RNA–Protein interactions for RNA: ENST00000420940.6

WDR48-203, Transcript of WD repeat domain 48, humanhuman

TSL 1 (best)

Gene WDR48, Length 3,772 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
WDR48-203ENST00000420940 NISCHQ9Y2I1 1504 aa12.95□□□□□ -0.34
WDR48-203ENST00000420940 AEBP2Q6ZN18 517 aaPredicted RBP11.6□□□□□ -0.55
WDR48-203ENST00000420940 CHIC1Q5VXU3 224 aa11.43□□□□□ -0.58
WDR48-203ENST00000420940 CCDC180Q9P1Z9 1646 aa11.21□□□□□ -0.61
WDR48-203ENST00000420940 ZCCHC6Q5VYS8 1495 aaKnown RBP11.02□□□□□ -0.64
WDR48-203ENST00000420940 DCAF1Q9Y4B6 1507 aa10.74□□□□□ -0.69
WDR48-203ENST00000420940 SHROOM4Q9ULL8 1493 aa10.55□□□□□ -0.72
WDR48-203ENST00000420940 MYO15BQ96JP2 1530 aa10.53□□□□□ -0.72
WDR48-203ENST00000420940 UNC13AQ9UPW8 1703 aa10.51□□□□□ -0.73
WDR48-203ENST00000420940 ABCC9O60706 1549 aa10.43□□□□□ -0.74
WDR48-203ENST00000420940 SCRIBQ14160 1630 aa10.27□□□□□ -0.77
WDR48-203ENST00000420940 EIF4G1Q04637 1599 aaKnown RBP10.23□□□□□ -0.77
WDR48-203ENST00000420940 NACADO15069 1562 aa10.17□□□□□ -0.78
WDR48-203ENST00000420940 RSF1Q96T23 1441 aaPredicted RBP10.17□□□□□ -0.78
WDR48-203ENST00000420940 RB1CC1Q8TDY2 1594 aa10.17□□□□□ -0.78
WDR48-203ENST00000420940 PHF23Q9BUL5 403 aaPredicted RBP10.15□□□□□ -0.78
WDR48-203ENST00000420940 SUPT5HO00267 1087 aaKnown RBP10.13□□□□□ -0.79
WDR48-203ENST00000420940 CECR2Q9BXF3 1484 aa10.11□□□□□ -0.79
WDR48-203ENST00000420940 MROH2BQ7Z745 1585 aa10.1□□□□□ -0.79
WDR48-203ENST00000420940 BICRAQ9NZM4 1560 aa10.09□□□□□ -0.79
WDR48-203ENST00000420940 WIZO95785 1651 aa10.09□□□□□ -0.79
WDR48-203ENST00000420940 BAZ1AQ9NRL2 1556 aaPredicted RBP10.02□□□□□ -0.81
WDR48-203ENST00000420940 SMARCA4P51532 1647 aa9.93□□□□□ -0.82
WDR48-203ENST00000420940 DCAF8L2P0C7V8 631 aa9.92□□□□□ -0.82
WDR48-203ENST00000420940 PEG3Q9GZU2 1588 aa9.89□□□□□ -0.83
WDR48-203ENST00000420940 SMARCA2P51531 1590 aa9.88□□□□□ -0.83
WDR48-203ENST00000420940 TOP2AP11388 1531 aaKnown RBP9.85□□□□□ -0.83
WDR48-203ENST00000420940 HRCP23327 699 aa9.76□□□□□ -0.85
WDR48-203ENST00000420940 CCDC88BA6NC98 1476 aa9.75□□□□□ -0.85
WDR48-203ENST00000420940 LOC105371045A0A1W2PR82 267 aa9.75□□□□□ -0.85
WDR48-203ENST00000420940 ABCC8Q09428 1581 aa9.73□□□□□ -0.85
WDR48-203ENST00000420940 SENP3Q9H4L4 574 aaPredicted RBP9.73□□□□□ -0.85
WDR48-203ENST00000420940 SYNJ1O43426 1573 aa9.64□□□□□ -0.87
WDR48-203ENST00000420940 PRDM2Q13029 1718 aa9.61□□□□□ -0.87
WDR48-203ENST00000420940 RUSC2Q8N2Y8 1516 aa9.61□□□□□ -0.87
WDR48-203ENST00000420940 DNAJC5BQ9UF47 199 aa9.6□□□□□ -0.87
WDR48-203ENST00000420940 ATAD2BQ9ULI0 1458 aa9.59□□□□□ -0.87
WDR48-203ENST00000420940 BIVM-ERCC5R4GMW8 1640 aa9.56□□□□□ -0.88
WDR48-203ENST00000420940 SOGA1O94964 1423 aa9.54□□□□□ -0.88
WDR48-203ENST00000420940 DNAJC5Q9H3Z4 198 aa9.54□□□□□ -0.88
WDR48-203ENST00000420940 HMGXB3Q12766 1538 aa9.49□□□□□ -0.89
WDR48-203ENST00000420940 TOP2BQ02880 1626 aa9.49□□□□□ -0.89
WDR48-203ENST00000420940 KIF21BO75037 1637 aa9.48□□□□□ -0.89
WDR48-203ENST00000420940 WRNQ14191 1432 aaPredicted RBP eCLIP9.47□□□□□ -0.891e-7■■■■■ 66.8
WDR48-203ENST00000420940 PCGF6Q9BYE7 350 aa9.46□□□□□ -0.89
WDR48-203ENST00000420940 PPARGC1BQ86YN6 1023 aaKnown RBP9.46□□□□□ -0.89
WDR48-203ENST00000420940 PLPPR3Q6T4P5 718 aa9.45□□□□□ -0.9
WDR48-203ENST00000420940 PABPN1Q86U42 306 aaKnown RBP eCLIP9.44□□□□□ -0.92e-8■■■□□ 17.7
WDR48-203ENST00000420940 TRIM41Q8WV44 630 aa9.44□□□□□ -0.9
WDR48-203ENST00000420940 CUX2O14529 1486 aa9.43□□□□□ -0.9
WDR48-203ENST00000420940 NCAPD3P42695 1498 aa9.42□□□□□ -0.9
WDR48-203ENST00000420940 CUX1P39880 1505 aa9.41□□□□□ -0.9
WDR48-203ENST00000420940 BAZ1BQ9UIG0 1483 aaKnown RBP9.39□□□□□ -0.91
WDR48-203ENST00000420940 TRIM26Q12899 539 aaPredicted RBP9.37□□□□□ -0.91
WDR48-203ENST00000420940 CEP162Q5TB80 1403 aa9.35□□□□□ -0.91
WDR48-203ENST00000420940 CFTRP13569 1480 aa9.34□□□□□ -0.91
WDR48-203ENST00000420940 TNIKQ9UKE5 1360 aa9.33□□□□□ -0.92
WDR48-203ENST00000420940 RAPGEF2Q9Y4G8 1499 aa9.32□□□□□ -0.92
WDR48-203ENST00000420940 PRXQ9BXM0 1461 aa9.32□□□□□ -0.92
WDR48-203ENST00000420940 WDR97A6NE52 1622 aa9.32□□□□□ -0.92
WDR48-203ENST00000420940 FAM9AQ8IZU1 332 aaPredicted RBP9.3□□□□□ -0.92
WDR48-203ENST00000420940 EEA1Q15075 1411 aa9.3□□□□□ -0.92
WDR48-203ENST00000420940 CC2D2AQ9P2K1 1620 aa9.3□□□□□ -0.92
WDR48-203ENST00000420940 ERICH3Q5RHP9 1530 aa9.28□□□□□ -0.92
WDR48-203ENST00000420940 ARAP1Q96P48 1450 aa9.27□□□□□ -0.93
WDR48-203ENST00000420940 GOLGA3Q08378 1498 aa9.27□□□□□ -0.93
WDR48-203ENST00000420940 LRRIQ1Q96JM4 1722 aa9.25□□□□□ -0.93
WDR48-203ENST00000420940 CEP164Q9UPV0 1460 aa9.23□□□□□ -0.93
WDR48-203ENST00000420940 CLIP1P30622 1438 aa9.2□□□□□ -0.94
WDR48-203ENST00000420940 CSRNP3Q8WYN3 585 aa9.18□□□□□ -0.94
WDR48-203ENST00000420940 THOC2Q8NI27 1593 aaKnown RBP9.17□□□□□ -0.94
WDR48-203ENST00000420940 VPS8Q8N3P4 1428 aa9.15□□□□□ -0.94
WDR48-203ENST00000420940 EHMT2Q96KQ7 1210 aa9.15□□□□□ -0.95
WDR48-203ENST00000420940 ARHGAP35Q9NRY4 1499 aa9.14□□□□□ -0.95
WDR48-203ENST00000420940 ABCA5Q8WWZ7 1642 aa9.13□□□□□ -0.95
WDR48-203ENST00000420940 CFAP43Q8NDM7 1665 aa9.13□□□□□ -0.95
WDR48-203ENST00000420940 ADRA2BP18089 450 aa9.13□□□□□ -0.95
WDR48-203ENST00000420940 KIF21AQ7Z4S6 1674 aa9.12□□□□□ -0.95
WDR48-203ENST00000420940 ZEB1P37275 1124 aaPredicted RBP9.12□□□□□ -0.95
WDR48-203ENST00000420940 NESP48681 1621 aa9.11□□□□□ -0.95
WDR48-203ENST00000420940 FGD5Q6ZNL6 1462 aa9.1□□□□□ -0.95
WDR48-203ENST00000420940 FOXD1Q16676 465 aa9.1□□□□□ -0.95
WDR48-203ENST00000420940 TARBP1Q13395 1621 aaKnown RBP9.1□□□□□ -0.95
WDR48-203ENST00000420940 DNMBPQ6XZF7 1577 aa9.1□□□□□ -0.95
WDR48-203ENST00000420940 CTTNBP2Q8WZ74 1663 aa9.09□□□□□ -0.95
WDR48-203ENST00000420940 SCAF1Q9H7N4 1312 aaKnown RBP9.09□□□□□ -0.95
WDR48-203ENST00000420940 URB2Q14146 1524 aaKnown RBP9.08□□□□□ -0.96
WDR48-203ENST00000420940 IGF1RP08069 1367 aa9.08□□□□□ -0.96
WDR48-203ENST00000420940 CADPSQ9ULU8 1353 aa9.07□□□□□ -0.96
WDR48-203ENST00000420940 ABCA10Q8WWZ4 1543 aa9.06□□□□□ -0.96
WDR48-203ENST00000420940 SAMD9Q5K651 1589 aa9.06□□□□□ -0.96
WDR48-203ENST00000420940 POLA1P09884 1462 aaPredicted RBP9.05□□□□□ -0.96
WDR48-203ENST00000420940 TOPBP1Q92547 1522 aa9.05□□□□□ -0.96
WDR48-203ENST00000420940 RRBP1Q9P2E9 1410 aaKnown RBP9.04□□□□□ -0.96
WDR48-203ENST00000420940 PCF11O94913 1555 aaKnown RBP9.04□□□□□ -0.96
WDR48-203ENST00000420940 TIAM1Q13009 1591 aa9.03□□□□□ -0.96
WDR48-203ENST00000420940 PPP6R1Q9UPN7 881 aa9.03□□□□□ -0.96
WDR48-203ENST00000420940 MAP3K1Q13233 1512 aa9.03□□□□□ -0.96
WDR48-203ENST00000420940 LAMC3Q9Y6N6 1575 aa9.03□□□□□ -0.96
WDR48-203ENST00000420940 FANCD2Q9BXW9 1451 aa9.02□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms