73■□□□□ 0.75
AC008440.3-201ENST00000422045 TOP2AP11388 1531 aaKnown RBP19.71■□□□□ 0.75
AC008440.3-201ENST00000422045 LAMC3Q9Y6N6 1575 aa19.69■□□□□ 0.74
AC008440.3-201ENST00000422045 CADPSQ9ULU8 1353 aa19.65■□□□□ 0.74
AC008440.3-201ENST00000422045 NESP48681 1621 aa19.65■□□□□ 0.74
AC008440.3-201ENST00000422045 PDS5BQ9NTI5 1447 aa19.63■□□□□ 0.73
AC008440.3-201ENST00000422045 CUX2O14529 1486 aa19.49■□□□□ 0.71
AC008440.3-201ENST00000422045 SUPT5HO00267 1087 aaKnown RBP19.49■□□□□ 0.71
AC008440.3-201ENST00000422045 CFTRP13569 1480 aa19.48■□□□□ 0.71
AC008440.3-201ENST00000422045 CCDC88BA6NC98 1476 aa19.48■□□□□ 0.71
AC008440.3-201ENST00000422045 KIF21AQ7Z4S6 1674 aa19.42■□□□□ 0.7
AC008440.3-201ENST00000422045 FANCD2Q9BXW9 1451 aa19.4■□□□□ 0.7
AC008440.3-201ENST00000422045 CEP164Q9UPV0 1460 aa19.4■□□□□ 0.7
AC008440.3-201ENST00000422045 MRC2Q9UBG0 1479 aa19.35■□□□□ 0.69
AC008440.3-201ENST00000422045 THOC2Q8NI27 1593 aaKnown RBP19.33■□□□□ 0.69
AC008440.3-201ENST00000422045 PRDM2Q13029 1718 aa19.31■□□□□ 0.68
AC008440.3-201ENST00000422045 WDR62O43379 1518 aa19.24■□□□□ 0.67
AC008440.3-201ENST00000422045 ABCC8Q09428 1581 aa19.18■□□□□ 0.66
AC008440.3-201ENST00000422045 URB2Q14146 1524 aaKnown RBP19.13■□□□□ 0.65
AC008440.3-201ENST00000422045 TOPBP1Q92547 1522 aa19.05■□□□□ 0.64
AC008440.3-201ENST00000422045 DNMBPQ6XZF7 1577 aa19.04■□□□□ 0.64
AC008440.3-201ENST00000422045 IFT140Q96RY7 1462 aa19■□□□□ 0.63
AC008440.3-201ENST00000422045 DNAJC5Q9H3Z4 198 aa18.96■□□□□ 0.63
AC008440.3-201ENST00000422045 SOGA1O94964 1423 aa18.89■□□□□ 0.61
AC008440.3-201ENST00000422045 POLA1P09884 1462 aaPredicted RBP18.88■□□□□ 0.61
AC008440.3-201ENST00000422045 CUX1P39880 1505 aa18.85■□□□□ 0.61
AC008440.3-201ENST00000422045 FGD5Q6ZNL6 1462 aa18.84■□□□□ 0.61
AC008440.3-201ENST00000422045 WRNQ14191 1432 aaPredicted RBP eCLIP18.82■□□□□ 0.6
AC008440.3-201ENST00000422045 ZNF608Q9ULD9 1512 aaPredicted RBP18.81■□□□□ 0.6
AC008440.3-201ENST00000422045 TARBP1Q13395 1621 aaKnown RBP18.8■□□□□ 0.6
AC008440.3-201ENST00000422045 OSCARQ8IYS5 282 aa18.79■□□□□ 0.6
AC008440.3-201ENST00000422045 RAD54L2Q9Y4B4 1467 aa18.78■□□□□ 0.6
AC008440.3-201ENST00000422045 AQRO60306 1485 aaKnown RBP eCLIP18.76■□□□□ 0.59
AC008440.3-201ENST00000422045 WDR97A6NE52 1622 aa18.75■□□□□ 0.59
AC008440.3-201ENST00000422045 EIF4G3O43432 1585 aaKnown RBP18.74■□□□□ 0.59
AC008440.3-201ENST00000422045 TDRD9Q8NDG6 1382 aaKnown RBP18.74■□□□□ 0.59
AC008440.3-201ENST00000422045 TOP2BQ02880 1626 aa18.73■□□□□ 0.59
AC008440.3-201ENST00000422045 BIVM-ERCC5R4GMW8 1640 aa18.7■□□□□ 0.58
AC008440.3-201ENST00000422045 FBLN2P98095 1184 aa18.68■□□□□ 0.58
AC008440.3-201ENST00000422045 ABCA10Q8WWZ4 1543 aa18.67■□□□□ 0.58
AC008440.3-201ENST00000422045 GRIN2BQ13224 1484 aa18.65■□□□□ 0.58
AC008440.3-201ENST00000422045 SYNJ1O43426 1573 aa18.65■□□□□ 0.58
AC008440.3-201ENST00000422045 GAPVD1Q14C86 1478 aa18.65■□□□□ 0.58
AC008440.3-201ENST00000422045 CHMP7Q8WUX9 453 aaPredicted RBP18.64■□□□□ 0.57
AC008440.3-201ENST00000422045 MAGI1Q96QZ7 1491 aaPredicted RBP18.6■□□□□ 0.57
AC008440.3-201ENST00000422045 SNAPC4Q5SXM2 1469 aa18.58■□□□□ 0.56
AC008440.3-201ENST00000422045 PBRM1Q86U86 1689 aa18.54■□□□□ 0.56
AC008440.3-201ENST00000422045 ABCA5Q8WWZ7 1642 aa18.53■□□□□ 0.56
AC008440.3-201ENST00000422045 SYNJ2O15056 1496 aa18.52■□□□□ 0.56
AC008440.3-201ENST00000422045 CHD1O14646 1710 aa18.52■□□□□ 0.55
AC008440.3-201ENST00000422045 KIF27Q86VH2 1401 aa18.48■□□□□ 0.55
AC008440.3-201ENST00000422045 ERICH3Q5RHP9 1530 aa18.47■□□□□ 0.55
AC008440.3-201ENST00000422045 TRIM41Q8WV44 630 aa18.46■□□□□ 0.55
AC008440.3-201ENST00000422045 FHAD1B1AJZ9 1412 aa18.44■□□□□ 0.54
AC008440.3-201ENST00000422045 ADAMTS12P58397 1594 aa18.38■□□□□ 0.53
AC008440.3-201ENST00000422045 GRIN2AQ12879 1464 aa18.37■□□□□ 0.53
AC008440.3-201ENST00000422045 IGF1RP08069 1367 aa18.34■□□□□ 0.53
AC008440.3-201ENST00000422045 ARHGEF11O15085 1522 aa18.33■□□□□ 0.52
AC008440.3-201ENST00000422045 RIMBP3CA6NJZ7 1639 aa18.31■□□□□ 0.52
AC008440.3-201ENST00000422045 RIMBP3BA6NNM3 1639 aa18.31■□□□□ 0.52
AC008440.3-201ENST00000422045 RIMBP3Q9UFD9 1639 aa18.31■□□□□ 0.52
AC008440.3-201ENST00000422045 CLASP1Q7Z460 1538 aa18.3■□□□□ 0.52
AC008440.3-201ENST00000422045 CUL7Q14999 1698 aa18.3■□□□□ 0.52
AC008440.3-201ENST00000422045 CARMIL1Q5VZK9 1371 aa18.28■□□□□ 0.52
AC008440.3-201ENST00000422045 NUP160Q12769 1436 aa18.27■□□□□ 0.52
AC008440.3-201ENST00000422045 CYB5RLQ6IPT4 315 aa18.27■□□□□ 0.52
AC008440.3-201ENST00000422045 CEP170Q5SW79 1584 aa18.22■□□□□ 0.51
AC008440.3-201ENST00000422045 JPH4Q96JJ6 628 aa18.21■□□□□ 0.51
AC008440.3-201ENST00000422045 RAPGEF2Q9Y4G8 1499 aa18.15■□□□□ 0.5
AC008440.3-201ENST00000422045 KIAA0586Q9BVV6 1533 aa18.15■□□□□ 0.5
AC008440.3-201ENST00000422045 ARAP1Q96P48 1450 aa18.14■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms