RNA–Protein interactions for RNA: ENST00000421664.1

EFEMP1-203, Transcript of EGF containing fibulin extracellular matrix protein 1, humanhuman

TSL 4

Gene EFEMP1, Length 547 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFEMP1-203ENST00000421664 NISCHQ9Y2I1 1504 aa39.77■■■■□ 3.96
EFEMP1-203ENST00000421664 CCDC180Q9P1Z9 1646 aa35.32■■■■□ 3.24
EFEMP1-203ENST00000421664 ABCC9O60706 1549 aa34.25■■■■□ 3.07
EFEMP1-203ENST00000421664 ZCCHC6Q5VYS8 1495 aaKnown RBP33.21■■■□□ 2.91
EFEMP1-203ENST00000421664 NACADO15069 1562 aa33.12■■■□□ 2.89
EFEMP1-203ENST00000421664 RB1CC1Q8TDY2 1594 aa33.09■■■□□ 2.89
EFEMP1-203ENST00000421664 MYO15BQ96JP2 1530 aa33.03■■■□□ 2.88
EFEMP1-203ENST00000421664 DCAF8L2P0C7V8 631 aa32.96■■■□□ 2.87
EFEMP1-203ENST00000421664 DCAF1Q9Y4B6 1507 aa32.96■■■□□ 2.87
EFEMP1-203ENST00000421664 UNC13AQ9UPW8 1703 aa32.36■■■□□ 2.77
EFEMP1-203ENST00000421664 SCRIBQ14160 1630 aa32.18■■■□□ 2.74
EFEMP1-203ENST00000421664 BICRAQ9NZM4 1560 aa32.11■■■□□ 2.73
EFEMP1-203ENST00000421664 PABPN1Q86U42 306 aaKnown RBP eCLIP31.99■■■□□ 2.71
EFEMP1-203ENST00000421664 SHROOM4Q9ULL8 1493 aa31.83■■■□□ 2.69
EFEMP1-203ENST00000421664 DNAJC5BQ9UF47 199 aa31.23■■■□□ 2.59
EFEMP1-203ENST00000421664 EIF4G1Q04637 1599 aaKnown RBP31.22■■■□□ 2.59
EFEMP1-203ENST00000421664 CC2D2AQ9P2K1 1620 aa31.03■■■□□ 2.56
EFEMP1-203ENST00000421664 CECR2Q9BXF3 1484 aa30.95■■■□□ 2.54
EFEMP1-203ENST00000421664 SMARCA4P51532 1647 aa30.84■■■□□ 2.53
EFEMP1-203ENST00000421664 BAZ1AQ9NRL2 1556 aaPredicted RBP30.82■■■□□ 2.52
EFEMP1-203ENST00000421664 MROH2BQ7Z745 1585 aa30.66■■■□□ 2.5
EFEMP1-203ENST00000421664 ATAD2BQ9ULI0 1458 aa30.59■■■□□ 2.49
EFEMP1-203ENST00000421664 SMARCA2P51531 1590 aa30.58■■■□□ 2.49
EFEMP1-203ENST00000421664 PEG3Q9GZU2 1588 aa30.56■■■□□ 2.48
EFEMP1-203ENST00000421664 NCAPD3P42695 1498 aa30.55■■■□□ 2.48
EFEMP1-203ENST00000421664 HMGXB3Q12766 1538 aa30.45■■■□□ 2.47
EFEMP1-203ENST00000421664 RSF1Q96T23 1441 aaPredicted RBP30.37■■■□□ 2.45
EFEMP1-203ENST00000421664 BAZ1BQ9UIG0 1483 aaKnown RBP30.34■■■□□ 2.45
EFEMP1-203ENST00000421664 WIZO95785 1651 aa30.32■■■□□ 2.44
EFEMP1-203ENST00000421664 TOP2AP11388 1531 aaKnown RBP30.05■■■□□ 2.4
EFEMP1-203ENST00000421664 NESP48681 1621 aa29.72■■■□□ 2.35
EFEMP1-203ENST00000421664 LAMC3Q9Y6N6 1575 aa29.72■■■□□ 2.35
EFEMP1-203ENST00000421664 CCDC88BA6NC98 1476 aa29.65■■■□□ 2.34
EFEMP1-203ENST00000421664 SUPT5HO00267 1087 aaKnown RBP29.64■■■□□ 2.34
EFEMP1-203ENST00000421664 CADPSQ9ULU8 1353 aa29.64■■■□□ 2.33
EFEMP1-203ENST00000421664 CFTRP13569 1480 aa29.55■■■□□ 2.32
EFEMP1-203ENST00000421664 ERCC6Q03468 1493 aa29.49■■■□□ 2.31
EFEMP1-203ENST00000421664 PDS5BQ9NTI5 1447 aa29.46■■■□□ 2.31
EFEMP1-203ENST00000421664 KIF21AQ7Z4S6 1674 aa29.4■■■□□ 2.3
EFEMP1-203ENST00000421664 PRDM2Q13029 1718 aa29.36■■■□□ 2.29
EFEMP1-203ENST00000421664 FANCD2Q9BXW9 1451 aa29.31■■■□□ 2.28
EFEMP1-203ENST00000421664 THOC2Q8NI27 1593 aaKnown RBP29.29■■■□□ 2.28
EFEMP1-203ENST00000421664 CEP164Q9UPV0 1460 aa29.26■■■□□ 2.27
EFEMP1-203ENST00000421664 MRC2Q9UBG0 1479 aa29.18■■■□□ 2.26
EFEMP1-203ENST00000421664 CUX2O14529 1486 aa29.17■■■□□ 2.26
EFEMP1-203ENST00000421664 WDR62O43379 1518 aa29.11■■■□□ 2.25
EFEMP1-203ENST00000421664 DNAJC5Q9H3Z4 198 aa29.06■■■□□ 2.24
EFEMP1-203ENST00000421664 URB2Q14146 1524 aaKnown RBP29.03■■■□□ 2.24
EFEMP1-203ENST00000421664 TOPBP1Q92547 1522 aa28.88■■■□□ 2.21
EFEMP1-203ENST00000421664 ABCC8Q09428 1581 aa28.88■■■□□ 2.21
EFEMP1-203ENST00000421664 DNMBPQ6XZF7 1577 aa28.88■■■□□ 2.21
EFEMP1-203ENST00000421664 CUX1P39880 1505 aa28.75■■■□□ 2.19
EFEMP1-203ENST00000421664 POLA1P09884 1462 aaPredicted RBP28.66■■■□□ 2.18
EFEMP1-203ENST00000421664 IFT140Q96RY7 1462 aa28.64■■■□□ 2.17
EFEMP1-203ENST00000421664 WRNQ14191 1432 aaPredicted RBP eCLIP28.61■■■□□ 2.17
EFEMP1-203ENST00000421664 FGD5Q6ZNL6 1462 aa28.6■■■□□ 2.17
EFEMP1-203ENST00000421664 TARBP1Q13395 1621 aaKnown RBP28.58■■■□□ 2.17
EFEMP1-203ENST00000421664 BIVM-ERCC5R4GMW8 1640 aa28.58■■■□□ 2.17
EFEMP1-203ENST00000421664 SYNJ1O43426 1573 aa28.57■■■□□ 2.16
EFEMP1-203ENST00000421664 TOP2BQ02880 1626 aa28.57■■■□□ 2.16
EFEMP1-203ENST00000421664 RAD54L2Q9Y4B4 1467 aa28.49■■■□□ 2.15
EFEMP1-203ENST00000421664 SOGA1O94964 1423 aa28.49■■■□□ 2.15
EFEMP1-203ENST00000421664 ZNF608Q9ULD9 1512 aaPredicted RBP28.48■■■□□ 2.15
EFEMP1-203ENST00000421664 WDR97A6NE52 1622 aa28.42■■■□□ 2.14
EFEMP1-203ENST00000421664 EIF4G3O43432 1585 aaKnown RBP28.41■■■□□ 2.14
EFEMP1-203ENST00000421664 ABCA10Q8WWZ4 1543 aa28.35■■■□□ 2.13
EFEMP1-203ENST00000421664 AQRO60306 1485 aaKnown RBP eCLIP28.33■■■□□ 2.13
EFEMP1-203ENST00000421664 TDRD9Q8NDG6 1382 aaKnown RBP28.29■■■□□ 2.12
EFEMP1-203ENST00000421664 ABCA5Q8WWZ7 1642 aa28.25■■■□□ 2.11
EFEMP1-203ENST00000421664 GAPVD1Q14C86 1478 aa28.19■■■□□ 2.1
EFEMP1-203ENST00000421664 GRIN2BQ13224 1484 aa28.16■■■□□ 2.1
EFEMP1-203ENST00000421664 PBRM1Q86U86 1689 aa28.15■■■□□ 2.1
EFEMP1-203ENST00000421664 SNAPC4Q5SXM2 1469 aa28.1■■■□□ 2.09
EFEMP1-203ENST00000421664 MAGI1Q96QZ7 1491 aaPredicted RBP28.08■■■□□ 2.09
EFEMP1-203ENST00000421664 ERICH3Q5RHP9 1530 aa28.02■■■□□ 2.08
EFEMP1-203ENST00000421664 TRIM41Q8WV44 630 aa28■■■□□ 2.07
EFEMP1-203ENST00000421664 CHD1O14646 1710 aa28■■■□□ 2.07
EFEMP1-203ENST00000421664 KIF27Q86VH2 1401 aa28■■■□□ 2.07
EFEMP1-203ENST00000421664 SYNJ2O15056 1496 aa27.96■■■□□ 2.07
EFEMP1-203ENST00000421664 ADAMTS12P58397 1594 aa27.96■■■□□ 2.07
EFEMP1-203ENST00000421664 OSCARQ8IYS5 282 aa27.9■■■□□ 2.06
EFEMP1-203ENST00000421664 FHAD1B1AJZ9 1412 aa27.88■■■□□ 2.05
EFEMP1-203ENST00000421664 FBLN2P98095 1184 aa27.86■■■□□ 2.05
EFEMP1-203ENST00000421664 IGF1RP08069 1367 aa27.85■■■□□ 2.05
EFEMP1-203ENST00000421664 CHMP7Q8WUX9 453 aaPredicted RBP27.84■■■□□ 2.05
EFEMP1-203ENST00000421664 CHIC1Q5VXU3 224 aa27.83■■■□□ 2.05
EFEMP1-203ENST00000421664 GRIN2AQ12879 1464 aa27.82■■■□□ 2.04
EFEMP1-203ENST00000421664 CUL7Q14999 1698 aa27.81■■■□□ 2.04
EFEMP1-203ENST00000421664 RUSC2Q8N2Y8 1516 aa27.81■■■□□ 2.04
EFEMP1-203ENST00000421664 CLASP1Q7Z460 1538 aa27.73■■■□□ 2.03
EFEMP1-203ENST00000421664 NUP160Q12769 1436 aa27.7■■■□□ 2.03
EFEMP1-203ENST00000421664 CEP170Q5SW79 1584 aa27.69■■■□□ 2.02
EFEMP1-203ENST00000421664 CARMIL1Q5VZK9 1371 aa27.67■■■□□ 2.02
EFEMP1-203ENST00000421664 EEA1Q15075 1411 aa27.61■■■□□ 2.01
EFEMP1-203ENST00000421664 RAPGEF2Q9Y4G8 1499 aa27.56■■■□□ 2
EFEMP1-203ENST00000421664 PRXQ9BXM0 1461 aa27.55■■■□□ 2
EFEMP1-203ENST00000421664 ARHGEF11O15085 1522 aa27.53■■■□□ 2
EFEMP1-203ENST00000421664 RIMBP3CA6NJZ7 1639 aa27.51■■□□□ 1.99
EFEMP1-203ENST00000421664 RIMBP3BA6NNM3 1639 aa27.51■■□□□ 1.99
EFEMP1-203ENST00000421664 RIMBP3Q9UFD9 1639 aa27.51■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms