RNA–Protein interactions for RNA: ENST00000421523.5

HDAC8-212, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-212ENST00000421523 NISCHQ9Y2I1 1504 aa14.73□□□□□ -0.05
HDAC8-212ENST00000421523 ABCC9O60706 1549 aa14.28□□□□□ -0.12
HDAC8-212ENST00000421523 DNAJC5BQ9UF47 199 aa13.97□□□□□ -0.17
HDAC8-212ENST00000421523 CCDC180Q9P1Z9 1646 aa13.52□□□□□ -0.25
HDAC8-212ENST00000421523 DNAJC5Q9H3Z4 198 aa13.29□□□□□ -0.28
HDAC8-212ENST00000421523 RB1CC1Q8TDY2 1594 aa13.21□□□□□ -0.29
HDAC8-212ENST00000421523 PABPN1Q86U42 306 aaKnown RBP eCLIP13.18□□□□□ -0.3
HDAC8-212ENST00000421523 UNC13AQ9UPW8 1703 aa12.95□□□□□ -0.34
HDAC8-212ENST00000421523 NACADO15069 1562 aa12.92□□□□□ -0.34
HDAC8-212ENST00000421523 CECR2Q9BXF3 1484 aa12.9□□□□□ -0.34
HDAC8-212ENST00000421523 BICRAQ9NZM4 1560 aa12.86□□□□□ -0.35
HDAC8-212ENST00000421523 DCAF8L2P0C7V8 631 aa12.83□□□□□ -0.36
HDAC8-212ENST00000421523 CC2D2AQ9P2K1 1620 aa12.83□□□□□ -0.36
HDAC8-212ENST00000421523 AEBP2Q6ZN18 517 aaPredicted RBP12.77□□□□□ -0.37
HDAC8-212ENST00000421523 EIF4G1Q04637 1599 aaKnown RBP12.62□□□□□ -0.39
HDAC8-212ENST00000421523 SHROOM4Q9ULL8 1493 aa12.54□□□□□ -0.4
HDAC8-212ENST00000421523 TRIM41Q8WV44 630 aa12.54□□□□□ -0.4
HDAC8-212ENST00000421523 CUX2O14529 1486 aa12.52□□□□□ -0.41
HDAC8-212ENST00000421523 MYO15BQ96JP2 1530 aa12.46□□□□□ -0.42
HDAC8-212ENST00000421523 ERCC6Q03468 1493 aa12.38□□□□□ -0.43
HDAC8-212ENST00000421523 SCRIBQ14160 1630 aa12.37□□□□□ -0.43
HDAC8-212ENST00000421523 ZCCHC6Q5VYS8 1495 aaKnown RBP12.07□□□□□ -0.48
HDAC8-212ENST00000421523 DCAF1Q9Y4B6 1507 aa12.06□□□□□ -0.48
HDAC8-212ENST00000421523 NESP48681 1621 aa12.06□□□□□ -0.48
HDAC8-212ENST00000421523 THOC2Q8NI27 1593 aaKnown RBP12.05□□□□□ -0.48
HDAC8-212ENST00000421523 SMARCA2P51531 1590 aa11.98□□□□□ -0.49
HDAC8-212ENST00000421523 CHIC1Q5VXU3 224 aa11.94□□□□□ -0.5
HDAC8-212ENST00000421523 NCAPD3P42695 1498 aa11.93□□□□□ -0.5
HDAC8-212ENST00000421523 BAZ1AQ9NRL2 1556 aaPredicted RBP11.9□□□□□ -0.5
HDAC8-212ENST00000421523 KIF21AQ7Z4S6 1674 aa11.88□□□□□ -0.51
HDAC8-212ENST00000421523 ATAD2BQ9ULI0 1458 aa11.83□□□□□ -0.52
HDAC8-212ENST00000421523 OSCARQ8IYS5 282 aa11.82□□□□□ -0.52
HDAC8-212ENST00000421523 HMGXB3Q12766 1538 aa11.81□□□□□ -0.52
HDAC8-212ENST00000421523 RIMBP3CA6NJZ7 1639 aa11.8□□□□□ -0.52
HDAC8-212ENST00000421523 RIMBP3BA6NNM3 1639 aa11.8□□□□□ -0.52
HDAC8-212ENST00000421523 RIMBP3Q9UFD9 1639 aa11.8□□□□□ -0.52
HDAC8-212ENST00000421523 LAMC3Q9Y6N6 1575 aa11.79□□□□□ -0.52
HDAC8-212ENST00000421523 TRHP20396 242 aaPredicted RBP11.78□□□□□ -0.52
HDAC8-212ENST00000421523 PDS5BQ9NTI5 1447 aa11.76□□□□□ -0.53
HDAC8-212ENST00000421523 MRC2Q9UBG0 1479 aa11.73□□□□□ -0.53
HDAC8-212ENST00000421523 WDR62O43379 1518 aa11.71□□□□□ -0.53
HDAC8-212ENST00000421523 BAZ1BQ9UIG0 1483 aaKnown RBP11.71□□□□□ -0.53
HDAC8-212ENST00000421523 ARHGEF11O15085 1522 aa11.69□□□□□ -0.54
HDAC8-212ENST00000421523 SMARCA4P51532 1647 aa11.67□□□□□ -0.54
HDAC8-212ENST00000421523 CYB5RLQ6IPT4 315 aa11.65□□□□□ -0.54
HDAC8-212ENST00000421523 CADPSQ9ULU8 1353 aa11.55□□□□□ -0.56
HDAC8-212ENST00000421523 ILDR1Q86SU0 546 aaPredicted RBP11.55□□□□□ -0.56
HDAC8-212ENST00000421523 CEP164Q9UPV0 1460 aa11.55□□□□□ -0.56
HDAC8-212ENST00000421523 ARAP1Q96P48 1450 aa11.53□□□□□ -0.56
HDAC8-212ENST00000421523 PEG3Q9GZU2 1588 aa11.5□□□□□ -0.57
HDAC8-212ENST00000421523 FANCD2Q9BXW9 1451 aa11.47□□□□□ -0.57
HDAC8-212ENST00000421523 URB2Q14146 1524 aaKnown RBP11.42□□□□□ -0.58
HDAC8-212ENST00000421523 ZNF608Q9ULD9 1512 aaPredicted RBP11.41□□□□□ -0.58
HDAC8-212ENST00000421523 MROH2BQ7Z745 1585 aa11.37□□□□□ -0.59
HDAC8-212ENST00000421523 CHD1O14646 1710 aa11.37□□□□□ -0.59
HDAC8-212ENST00000421523 RSF1Q96T23 1441 aaPredicted RBP11.35□□□□□ -0.59
HDAC8-212ENST00000421523 EIF4G3O43432 1585 aaKnown RBP11.33□□□□□ -0.6
HDAC8-212ENST00000421523 FBLN2P98095 1184 aa11.32□□□□□ -0.6
HDAC8-212ENST00000421523 IFT140Q96RY7 1462 aa11.32□□□□□ -0.6
HDAC8-212ENST00000421523 CFTRP13569 1480 aa11.28□□□□□ -0.6
HDAC8-212ENST00000421523 WIZO95785 1651 aa11.23□□□□□ -0.61
HDAC8-212ENST00000421523 AQRO60306 1485 aaKnown RBP eCLIP11.22□□□□□ -0.61
HDAC8-212ENST00000421523 CLASP1Q7Z460 1538 aa11.19□□□□□ -0.62
HDAC8-212ENST00000421523 TOPBP1Q92547 1522 aa11.17□□□□□ -0.62
HDAC8-212ENST00000421523 KDM4FA0A1W2PPD8 638 aa11.14□□□□□ -0.63
HDAC8-212ENST00000421523 GAPVD1Q14C86 1478 aa11.13□□□□□ -0.63
HDAC8-212ENST00000421523 PRDM2Q13029 1718 aa11.13□□□□□ -0.63
HDAC8-212ENST00000421523 TARBP1Q13395 1621 aaKnown RBP11.12□□□□□ -0.63
HDAC8-212ENST00000421523 SYNJ1O43426 1573 aa11.11□□□□□ -0.63
HDAC8-212ENST00000421523 SNAPC4Q5SXM2 1469 aa11.09□□□□□ -0.63
HDAC8-212ENST00000421523 KIF13AQ9H1H9 1805 aa11.07□□□□□ -0.64
HDAC8-212ENST00000421523 CHMP7Q8WUX9 453 aaPredicted RBP11.07□□□□□ -0.64
HDAC8-212ENST00000421523 DNMBPQ6XZF7 1577 aa11.06□□□□□ -0.64
HDAC8-212ENST00000421523 TDRD9Q8NDG6 1382 aaKnown RBP11.03□□□□□ -0.64
HDAC8-212ENST00000421523 ABCC8Q09428 1581 aa11.03□□□□□ -0.64
HDAC8-212ENST00000421523 ERCC6L2Q5T890 1561 aa11.02□□□□□ -0.65
HDAC8-212ENST00000421523 POLA1P09884 1462 aaPredicted RBP11.01□□□□□ -0.65
HDAC8-212ENST00000421523 RAD54L2Q9Y4B4 1467 aa11.01□□□□□ -0.65
HDAC8-212ENST00000421523 HECW2Q9P2P5 1572 aa11.01□□□□□ -0.65
HDAC8-212ENST00000421523 TOP2AP11388 1531 aaKnown RBP11□□□□□ -0.65
HDAC8-212ENST00000421523 KDM6BO15054 1643 aa10.98□□□□□ -0.65
HDAC8-212ENST00000421523 MAGI1Q96QZ7 1491 aaPredicted RBP10.98□□□□□ -0.65
HDAC8-212ENST00000421523 FBXO41Q8TF61 875 aa10.97□□□□□ -0.65
HDAC8-212ENST00000421523 SYNJ2O15056 1496 aa10.97□□□□□ -0.65
HDAC8-212ENST00000421523 LMTK3Q96Q04 1460 aa10.96□□□□□ -0.65
HDAC8-212ENST00000421523 FAM69CQ0P6D2 419 aa10.94□□□□□ -0.66
HDAC8-212ENST00000421523 ADGRL1O94910 1474 aa10.93□□□□□ -0.66
HDAC8-212ENST00000421523 SOGA1O94964 1423 aa10.93□□□□□ -0.66
HDAC8-212ENST00000421523 GRIN2BQ13224 1484 aa10.92□□□□□ -0.66
HDAC8-212ENST00000421523 SENP3Q9H4L4 574 aaPredicted RBP10.91□□□□□ -0.66
HDAC8-212ENST00000421523 WDR97A6NE52 1622 aa10.9□□□□□ -0.66
HDAC8-212ENST00000421523 CCDC88BA6NC98 1476 aa10.89□□□□□ -0.67
HDAC8-212ENST00000421523 ABCC10Q5T3U5 1492 aa10.89□□□□□ -0.67
HDAC8-212ENST00000421523 CEP170Q5SW79 1584 aa10.89□□□□□ -0.67
HDAC8-212ENST00000421523 TSPOAP1O95153 1857 aa10.88□□□□□ -0.67
HDAC8-212ENST00000421523 DIP2BQ9P265 1576 aa10.87□□□□□ -0.67
HDAC8-212ENST00000421523 PBRM1Q86U86 1689 aa10.87□□□□□ -0.67
HDAC8-212ENST00000421523 FGD5Q6ZNL6 1462 aa10.86□□□□□ -0.67
HDAC8-212ENST00000421523 SOCS7O14512 581 aa10.83□□□□□ -0.68
HDAC8-212ENST00000421523 ILDR2Q71H61 639 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms