RNA–Protein interactions for RNA: ENST00000421431.1

UBL4A-204, Transcript of ubiquitin like 4A, humanhuman

TSL 5

Gene UBL4A, Length 1,652 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4A-204ENST00000421431 NISCHQ9Y2I1 1504 aa36.92■■■■□ 3.5
UBL4A-204ENST00000421431 CCDC180Q9P1Z9 1646 aa32.32■■■□□ 2.76
UBL4A-204ENST00000421431 ABCC9O60706 1549 aa31.88■■■□□ 2.69
UBL4A-204ENST00000421431 ZCCHC6Q5VYS8 1495 aaKnown RBP30.98■■■□□ 2.55
UBL4A-204ENST00000421431 DCAF1Q9Y4B6 1507 aa30.54■■■□□ 2.48
UBL4A-204ENST00000421431 DCAF8L2P0C7V8 631 aa30.48■■■□□ 2.47
UBL4A-204ENST00000421431 MYO15BQ96JP2 1530 aa30.3■■■□□ 2.44
UBL4A-204ENST00000421431 RB1CC1Q8TDY2 1594 aa30.25■■■□□ 2.43
UBL4A-204ENST00000421431 NACADO15069 1562 aa30.17■■■□□ 2.42
UBL4A-204ENST00000421431 DNAJC5BQ9UF47 199 aa29.93■■■□□ 2.38
UBL4A-204ENST00000421431 SHROOM4Q9ULL8 1493 aa29.87■■■□□ 2.37
UBL4A-204ENST00000421431 UNC13AQ9UPW8 1703 aa29.76■■■□□ 2.36
UBL4A-204ENST00000421431 PABPN1Q86U42 306 aaKnown RBP eCLIP29.67■■■□□ 2.34
UBL4A-204ENST00000421431 SCRIBQ14160 1630 aa29.67■■■□□ 2.34
UBL4A-204ENST00000421431 BICRAQ9NZM4 1560 aa29.49■■■□□ 2.31
UBL4A-204ENST00000421431 CC2D2AQ9P2K1 1620 aa28.8■■■□□ 2.2
UBL4A-204ENST00000421431 CECR2Q9BXF3 1484 aa28.73■■■□□ 2.19
UBL4A-204ENST00000421431 EIF4G1Q04637 1599 aaKnown RBP28.71■■■□□ 2.19
UBL4A-204ENST00000421431 SUPT5HO00267 1087 aaKnown RBP28.56■■■□□ 2.16
UBL4A-204ENST00000421431 RSF1Q96T23 1441 aaPredicted RBP28.54■■■□□ 2.16
UBL4A-204ENST00000421431 MROH2BQ7Z745 1585 aa28.52■■■□□ 2.16
UBL4A-204ENST00000421431 BAZ1AQ9NRL2 1556 aaPredicted RBP28.51■■■□□ 2.15
UBL4A-204ENST00000421431 SMARCA4P51532 1647 aa28.43■■■□□ 2.14
UBL4A-204ENST00000421431 WIZO95785 1651 aa28.25■■■□□ 2.11
UBL4A-204ENST00000421431 PEG3Q9GZU2 1588 aa28.13■■■□□ 2.09
UBL4A-204ENST00000421431 ATAD2BQ9ULI0 1458 aa28.06■■■□□ 2.08
UBL4A-204ENST00000421431 SMARCA2P51531 1590 aa28.01■■■□□ 2.07
UBL4A-204ENST00000421431 TOP2AP11388 1531 aaKnown RBP27.97■■■□□ 2.07
UBL4A-204ENST00000421431 NCAPD3P42695 1498 aa27.87■■■□□ 2.05
UBL4A-204ENST00000421431 BAZ1BQ9UIG0 1483 aaKnown RBP27.85■■■□□ 2.05
UBL4A-204ENST00000421431 HMGXB3Q12766 1538 aa27.8■■■□□ 2.04
UBL4A-204ENST00000421431 CCDC88BA6NC98 1476 aa27.67■■■□□ 2.02
UBL4A-204ENST00000421431 ERCC6Q03468 1493 aa27.44■■□□□ 1.98
UBL4A-204ENST00000421431 NESP48681 1621 aa27.43■■□□□ 1.98
UBL4A-204ENST00000421431 CUX2O14529 1486 aa27.35■■□□□ 1.97
UBL4A-204ENST00000421431 DNAJC5Q9H3Z4 198 aa27.35■■□□□ 1.97
UBL4A-204ENST00000421431 CHIC1Q5VXU3 224 aa27.22■■□□□ 1.95
UBL4A-204ENST00000421431 CFTRP13569 1480 aa27.17■■□□□ 1.94
UBL4A-204ENST00000421431 THOC2Q8NI27 1593 aaKnown RBP27.13■■□□□ 1.93
UBL4A-204ENST00000421431 CADPSQ9ULU8 1353 aa27.12■■□□□ 1.93
UBL4A-204ENST00000421431 LAMC3Q9Y6N6 1575 aa27.11■■□□□ 1.93
UBL4A-204ENST00000421431 KIF21AQ7Z4S6 1674 aa27.1■■□□□ 1.93
UBL4A-204ENST00000421431 ABCC8Q09428 1581 aa26.99■■□□□ 1.91
UBL4A-204ENST00000421431 PRDM2Q13029 1718 aa26.94■■□□□ 1.9
UBL4A-204ENST00000421431 PDS5BQ9NTI5 1447 aa26.9■■□□□ 1.9
UBL4A-204ENST00000421431 TRIM41Q8WV44 630 aa26.86■■□□□ 1.89
UBL4A-204ENST00000421431 WRNQ14191 1432 aaPredicted RBP eCLIP26.85■■□□□ 1.89
UBL4A-204ENST00000421431 FANCD2Q9BXW9 1451 aa26.81■■□□□ 1.88
UBL4A-204ENST00000421431 SYNJ1O43426 1573 aa26.77■■□□□ 1.88
UBL4A-204ENST00000421431 MRC2Q9UBG0 1479 aa26.73■■□□□ 1.87
UBL4A-204ENST00000421431 WDR62O43379 1518 aa26.69■■□□□ 1.86
UBL4A-204ENST00000421431 CUX1P39880 1505 aa26.69■■□□□ 1.86
UBL4A-204ENST00000421431 CEP164Q9UPV0 1460 aa26.67■■□□□ 1.86
UBL4A-204ENST00000421431 TOP2BQ02880 1626 aa26.67■■□□□ 1.86
UBL4A-204ENST00000421431 BIVM-ERCC5R4GMW8 1640 aa26.65■■□□□ 1.86
UBL4A-204ENST00000421431 URB2Q14146 1524 aaKnown RBP26.53■■□□□ 1.84
UBL4A-204ENST00000421431 DNMBPQ6XZF7 1577 aa26.52■■□□□ 1.84
UBL4A-204ENST00000421431 TOPBP1Q92547 1522 aa26.51■■□□□ 1.83
UBL4A-204ENST00000421431 FGD5Q6ZNL6 1462 aa26.43■■□□□ 1.82
UBL4A-204ENST00000421431 SOGA1O94964 1423 aa26.43■■□□□ 1.82
UBL4A-204ENST00000421431 FAM9AQ8IZU1 332 aaPredicted RBP26.36■■□□□ 1.81
UBL4A-204ENST00000421431 RUSC2Q8N2Y8 1516 aa26.36■■□□□ 1.81
UBL4A-204ENST00000421431 POLA1P09884 1462 aaPredicted RBP26.35■■□□□ 1.81
UBL4A-204ENST00000421431 EEA1Q15075 1411 aa26.28■■□□□ 1.8
UBL4A-204ENST00000421431 RAD54L2Q9Y4B4 1467 aa26.26■■□□□ 1.79
UBL4A-204ENST00000421431 ABCA10Q8WWZ4 1543 aa26.2■■□□□ 1.78
UBL4A-204ENST00000421431 KIF27Q86VH2 1401 aa26.17■■□□□ 1.78
UBL4A-204ENST00000421431 CSRNP3Q8WYN3 585 aa26.16■■□□□ 1.78
UBL4A-204ENST00000421431 LOC105371045A0A1W2PR82 267 aa26.15■■□□□ 1.78
UBL4A-204ENST00000421431 ZNF608Q9ULD9 1512 aaPredicted RBP26.15■■□□□ 1.78
UBL4A-204ENST00000421431 WDR97A6NE52 1622 aa26.14■■□□□ 1.78
UBL4A-204ENST00000421431 TARBP1Q13395 1621 aaKnown RBP26.14■■□□□ 1.77
UBL4A-204ENST00000421431 OSCARQ8IYS5 282 aa26.08■■□□□ 1.77
UBL4A-204ENST00000421431 IFT140Q96RY7 1462 aa26.06■■□□□ 1.76
UBL4A-204ENST00000421431 TDRD9Q8NDG6 1382 aaKnown RBP26.02■■□□□ 1.76
UBL4A-204ENST00000421431 ABCA5Q8WWZ7 1642 aa26.02■■□□□ 1.76
UBL4A-204ENST00000421431 IGF1RP08069 1367 aa26■■□□□ 1.75
UBL4A-204ENST00000421431 EIF4G3O43432 1585 aaKnown RBP26■■□□□ 1.75
UBL4A-204ENST00000421431 EHMT2Q96KQ7 1210 aa25.99■■□□□ 1.75
UBL4A-204ENST00000421431 KIF21BO75037 1637 aa25.97■■□□□ 1.75
UBL4A-204ENST00000421431 PRXQ9BXM0 1461 aa25.97■■□□□ 1.75
UBL4A-204ENST00000421431 GAPVD1Q14C86 1478 aa25.95■■□□□ 1.74
UBL4A-204ENST00000421431 AQRO60306 1485 aaKnown RBP eCLIP25.91■■□□□ 1.746e-6■■■■□ 25.1
UBL4A-204ENST00000421431 GOLGA3Q08378 1498 aa25.91■■□□□ 1.74
UBL4A-204ENST00000421431 RAPGEF2Q9Y4G8 1499 aa25.9■■□□□ 1.74
UBL4A-204ENST00000421431 RIMBP3CA6NJZ7 1639 aa25.9■■□□□ 1.74
UBL4A-204ENST00000421431 RIMBP3BA6NNM3 1639 aa25.9■■□□□ 1.74
UBL4A-204ENST00000421431 RIMBP3Q9UFD9 1639 aa25.9■■□□□ 1.74
UBL4A-204ENST00000421431 ERICH3Q5RHP9 1530 aa25.87■■□□□ 1.73
UBL4A-204ENST00000421431 CHD1O14646 1710 aa25.85■■□□□ 1.73
UBL4A-204ENST00000421431 CARMIL1Q5VZK9 1371 aa25.84■■□□□ 1.73
UBL4A-204ENST00000421431 PBRM1Q86U86 1689 aa25.81■■□□□ 1.72
UBL4A-204ENST00000421431 CUL7Q14999 1698 aa25.8■■□□□ 1.72
UBL4A-204ENST00000421431 GRIN2BQ13224 1484 aa25.79■■□□□ 1.72
UBL4A-204ENST00000421431 TNIKQ9UKE5 1360 aa25.78■■□□□ 1.72
UBL4A-204ENST00000421431 ARHGEF11O15085 1522 aa25.77■■□□□ 1.72
UBL4A-204ENST00000421431 UBTFP17480 764 aaKnown RBP25.76■■□□□ 1.71
UBL4A-204ENST00000421431 ADAMTS12P58397 1594 aa25.7■■□□□ 1.7
UBL4A-204ENST00000421431 SNAPC4Q5SXM2 1469 aa25.67■■□□□ 1.7
UBL4A-204ENST00000421431 FHAD1B1AJZ9 1412 aa25.67■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms