RNA–Protein interactions for RNA: ENST00000421689.6

CAST-208, Transcript of calpastatin, humanhuman

TSL 5

Gene CAST, Length 913 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-208ENST00000421689 NISCHQ9Y2I1 1504 aa27.96■■■□□ 2.07
CAST-208ENST00000421689 CCDC180Q9P1Z9 1646 aa24.72■■□□□ 1.55
CAST-208ENST00000421689 ABCC9O60706 1549 aa23.8■■□□□ 1.4
CAST-208ENST00000421689 ZCCHC6Q5VYS8 1495 aaKnown RBP23.36■■□□□ 1.33
CAST-208ENST00000421689 DCAF8L2P0C7V8 631 aa23.22■■□□□ 1.31
CAST-208ENST00000421689 DCAF1Q9Y4B6 1507 aa23.16■■□□□ 1.3
CAST-208ENST00000421689 NACADO15069 1562 aa23.14■■□□□ 1.3
CAST-208ENST00000421689 MYO15BQ96JP2 1530 aa23.13■■□□□ 1.29
CAST-208ENST00000421689 RB1CC1Q8TDY2 1594 aa23.09■■□□□ 1.29
CAST-208ENST00000421689 UNC13AQ9UPW8 1703 aa22.59■■□□□ 1.21
CAST-208ENST00000421689 SCRIBQ14160 1630 aa22.56■■□□□ 1.2
CAST-208ENST00000421689 BICRAQ9NZM4 1560 aa22.35■■□□□ 1.17
CAST-208ENST00000421689 PABPN1Q86U42 306 aaKnown RBP eCLIP22.3■■□□□ 1.16
CAST-208ENST00000421689 SHROOM4Q9ULL8 1493 aa22.28■■□□□ 1.16
CAST-208ENST00000421689 EIF4G1Q04637 1599 aaKnown RBP21.74■■□□□ 1.07
CAST-208ENST00000421689 CECR2Q9BXF3 1484 aa21.72■■□□□ 1.07
CAST-208ENST00000421689 BAZ1AQ9NRL2 1556 aaPredicted RBP21.65■■□□□ 1.06
CAST-208ENST00000421689 SMARCA4P51532 1647 aa21.62■■□□□ 1.05
CAST-208ENST00000421689 CC2D2AQ9P2K1 1620 aa21.57■■□□□ 1.04
CAST-208ENST00000421689 MROH2BQ7Z745 1585 aa21.54■■□□□ 1.04
CAST-208ENST00000421689 DNAJC5BQ9UF47 199 aa21.51■■□□□ 1.03
CAST-208ENST00000421689 RSF1Q96T23 1441 aaPredicted RBP21.42■■□□□ 1.02
CAST-208ENST00000421689 SMARCA2P51531 1590 aa21.41■■□□□ 1.02
CAST-208ENST00000421689 PEG3Q9GZU2 1588 aa21.4■■□□□ 1.02
CAST-208ENST00000421689 ATAD2BQ9ULI0 1458 aa21.4■■□□□ 1.02
CAST-208ENST00000421689 WIZO95785 1651 aa21.34■■□□□ 1.01
CAST-208ENST00000421689 NCAPD3P42695 1498 aa21.34■■□□□ 1.01
CAST-208ENST00000421689 HMGXB3Q12766 1538 aa21.28■■□□□ 1
CAST-208ENST00000421689 BAZ1BQ9UIG0 1483 aaKnown RBP21.26■□□□□ 0.99
CAST-208ENST00000421689 SUPT5HO00267 1087 aaKnown RBP21.16■□□□□ 0.98
CAST-208ENST00000421689 TOP2AP11388 1531 aaKnown RBP21.14■□□□□ 0.97
CAST-208ENST00000421689 CCDC88BA6NC98 1476 aa20.88■□□□□ 0.93
CAST-208ENST00000421689 AEBP2Q6ZN18 517 aaPredicted RBP20.86■□□□□ 0.93
CAST-208ENST00000421689 LAMC3Q9Y6N6 1575 aa20.74■□□□□ 0.91
CAST-208ENST00000421689 CADPSQ9ULU8 1353 aa20.73■□□□□ 0.91
CAST-208ENST00000421689 NESP48681 1621 aa20.7■□□□□ 0.9
CAST-208ENST00000421689 CFTRP13569 1480 aa20.69■□□□□ 0.9
CAST-208ENST00000421689 PRDM2Q13029 1718 aa20.61■□□□□ 0.89
CAST-208ENST00000421689 PDS5BQ9NTI5 1447 aa20.58■□□□□ 0.88
CAST-208ENST00000421689 KIF21AQ7Z4S6 1674 aa20.51■□□□□ 0.87
CAST-208ENST00000421689 ERCC6Q03468 1493 aa20.5■□□□□ 0.87
CAST-208ENST00000421689 FANCD2Q9BXW9 1451 aa20.5■□□□□ 0.87
CAST-208ENST00000421689 CEP164Q9UPV0 1460 aa20.44■□□□□ 0.86
CAST-208ENST00000421689 MRC2Q9UBG0 1479 aa20.34■□□□□ 0.85
CAST-208ENST00000421689 THOC2Q8NI27 1593 aaKnown RBP20.33■□□□□ 0.84
CAST-208ENST00000421689 ABCC8Q09428 1581 aa20.26■□□□□ 0.83
CAST-208ENST00000421689 WDR62O43379 1518 aa20.26■□□□□ 0.83
CAST-208ENST00000421689 URB2Q14146 1524 aaKnown RBP20.26■□□□□ 0.83
CAST-208ENST00000421689 DNMBPQ6XZF7 1577 aa20.23■□□□□ 0.83
CAST-208ENST00000421689 TOPBP1Q92547 1522 aa20.22■□□□□ 0.83
CAST-208ENST00000421689 WRNQ14191 1432 aaPredicted RBP eCLIP20.2■□□□□ 0.82
CAST-208ENST00000421689 CUX1P39880 1505 aa20.19■□□□□ 0.82
CAST-208ENST00000421689 CUX2O14529 1486 aa20.16■□□□□ 0.82
CAST-208ENST00000421689 BIVM-ERCC5R4GMW8 1640 aa20.13■□□□□ 0.81
CAST-208ENST00000421689 TOP2BQ02880 1626 aa20.13■□□□□ 0.81
CAST-208ENST00000421689 SYNJ1O43426 1573 aa20.12■□□□□ 0.81
CAST-208ENST00000421689 FGD5Q6ZNL6 1462 aa20.07■□□□□ 0.8
CAST-208ENST00000421689 POLA1P09884 1462 aaPredicted RBP20.05■□□□□ 0.8
CAST-208ENST00000421689 IFT140Q96RY7 1462 aa20■□□□□ 0.79
CAST-208ENST00000421689 SOGA1O94964 1423 aa20■□□□□ 0.79
CAST-208ENST00000421689 TRIM41Q8WV44 630 aa19.99■□□□□ 0.79
CAST-208ENST00000421689 TARBP1Q13395 1621 aaKnown RBP19.97■□□□□ 0.79
CAST-208ENST00000421689 RAD54L2Q9Y4B4 1467 aa19.97■□□□□ 0.79
CAST-208ENST00000421689 CHIC1Q5VXU3 224 aa19.96■□□□□ 0.79
CAST-208ENST00000421689 ABCA10Q8WWZ4 1543 aa19.9■□□□□ 0.78
CAST-208ENST00000421689 WDR97A6NE52 1622 aa19.9■□□□□ 0.78
CAST-208ENST00000421689 ZNF608Q9ULD9 1512 aaPredicted RBP19.86■□□□□ 0.77
CAST-208ENST00000421689 EIF4G3O43432 1585 aaKnown RBP19.82■□□□□ 0.76
CAST-208ENST00000421689 TDRD9Q8NDG6 1382 aaKnown RBP19.82■□□□□ 0.76
CAST-208ENST00000421689 AQRO60306 1485 aaKnown RBP eCLIP19.8■□□□□ 0.762e-6■■■■□ 24.3
CAST-208ENST00000421689 ABCA5Q8WWZ7 1642 aa19.79■□□□□ 0.76
CAST-208ENST00000421689 GAPVD1Q14C86 1478 aa19.77■□□□□ 0.76
CAST-208ENST00000421689 KIF27Q86VH2 1401 aa19.76■□□□□ 0.75
CAST-208ENST00000421689 PBRM1Q86U86 1689 aa19.73■□□□□ 0.75
CAST-208ENST00000421689 GRIN2BQ13224 1484 aa19.72■□□□□ 0.75
CAST-208ENST00000421689 ERICH3Q5RHP9 1530 aa19.67■□□□□ 0.74
CAST-208ENST00000421689 RUSC2Q8N2Y8 1516 aa19.67■□□□□ 0.74
CAST-208ENST00000421689 SNAPC4Q5SXM2 1469 aa19.63■□□□□ 0.73
CAST-208ENST00000421689 MAGI1Q96QZ7 1491 aaPredicted RBP19.63■□□□□ 0.73
CAST-208ENST00000421689 EEA1Q15075 1411 aa19.63■□□□□ 0.73
CAST-208ENST00000421689 IGF1RP08069 1367 aa19.62■□□□□ 0.73
CAST-208ENST00000421689 CUL7Q14999 1698 aa19.58■□□□□ 0.72
CAST-208ENST00000421689 ADAMTS12P58397 1594 aa19.57■□□□□ 0.72
CAST-208ENST00000421689 FHAD1B1AJZ9 1412 aa19.55■□□□□ 0.72
CAST-208ENST00000421689 FAM9AQ8IZU1 332 aaPredicted RBP19.55■□□□□ 0.72
CAST-208ENST00000421689 CSRNP3Q8WYN3 585 aa19.55■□□□□ 0.72
CAST-208ENST00000421689 SYNJ2O15056 1496 aa19.54■□□□□ 0.72
CAST-208ENST00000421689 CARMIL1Q5VZK9 1371 aa19.53■□□□□ 0.72
CAST-208ENST00000421689 CHD1O14646 1710 aa19.52■□□□□ 0.72
CAST-208ENST00000421689 CHMP7Q8WUX9 453 aaPredicted RBP19.52■□□□□ 0.72
CAST-208ENST00000421689 FBLN2P98095 1184 aa19.5■□□□□ 0.71
CAST-208ENST00000421689 GRIN2AQ12879 1464 aa19.47■□□□□ 0.71
CAST-208ENST00000421689 PRXQ9BXM0 1461 aa19.46■□□□□ 0.71
CAST-208ENST00000421689 RAPGEF2Q9Y4G8 1499 aa19.45■□□□□ 0.7
CAST-208ENST00000421689 OSCARQ8IYS5 282 aa19.4■□□□□ 0.7
CAST-208ENST00000421689 KIF21BO75037 1637 aa19.4■□□□□ 0.7
CAST-208ENST00000421689 NUP160Q12769 1436 aa19.35■□□□□ 0.69
CAST-208ENST00000421689 CEP170Q5SW79 1584 aa19.35■□□□□ 0.69
CAST-208ENST00000421689 GOLGA3Q08378 1498 aa19.3■□□□□ 0.68
CAST-208ENST00000421689 CLASP1Q7Z460 1538 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms