RNA–Protein interactions for RNA: ENST00000421928.1

RPL29P28-201, Transcript of ribosomal protein L29 pseudogene 28, humanhuman

BASIC

Gene RPL29P28, Length 472 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL29P28-201ENST00000421928 NISCHQ9Y2I1 1504 aa22.21■■□□□ 1.15
RPL29P28-201ENST00000421928 CCDC180Q9P1Z9 1646 aa19.74■□□□□ 0.75
RPL29P28-201ENST00000421928 ABCC9O60706 1549 aa19.13■□□□□ 0.65
RPL29P28-201ENST00000421928 DCAF8L2P0C7V8 631 aa18.7■□□□□ 0.58
RPL29P28-201ENST00000421928 ZCCHC6Q5VYS8 1495 aaKnown RBP18.52■□□□□ 0.56
RPL29P28-201ENST00000421928 RB1CC1Q8TDY2 1594 aa18.51■□□□□ 0.55
RPL29P28-201ENST00000421928 NACADO15069 1562 aa18.49■□□□□ 0.55
RPL29P28-201ENST00000421928 MYO15BQ96JP2 1530 aa18.35■□□□□ 0.53
RPL29P28-201ENST00000421928 DCAF1Q9Y4B6 1507 aa18.35■□□□□ 0.53
RPL29P28-201ENST00000421928 UNC13AQ9UPW8 1703 aa18.07■□□□□ 0.48
RPL29P28-201ENST00000421928 SCRIBQ14160 1630 aa18.06■□□□□ 0.48
RPL29P28-201ENST00000421928 PABPN1Q86U42 306 aaKnown RBP eCLIP17.89■□□□□ 0.45
RPL29P28-201ENST00000421928 BICRAQ9NZM4 1560 aa17.79■□□□□ 0.44
RPL29P28-201ENST00000421928 SHROOM4Q9ULL8 1493 aa17.78■□□□□ 0.44
RPL29P28-201ENST00000421928 EIF4G1Q04637 1599 aaKnown RBP17.4■□□□□ 0.38
RPL29P28-201ENST00000421928 CC2D2AQ9P2K1 1620 aa17.3■□□□□ 0.36
RPL29P28-201ENST00000421928 BAZ1AQ9NRL2 1556 aaPredicted RBP17.27■□□□□ 0.35
RPL29P28-201ENST00000421928 CECR2Q9BXF3 1484 aa17.24■□□□□ 0.35
RPL29P28-201ENST00000421928 SMARCA4P51532 1647 aa17.24■□□□□ 0.35
RPL29P28-201ENST00000421928 DNAJC5BQ9UF47 199 aa17.22■□□□□ 0.35
RPL29P28-201ENST00000421928 SMARCA2P51531 1590 aa17.11■□□□□ 0.33
RPL29P28-201ENST00000421928 MROH2BQ7Z745 1585 aa17.11■□□□□ 0.33
RPL29P28-201ENST00000421928 ATAD2BQ9ULI0 1458 aa17.04■□□□□ 0.32
RPL29P28-201ENST00000421928 BAZ1BQ9UIG0 1483 aaKnown RBP17.01■□□□□ 0.31
RPL29P28-201ENST00000421928 WIZO95785 1651 aa17.01■□□□□ 0.31
RPL29P28-201ENST00000421928 PEG3Q9GZU2 1588 aa16.98■□□□□ 0.31
RPL29P28-201ENST00000421928 NCAPD3P42695 1498 aa16.98■□□□□ 0.31
RPL29P28-201ENST00000421928 HMGXB3Q12766 1538 aa16.97■□□□□ 0.31
RPL29P28-201ENST00000421928 RSF1Q96T23 1441 aaPredicted RBP16.96■□□□□ 0.31
RPL29P28-201ENST00000421928 SUPT5HO00267 1087 aaKnown RBP16.86■□□□□ 0.29
RPL29P28-201ENST00000421928 TOP2AP11388 1531 aaKnown RBP16.82■□□□□ 0.28
RPL29P28-201ENST00000421928 LAMC3Q9Y6N6 1575 aa16.6■□□□□ 0.25
RPL29P28-201ENST00000421928 CCDC88BA6NC98 1476 aa16.59■□□□□ 0.25
RPL29P28-201ENST00000421928 ERCC6Q03468 1493 aa16.57■□□□□ 0.24
RPL29P28-201ENST00000421928 NESP48681 1621 aa16.55■□□□□ 0.24
RPL29P28-201ENST00000421928 CADPSQ9ULU8 1353 aa16.54■□□□□ 0.24
RPL29P28-201ENST00000421928 PDS5BQ9NTI5 1447 aa16.51■□□□□ 0.23
RPL29P28-201ENST00000421928 PRDM2Q13029 1718 aa16.5■□□□□ 0.23
RPL29P28-201ENST00000421928 CFTRP13569 1480 aa16.45■□□□□ 0.22
RPL29P28-201ENST00000421928 KIF21AQ7Z4S6 1674 aa16.45■□□□□ 0.22
RPL29P28-201ENST00000421928 CEP164Q9UPV0 1460 aa16.4■□□□□ 0.22
RPL29P28-201ENST00000421928 FANCD2Q9BXW9 1451 aa16.39■□□□□ 0.21
RPL29P28-201ENST00000421928 MRC2Q9UBG0 1479 aa16.29■□□□□ 0.2
RPL29P28-201ENST00000421928 THOC2Q8NI27 1593 aaKnown RBP16.27■□□□□ 0.2
RPL29P28-201ENST00000421928 CUX2O14529 1486 aa16.22■□□□□ 0.19
RPL29P28-201ENST00000421928 ABCC8Q09428 1581 aa16.21■□□□□ 0.18
RPL29P28-201ENST00000421928 WDR62O43379 1518 aa16.2■□□□□ 0.18
RPL29P28-201ENST00000421928 DNMBPQ6XZF7 1577 aa16.16■□□□□ 0.18
RPL29P28-201ENST00000421928 URB2Q14146 1524 aaKnown RBP16.15■□□□□ 0.18
RPL29P28-201ENST00000421928 AEBP2Q6ZN18 517 aaPredicted RBP16.14■□□□□ 0.17
RPL29P28-201ENST00000421928 TOPBP1Q92547 1522 aa16.13■□□□□ 0.17
RPL29P28-201ENST00000421928 WRNQ14191 1432 aaPredicted RBP eCLIP16.08■□□□□ 0.16
RPL29P28-201ENST00000421928 CUX1P39880 1505 aa16.05■□□□□ 0.16
RPL29P28-201ENST00000421928 FGD5Q6ZNL6 1462 aa16.02■□□□□ 0.15
RPL29P28-201ENST00000421928 BIVM-ERCC5R4GMW8 1640 aa16.01■□□□□ 0.15
RPL29P28-201ENST00000421928 IFT140Q96RY7 1462 aa16.01■□□□□ 0.15
RPL29P28-201ENST00000421928 TOP2BQ02880 1626 aa16.01■□□□□ 0.15
RPL29P28-201ENST00000421928 SYNJ1O43426 1573 aa16■□□□□ 0.15
RPL29P28-201ENST00000421928 POLA1P09884 1462 aaPredicted RBP15.99■□□□□ 0.15
RPL29P28-201ENST00000421928 SOGA1O94964 1423 aa15.98■□□□□ 0.15
RPL29P28-201ENST00000421928 RAD54L2Q9Y4B4 1467 aa15.93■□□□□ 0.14
RPL29P28-201ENST00000421928 TRIM41Q8WV44 630 aa15.92■□□□□ 0.14
RPL29P28-201ENST00000421928 TARBP1Q13395 1621 aaKnown RBP15.9■□□□□ 0.14
RPL29P28-201ENST00000421928 EIF4G3O43432 1585 aaKnown RBP15.88■□□□□ 0.13
RPL29P28-201ENST00000421928 WDR97A6NE52 1622 aa15.86■□□□□ 0.13
RPL29P28-201ENST00000421928 ZNF608Q9ULD9 1512 aaPredicted RBP15.86■□□□□ 0.13
RPL29P28-201ENST00000421928 TDRD9Q8NDG6 1382 aaKnown RBP15.84■□□□□ 0.13
RPL29P28-201ENST00000421928 ABCA10Q8WWZ4 1543 aa15.84■□□□□ 0.13
RPL29P28-201ENST00000421928 AQRO60306 1485 aaKnown RBP eCLIP15.83■□□□□ 0.12
RPL29P28-201ENST00000421928 PBRM1Q86U86 1689 aa15.82■□□□□ 0.12
RPL29P28-201ENST00000421928 GAPVD1Q14C86 1478 aa15.8■□□□□ 0.12
RPL29P28-201ENST00000421928 ABCA5Q8WWZ7 1642 aa15.77■□□□□ 0.12
RPL29P28-201ENST00000421928 GRIN2BQ13224 1484 aa15.77■□□□□ 0.11
RPL29P28-201ENST00000421928 KIF27Q86VH2 1401 aa15.77■□□□□ 0.11
RPL29P28-201ENST00000421928 FBLN2P98095 1184 aa15.75■□□□□ 0.11
RPL29P28-201ENST00000421928 SNAPC4Q5SXM2 1469 aa15.72■□□□□ 0.11
RPL29P28-201ENST00000421928 CHIC1Q5VXU3 224 aa15.71■□□□□ 0.11
RPL29P28-201ENST00000421928 MAGI1Q96QZ7 1491 aaPredicted RBP15.71■□□□□ 0.1
RPL29P28-201ENST00000421928 CHMP7Q8WUX9 453 aaPredicted RBP15.7■□□□□ 0.1
RPL29P28-201ENST00000421928 CHD1O14646 1710 aa15.69■□□□□ 0.1
RPL29P28-201ENST00000421928 ERICH3Q5RHP9 1530 aa15.68■□□□□ 0.1
RPL29P28-201ENST00000421928 CUL7Q14999 1698 aa15.65■□□□□ 0.1
RPL29P28-201ENST00000421928 ADAMTS12P58397 1594 aa15.63■□□□□ 0.09
RPL29P28-201ENST00000421928 SYNJ2O15056 1496 aa15.63■□□□□ 0.09
RPL29P28-201ENST00000421928 OSCARQ8IYS5 282 aa15.62■□□□□ 0.09
RPL29P28-201ENST00000421928 FHAD1B1AJZ9 1412 aa15.61■□□□□ 0.09
RPL29P28-201ENST00000421928 FAM9AQ8IZU1 332 aaPredicted RBP15.6■□□□□ 0.09
RPL29P28-201ENST00000421928 EEA1Q15075 1411 aa15.59■□□□□ 0.09
RPL29P28-201ENST00000421928 RUSC2Q8N2Y8 1516 aa15.57■□□□□ 0.08
RPL29P28-201ENST00000421928 GRIN2AQ12879 1464 aa15.55■□□□□ 0.08
RPL29P28-201ENST00000421928 IGF1RP08069 1367 aa15.55■□□□□ 0.08
RPL29P28-201ENST00000421928 CARMIL1Q5VZK9 1371 aa15.55■□□□□ 0.08
RPL29P28-201ENST00000421928 CSRNP3Q8WYN3 585 aa15.52■□□□□ 0.08
RPL29P28-201ENST00000421928 RAPGEF2Q9Y4G8 1499 aa15.49■□□□□ 0.07
RPL29P28-201ENST00000421928 CEP170Q5SW79 1584 aa15.45■□□□□ 0.06
RPL29P28-201ENST00000421928 EHMT2Q96KQ7 1210 aa15.44■□□□□ 0.06
RPL29P28-201ENST00000421928 DNAJC5Q9H3Z4 198 aa15.44■□□□□ 0.06
RPL29P28-201ENST00000421928 CTTNBP2Q8WZ74 1663 aa15.41■□□□□ 0.06
RPL29P28-201ENST00000421928 CLASP1Q7Z460 1538 aa15.41■□□□□ 0.06
RPL29P28-201ENST00000421928 NUP160Q12769 1436 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms